RNA–Protein interactions for RNA: ENST00000477945.1

SRRD-203, Transcript of SRR1 domain containing, humanhuman

TSL 5

Gene SRRD, Length 607 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-203ENST00000477945 ABCA5Q8WWZ7 1642 aa9.64□□□□□ -0.87
SRRD-203ENST00000477945 RAD54L2Q9Y4B4 1467 aa9.62□□□□□ -0.87
SRRD-203ENST00000477945 RNF216Q9NWF9 866 aaPredicted RBP9.61□□□□□ -0.87
SRRD-203ENST00000477945 ARHGAP35Q9NRY4 1499 aa9.6□□□□□ -0.87
SRRD-203ENST00000477945 PPARGC1BQ86YN6 1023 aaKnown RBP9.6□□□□□ -0.87
SRRD-203ENST00000477945 TARBP1Q13395 1621 aaKnown RBP9.6□□□□□ -0.87
SRRD-203ENST00000477945 CTTNBP2Q8WZ74 1663 aa9.59□□□□□ -0.87
SRRD-203ENST00000477945 MAP3K1Q13233 1512 aa9.58□□□□□ -0.88
SRRD-203ENST00000477945 APLP2Q06481 763 aa9.58□□□□□ -0.88
SRRD-203ENST00000477945 MRC2Q9UBG0 1479 aa9.58□□□□□ -0.88
SRRD-203ENST00000477945 EFCAB5A4FU69 1503 aa9.57□□□□□ -0.88
SRRD-203ENST00000477945 DNAJC5BQ9UF47 199 aa9.57□□□□□ -0.88
SRRD-203ENST00000477945 GAPVD1Q14C86 1478 aa9.56□□□□□ -0.88
SRRD-203ENST00000477945 WDR62O43379 1518 aa9.54□□□□□ -0.88
SRRD-203ENST00000477945 PBRM1Q86U86 1689 aa9.54□□□□□ -0.88
SRRD-203ENST00000477945 HOXD11P31277 338 aaPredicted RBP9.53□□□□□ -0.88
SRRD-203ENST00000477945 FHAD1B1AJZ9 1412 aa9.53□□□□□ -0.88
SRRD-203ENST00000477945 AQRO60306 1485 aaKnown RBP eCLIP9.51□□□□□ -0.89
SRRD-203ENST00000477945 TIAM1Q13009 1591 aa9.5□□□□□ -0.89
SRRD-203ENST00000477945 IFT140Q96RY7 1462 aa9.5□□□□□ -0.89
SRRD-203ENST00000477945 CFAP43Q8NDM7 1665 aa9.5□□□□□ -0.89
SRRD-203ENST00000477945 SAMD9Q5K651 1589 aa9.5□□□□□ -0.89
SRRD-203ENST00000477945 TDRD9Q8NDG6 1382 aaKnown RBP9.5□□□□□ -0.89
SRRD-203ENST00000477945 ZBTB22O15209 634 aa9.49□□□□□ -0.89
SRRD-203ENST00000477945 RANGAP1P46060 587 aaPredicted RBP9.49□□□□□ -0.89
SRRD-203ENST00000477945 ADAMTS12P58397 1594 aa9.49□□□□□ -0.89
SRRD-203ENST00000477945 RRBP1Q9P2E9 1410 aaKnown RBP9.48□□□□□ -0.89
SRRD-203ENST00000477945 FYCO1Q9BQS8 1478 aa9.48□□□□□ -0.89
SRRD-203ENST00000477945 PCF11O94913 1555 aaKnown RBP9.47□□□□□ -0.89
SRRD-203ENST00000477945 TTBK1Q5TCY1 1321 aaPredicted RBP9.47□□□□□ -0.89
SRRD-203ENST00000477945 GRIN2BQ13224 1484 aa9.47□□□□□ -0.89
SRRD-203ENST00000477945 THOC2Q8NI27 1593 aaKnown RBP9.46□□□□□ -0.89
SRRD-203ENST00000477945 CASKIN1Q8WXD9 1431 aa9.46□□□□□ -0.9
SRRD-203ENST00000477945 CCER1Q8TC90 406 aaPredicted RBP9.45□□□□□ -0.9
SRRD-203ENST00000477945 FMN1Q68DA7 1419 aa9.45□□□□□ -0.9
SRRD-203ENST00000477945 KANK4Q5T7N3 995 aaPredicted RBP9.44□□□□□ -0.9
SRRD-203ENST00000477945 LRRC9Q6ZRR7 1453 aa9.44□□□□□ -0.9
SRRD-203ENST00000477945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.43□□□□□ -0.9
SRRD-203ENST00000477945 SNAPC4Q5SXM2 1469 aa9.42□□□□□ -0.9
SRRD-203ENST00000477945 FHOD3Q2V2M9 1422 aa9.42□□□□□ -0.9
SRRD-203ENST00000477945 IQGAP2Q13576 1575 aa9.41□□□□□ -0.9
SRRD-203ENST00000477945 ERCC6Q03468 1493 aa9.41□□□□□ -0.9
SRRD-203ENST00000477945 EIF4G3O43432 1585 aaKnown RBP9.41□□□□□ -0.9
SRRD-203ENST00000477945 CCNB3Q8WWL7 1395 aa9.39□□□□□ -0.91
SRRD-203ENST00000477945 UGGT2Q9NYU1 1516 aa9.39□□□□□ -0.91
SRRD-203ENST00000477945 ZNF608Q9ULD9 1512 aaPredicted RBP9.39□□□□□ -0.91
SRRD-203ENST00000477945 MAGI1Q96QZ7 1491 aaPredicted RBP9.39□□□□□ -0.91
SRRD-203ENST00000477945 CLSPNQ9HAW4 1339 aa9.37□□□□□ -0.91
SRRD-203ENST00000477945 HNRNPUL2Q1KMD3 747 aaKnown RBP9.37□□□□□ -0.91
SRRD-203ENST00000477945 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.37□□□□□ -0.91
SRRD-203ENST00000477945 LRRIQ1Q96JM4 1722 aa9.36□□□□□ -0.91
SRRD-203ENST00000477945 KIAA0586Q9BVV6 1533 aa9.36□□□□□ -0.91
SRRD-203ENST00000477945 GRIN2AQ12879 1464 aa9.35□□□□□ -0.91
SRRD-203ENST00000477945 CCDC18Q5T9S5 1454 aa9.35□□□□□ -0.91
SRRD-203ENST00000477945 HECW1Q76N89 1606 aa9.34□□□□□ -0.91
SRRD-203ENST00000477945 P3H3Q8IVL6 736 aa9.34□□□□□ -0.91
SRRD-203ENST00000477945 EHBP1L1Q8N3D4 1523 aa9.34□□□□□ -0.91
SRRD-203ENST00000477945 PHLDB1Q86UU1 1377 aa9.33□□□□□ -0.92
SRRD-203ENST00000477945 SYNJ2O15056 1496 aa9.33□□□□□ -0.92
SRRD-203ENST00000477945 KIAA0556O60303 1618 aa9.32□□□□□ -0.92
SRRD-203ENST00000477945 SUPT6HQ7KZ85 1726 aaKnown RBP9.32□□□□□ -0.92
SRRD-203ENST00000477945 SLC4A2P04920 1241 aa9.32□□□□□ -0.92
SRRD-203ENST00000477945 ARHGEF11O15085 1522 aa9.31□□□□□ -0.92
SRRD-203ENST00000477945 DHX57Q6P158 1386 aaKnown RBP9.29□□□□□ -0.92
SRRD-203ENST00000477945 FOXD4L1Q9NU39 408 aa9.29□□□□□ -0.92
SRRD-203ENST00000477945 DISP1Q96F81 1524 aa9.29□□□□□ -0.92
SRRD-203ENST00000477945 NUP160Q12769 1436 aa9.29□□□□□ -0.92
SRRD-203ENST00000477945 CEP170Q5SW79 1584 aa9.29□□□□□ -0.92
SRRD-203ENST00000477945 MTUS2Q5JR59 1369 aa9.28□□□□□ -0.92
SRRD-203ENST00000477945 DCAF8L1A6NGE4 600 aa9.28□□□□□ -0.92
SRRD-203ENST00000477945 FGD6Q6ZV73 1430 aa9.28□□□□□ -0.92
SRRD-203ENST00000477945 EPRSP07814 1512 aaKnown RBP9.27□□□□□ -0.93
SRRD-203ENST00000477945 NCOA2Q15596 1464 aa9.27□□□□□ -0.93
SRRD-203ENST00000477945 MYOM3Q5VTT5 1437 aa9.26□□□□□ -0.93
SRRD-203ENST00000477945 SETD5Q9C0A6 1442 aa9.26□□□□□ -0.93
SRRD-203ENST00000477945 ATP1B4Q9UN42 357 aaPredicted RBP9.26□□□□□ -0.93
SRRD-203ENST00000477945 RAPGEF6Q8TEU7 1601 aa9.26□□□□□ -0.93
SRRD-203ENST00000477945 MAGI3Q5TCQ9 1506 aa9.25□□□□□ -0.93
SRRD-203ENST00000477945 TCOF1Q13428 1488 aaKnown RBP9.24□□□□□ -0.93
SRRD-203ENST00000477945 RAB3GAP2Q9H2M9 1393 aa9.24□□□□□ -0.93
SRRD-203ENST00000477945 CHMP7Q8WUX9 453 aaPredicted RBP9.23□□□□□ -0.93
SRRD-203ENST00000477945 PTPN23Q9H3S7 1636 aa9.23□□□□□ -0.93
SRRD-203ENST00000477945 CARMIL2Q6F5E8 1435 aa9.22□□□□□ -0.93
SRRD-203ENST00000477945 MIA2Q96PC5 1412 aa9.22□□□□□ -0.93
SRRD-203ENST00000477945 NUP153P49790 1475 aaKnown RBP9.21□□□□□ -0.93
SRRD-203ENST00000477945 FAM50AQ14320 339 aaKnown RBP9.21□□□□□ -0.94
SRRD-203ENST00000477945 CDK13Q14004 1512 aaKnown RBP9.21□□□□□ -0.94
SRRD-203ENST00000477945 HFM1A2PYH4 1435 aa9.2□□□□□ -0.94
SRRD-203ENST00000477945 AKNAQ7Z591 1439 aa9.2□□□□□ -0.94
SRRD-203ENST00000477945 MAPKBP1O60336 1514 aa9.2□□□□□ -0.94
SRRD-203ENST00000477945 ADCY10Q96PN6 1610 aa9.2□□□□□ -0.94
SRRD-203ENST00000477945 ZNF316A6NFI3 1004 aaPredicted RBP9.19□□□□□ -0.94
SRRD-203ENST00000477945 ABCA8O94911 1581 aa9.18□□□□□ -0.94
SRRD-203ENST00000477945 GCC2Q8IWJ2 1684 aa9.18□□□□□ -0.94
SRRD-203ENST00000477945 CHD1O14646 1710 aa9.17□□□□□ -0.94
SRRD-203ENST00000477945 ITGAEP38570 1179 aa9.17□□□□□ -0.94
SRRD-203ENST00000477945 JPH4Q96JJ6 628 aa9.17□□□□□ -0.94
SRRD-203ENST00000477945 ITSN2Q9NZM3 1697 aa9.16□□□□□ -0.94
SRRD-203ENST00000477945 SHROOM2Q13796 1616 aa9.16□□□□□ -0.94
SRRD-203ENST00000477945 CDK11AQ9UQ88 783 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms