RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 CADPSQ9ULU8 1353 aa18.94■□□□□ 0.62
DFFB-209ENST00000477548 RRBP1Q9P2E9 1410 aaKnown RBP18.89■□□□□ 0.61
DFFB-209ENST00000477548 FANCIQ9NVI1 1328 aa18.88■□□□□ 0.61
DFFB-209ENST00000477548 CUX2O14529 1486 aa18.87■□□□□ 0.61
DFFB-209ENST00000477548 NESP48681 1621 aa18.87■□□□□ 0.61
DFFB-209ENST00000477548 PRXQ9BXM0 1461 aa18.85■□□□□ 0.61
DFFB-209ENST00000477548 CDK11AQ9UQ88 783 aaPredicted RBP18.85■□□□□ 0.61
DFFB-209ENST00000477548 CCNB3Q8WWL7 1395 aa18.85■□□□□ 0.61
DFFB-209ENST00000477548 ANP32CO43423 234 aa18.84■□□□□ 0.61
DFFB-209ENST00000477548 CCER2I3L3R5 266 aa18.84■□□□□ 0.61
DFFB-209ENST00000477548 KIF27Q86VH2 1401 aa18.83■□□□□ 0.61
DFFB-209ENST00000477548 PPP1R15AO75807 674 aaPredicted RBP18.83■□□□□ 0.6
DFFB-209ENST00000477548 ARAP1Q96P48 1450 aa18.81■□□□□ 0.6
DFFB-209ENST00000477548 RAB3GAP2Q9H2M9 1393 aa18.81■□□□□ 0.6
DFFB-209ENST00000477548 PLEKHG5O94827 1062 aa18.79■□□□□ 0.6
DFFB-209ENST00000477548 MAPKBP1O60336 1514 aa18.78■□□□□ 0.6
DFFB-209ENST00000477548 MYT1LQ9UL68 1186 aa18.78■□□□□ 0.6
DFFB-209ENST00000477548 FGD5Q6ZNL6 1462 aa18.78■□□□□ 0.6
DFFB-209ENST00000477548 ANO8Q9HCE9 1232 aaPredicted RBP18.77■□□□□ 0.6
DFFB-209ENST00000477548 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.6
DFFB-209ENST00000477548 WDR97A6NE52 1622 aa18.77■□□□□ 0.59
DFFB-209ENST00000477548 HIRIP3Q9BW71 556 aaPredicted RBP18.77■□□□□ 0.59
DFFB-209ENST00000477548 PRDM2Q13029 1718 aa18.75■□□□□ 0.59
DFFB-209ENST00000477548 SIN3AQ96ST3 1273 aa18.75■□□□□ 0.59
DFFB-209ENST00000477548 IGF1RP08069 1367 aa18.74■□□□□ 0.59
DFFB-209ENST00000477548 IRX6P78412 446 aaPredicted RBP18.73■□□□□ 0.59
DFFB-209ENST00000477548 DEKP35659 375 aaKnown RBP18.72■□□□□ 0.59
DFFB-209ENST00000477548 ERICH3Q5RHP9 1530 aa18.72■□□□□ 0.59
DFFB-209ENST00000477548 RAD54L2Q9Y4B4 1467 aa18.71■□□□□ 0.59
DFFB-209ENST00000477548 SETD5Q9C0A6 1442 aa18.67■□□□□ 0.58
DFFB-209ENST00000477548 HNRNPUQ00839 825 aaKnown RBP eCLIP18.66■□□□□ 0.58
DFFB-209ENST00000477548 TIMELESSQ9UNS1 1208 aa18.63■□□□□ 0.57
DFFB-209ENST00000477548 CARMIL1Q5VZK9 1371 aa18.63■□□□□ 0.57
DFFB-209ENST00000477548 ARHGAP35Q9NRY4 1499 aa18.61■□□□□ 0.57
DFFB-209ENST00000477548 TOPBP1Q92547 1522 aa18.6■□□□□ 0.57
DFFB-209ENST00000477548 P3H3Q8IVL6 736 aa18.6■□□□□ 0.57
DFFB-209ENST00000477548 POLA1P09884 1462 aaPredicted RBP18.6■□□□□ 0.57
DFFB-209ENST00000477548 PPP4R2Q9NY27 417 aa18.58■□□□□ 0.56
DFFB-209ENST00000477548 FAM50AQ14320 339 aaKnown RBP18.56■□□□□ 0.56
DFFB-209ENST00000477548 UBE2Q2Q8WVN8 375 aa18.56■□□□□ 0.56
DFFB-209ENST00000477548 ERICH6BQ5W0A0 696 aa18.56■□□□□ 0.56
DFFB-209ENST00000477548 NBR1Q14596 966 aa18.55■□□□□ 0.56
DFFB-209ENST00000477548 DNMBPQ6XZF7 1577 aa18.55■□□□□ 0.56
DFFB-209ENST00000477548 URB2Q14146 1524 aaKnown RBP18.55■□□□□ 0.56
DFFB-209ENST00000477548 NOP58Q9Y2X3 529 aaKnown RBP18.53■□□□□ 0.56
DFFB-209ENST00000477548 TDRD9Q8NDG6 1382 aaKnown RBP18.52■□□□□ 0.55
DFFB-209ENST00000477548 TONSLQ96HA7 1378 aa18.48■□□□□ 0.55
DFFB-209ENST00000477548 B4GALNT3Q6L9W6 998 aa18.48■□□□□ 0.55
DFFB-209ENST00000477548 ABCA10Q8WWZ4 1543 aa18.48■□□□□ 0.55
DFFB-209ENST00000477548 LAMC3Q9Y6N6 1575 aa18.46■□□□□ 0.55
DFFB-209ENST00000477548 ATP1B4Q9UN42 357 aaPredicted RBP18.46■□□□□ 0.55
DFFB-209ENST00000477548 PHLDB1Q86UU1 1377 aa18.45■□□□□ 0.54
DFFB-209ENST00000477548 TIAM1Q13009 1591 aa18.44■□□□□ 0.54
DFFB-209ENST00000477548 PAK3O75914 559 aaPredicted RBP18.43■□□□□ 0.54
DFFB-209ENST00000477548 KIF21AQ7Z4S6 1674 aa18.42■□□□□ 0.54
DFFB-209ENST00000477548 LRRC9Q6ZRR7 1453 aa18.41■□□□□ 0.54
DFFB-209ENST00000477548 PDS5BQ9NTI5 1447 aa18.4■□□□□ 0.54
DFFB-209ENST00000477548 RTL5Q5HYW3 569 aaPredicted RBP18.4■□□□□ 0.54
DFFB-209ENST00000477548 FHOD3Q2V2M9 1422 aa18.39■□□□□ 0.53
DFFB-209ENST00000477548 MAP3K1Q13233 1512 aa18.39■□□□□ 0.53
DFFB-209ENST00000477548 PODXL2Q9NZ53 605 aa18.36■□□□□ 0.53
DFFB-209ENST00000477548 ANP32AP39687 249 aaKnown RBP18.34■□□□□ 0.53
DFFB-209ENST00000477548 FAM9BQ8IZU0 186 aa18.33■□□□□ 0.52
DFFB-209ENST00000477548 CCDC136Q96JN2 1154 aa18.33■□□□□ 0.52
DFFB-209ENST00000477548 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
DFFB-209ENST00000477548 GAPVD1Q14C86 1478 aa18.32■□□□□ 0.52
DFFB-209ENST00000477548 FHAD1B1AJZ9 1412 aa18.3■□□□□ 0.52
DFFB-209ENST00000477548 CCDC184Q52MB2 194 aa18.3■□□□□ 0.52
DFFB-209ENST00000477548 IPO9Q96P70 1041 aaKnown RBP18.3■□□□□ 0.52
DFFB-209ENST00000477548 WASHC2AQ641Q2 1341 aa18.3■□□□□ 0.52
DFFB-209ENST00000477548 ZBTB47Q9UFB7 747 aaPredicted RBP18.29■□□□□ 0.52
DFFB-209ENST00000477548 AQRO60306 1485 aaKnown RBP eCLIP18.28■□□□□ 0.528e-7■■■■■ 28.7
DFFB-209ENST00000477548 PCF11O94913 1555 aaKnown RBP18.28■□□□□ 0.52
DFFB-209ENST00000477548 ZBED9Q6R2W3 1325 aa18.27■□□□□ 0.52
DFFB-209ENST00000477548 ABCA5Q8WWZ7 1642 aa18.27■□□□□ 0.51
DFFB-209ENST00000477548 HSPA5P11021 654 aaKnown RBP18.26■□□□□ 0.51
DFFB-209ENST00000477548 MRS2Q9HD23 443 aa18.26■□□□□ 0.51
DFFB-209ENST00000477548 PKNOX2Q96KN3 472 aa18.25■□□□□ 0.51
DFFB-209ENST00000477548 CUL7Q14999 1698 aa18.24■□□□□ 0.51
DFFB-209ENST00000477548 IL27Q8NEV9 243 aa18.24■□□□□ 0.51
DFFB-209ENST00000477548 CCDC18Q5T9S5 1454 aa18.23■□□□□ 0.51
DFFB-209ENST00000477548 TARBP1Q13395 1621 aaKnown RBP18.23■□□□□ 0.51
DFFB-209ENST00000477548 RTN4Q9NQC3 1192 aaKnown RBP18.22■□□□□ 0.51
DFFB-209ENST00000477548 UACAQ9BZF9 1416 aa18.21■□□□□ 0.51
DFFB-209ENST00000477548 CNTLNQ9NXG0 1405 aa18.21■□□□□ 0.51
DFFB-209ENST00000477548 PRKRIP1Q9H875 184 aaPredicted RBP18.2■□□□□ 0.5
DFFB-209ENST00000477548 EIF4G2P78344 907 aaKnown RBP eCLIP18.2■□□□□ 0.5
DFFB-209ENST00000477548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.19■□□□□ 0.5
DFFB-209ENST00000477548 CTTNBP2Q8WZ74 1663 aa18.19■□□□□ 0.5
DFFB-209ENST00000477548 CFAP43Q8NDM7 1665 aa18.18■□□□□ 0.5
DFFB-209ENST00000477548 ZNF608Q9ULD9 1512 aaPredicted RBP18.17■□□□□ 0.5
DFFB-209ENST00000477548 ARID3CA6NKF2 412 aa18.16■□□□□ 0.5
DFFB-209ENST00000477548 NCOA2Q15596 1464 aa18.15■□□□□ 0.5
DFFB-209ENST00000477548 MRC2Q9UBG0 1479 aa18.15■□□□□ 0.5
DFFB-209ENST00000477548 AKNAQ7Z591 1439 aa18.14■□□□□ 0.49
DFFB-209ENST00000477548 HFM1A2PYH4 1435 aa18.13■□□□□ 0.49
DFFB-209ENST00000477548 KDM5BQ9UGL1 1544 aa18.13■□□□□ 0.49
DFFB-209ENST00000477548 CASKIN1Q8WXD9 1431 aa18.13■□□□□ 0.49
DFFB-209ENST00000477548 FGD6Q6ZV73 1430 aa18.12■□□□□ 0.49
DFFB-209ENST00000477548 EFCAB5A4FU69 1503 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 245.2 ms