RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 TDRD9Q8NDG6 1382 aaKnown RBP22.3■■□□□ 1.16
CLSTN1-205ENST00000477264 ABCA5Q8WWZ7 1642 aa22.29■■□□□ 1.16
CLSTN1-205ENST00000477264 IFT140Q96RY7 1462 aa22.28■■□□□ 1.16
CLSTN1-205ENST00000477264 GAPVD1Q14C86 1478 aa22.27■■□□□ 1.16
CLSTN1-205ENST00000477264 CARMIL1Q5VZK9 1371 aa22.26■■□□□ 1.15
CLSTN1-205ENST00000477264 SUPT16HQ9Y5B9 1047 aaKnown RBP22.26■■□□□ 1.15
CLSTN1-205ENST00000477264 ANP32EQ9BTT0 268 aa22.24■■□□□ 1.15
CLSTN1-205ENST00000477264 CUL7Q14999 1698 aa22.24■■□□□ 1.15
CLSTN1-205ENST00000477264 VPS8Q8N3P4 1428 aa22.18■■□□□ 1.14
CLSTN1-205ENST00000477264 PBRM1Q86U86 1689 aa22.17■■□□□ 1.14
CLSTN1-205ENST00000477264 AQRO60306 1485 aaKnown RBP eCLIP22.16■■□□□ 1.14
CLSTN1-205ENST00000477264 ZNF608Q9ULD9 1512 aaPredicted RBP22.13■■□□□ 1.13
CLSTN1-205ENST00000477264 TSHZ2Q9NRE2 1034 aa22.13■■□□□ 1.13
CLSTN1-205ENST00000477264 GRIN2BQ13224 1484 aa22.11■■□□□ 1.13
CLSTN1-205ENST00000477264 CLIP1P30622 1438 aa22.11■■□□□ 1.13
CLSTN1-205ENST00000477264 HNRNPUL2Q1KMD3 747 aaKnown RBP22.11■■□□□ 1.13
CLSTN1-205ENST00000477264 EIF4G3O43432 1585 aaKnown RBP22.09■■□□□ 1.13
CLSTN1-205ENST00000477264 RANGAP1P46060 587 aaPredicted RBP22.08■■□□□ 1.12
CLSTN1-205ENST00000477264 FHAD1B1AJZ9 1412 aa22.02■■□□□ 1.12
CLSTN1-205ENST00000477264 BCL11AQ9H165 835 aa22.02■■□□□ 1.12
CLSTN1-205ENST00000477264 ADAMTS12P58397 1594 aa22.01■■□□□ 1.11
CLSTN1-205ENST00000477264 DHX57Q6P158 1386 aaKnown RBP22■■□□□ 1.11
CLSTN1-205ENST00000477264 CTTNBP2Q8WZ74 1663 aa21.99■■□□□ 1.11
CLSTN1-205ENST00000477264 APLP2Q06481 763 aa21.98■■□□□ 1.11
CLSTN1-205ENST00000477264 SNAPC4Q5SXM2 1469 aa21.96■■□□□ 1.11
CLSTN1-205ENST00000477264 MAGI1Q96QZ7 1491 aaPredicted RBP21.93■■□□□ 1.1
CLSTN1-205ENST00000477264 ARHGAP35Q9NRY4 1499 aa21.88■■□□□ 1.09
CLSTN1-205ENST00000477264 ARAP1Q96P48 1450 aa21.85■■□□□ 1.09
CLSTN1-205ENST00000477264 SYNJ2O15056 1496 aa21.85■■□□□ 1.09
CLSTN1-205ENST00000477264 CHMP7Q8WUX9 453 aaPredicted RBP21.84■■□□□ 1.09
CLSTN1-205ENST00000477264 GRIN2AQ12879 1464 aa21.83■■□□□ 1.09
CLSTN1-205ENST00000477264 EFCAB5A4FU69 1503 aa21.81■■□□□ 1.08
CLSTN1-205ENST00000477264 RRBP1Q9P2E9 1410 aaKnown RBP21.81■■□□□ 1.08
CLSTN1-205ENST00000477264 FBLN2P98095 1184 aa21.8■■□□□ 1.08
CLSTN1-205ENST00000477264 IQGAP2Q13576 1575 aa21.78■■□□□ 1.08
CLSTN1-205ENST00000477264 P3H3Q8IVL6 736 aa21.74■■□□□ 1.07
CLSTN1-205ENST00000477264 KIAA0586Q9BVV6 1533 aa21.72■■□□□ 1.07
CLSTN1-205ENST00000477264 SAMD9Q5K651 1589 aa21.71■■□□□ 1.07
CLSTN1-205ENST00000477264 FHOD3Q2V2M9 1422 aa21.69■■□□□ 1.06
CLSTN1-205ENST00000477264 CEP170Q5SW79 1584 aa21.68■■□□□ 1.06
CLSTN1-205ENST00000477264 NEFLP07196 543 aa21.65■■□□□ 1.06
CLSTN1-205ENST00000477264 NUP160Q12769 1436 aa21.65■■□□□ 1.06
CLSTN1-205ENST00000477264 UGGT2Q9NYU1 1516 aa21.64■■□□□ 1.06
CLSTN1-205ENST00000477264 CHD1O14646 1710 aa21.64■■□□□ 1.06
CLSTN1-205ENST00000477264 FMN1Q68DA7 1419 aa21.63■■□□□ 1.05
CLSTN1-205ENST00000477264 FKBP8Q14318 412 aa21.61■■□□□ 1.05
CLSTN1-205ENST00000477264 RBM19Q9Y4C8 960 aaKnown RBP21.61■■□□□ 1.05
CLSTN1-205ENST00000477264 MAPKBP1O60336 1514 aa21.59■■□□□ 1.05
CLSTN1-205ENST00000477264 CCNB3Q8WWL7 1395 aa21.58■■□□□ 1.05
CLSTN1-205ENST00000477264 PCF11O94913 1555 aaKnown RBP21.58■■□□□ 1.04
CLSTN1-205ENST00000477264 FYCO1Q9BQS8 1478 aa21.56■■□□□ 1.04
CLSTN1-205ENST00000477264 ATP1B4Q9UN42 357 aaPredicted RBP21.55■■□□□ 1.04
CLSTN1-205ENST00000477264 CASKIN1Q8WXD9 1431 aa21.55■■□□□ 1.04
CLSTN1-205ENST00000477264 KIAA0556O60303 1618 aa21.54■■□□□ 1.04
CLSTN1-205ENST00000477264 BCANQ96GW7 911 aa21.53■■□□□ 1.04
CLSTN1-205ENST00000477264 CCER2I3L3R5 266 aa21.53■■□□□ 1.04
CLSTN1-205ENST00000477264 DISP1Q96F81 1524 aa21.53■■□□□ 1.04
CLSTN1-205ENST00000477264 JPH4Q96JJ6 628 aa21.53■■□□□ 1.04
CLSTN1-205ENST00000477264 MAP3K1Q13233 1512 aa21.51■■□□□ 1.03
CLSTN1-205ENST00000477264 MYT1LQ9UL68 1186 aa21.5■■□□□ 1.03
CLSTN1-205ENST00000477264 CARMIL2Q6F5E8 1435 aa21.5■■□□□ 1.03
CLSTN1-205ENST00000477264 TIAM1Q13009 1591 aa21.5■■□□□ 1.03
CLSTN1-205ENST00000477264 FANCIQ9NVI1 1328 aa21.48■■□□□ 1.03
CLSTN1-205ENST00000477264 KCNH8Q96L42 1107 aa21.47■■□□□ 1.03
CLSTN1-205ENST00000477264 KANK4Q5T7N3 995 aaPredicted RBP21.46■■□□□ 1.03
CLSTN1-205ENST00000477264 CFAP43Q8NDM7 1665 aa21.46■■□□□ 1.03
CLSTN1-205ENST00000477264 TIMELESSQ9UNS1 1208 aa21.46■■□□□ 1.03
CLSTN1-205ENST00000477264 RAB3GAP2Q9H2M9 1393 aa21.45■■□□□ 1.02
CLSTN1-205ENST00000477264 HECW1Q76N89 1606 aa21.41■■□□□ 1.02
CLSTN1-205ENST00000477264 PPP1R15AO75807 674 aaPredicted RBP21.4■■□□□ 1.02
CLSTN1-205ENST00000477264 LRRC9Q6ZRR7 1453 aa21.39■■□□□ 1.02
CLSTN1-205ENST00000477264 PRG4Q92954 1404 aaPredicted RBP21.39■■□□□ 1.01
CLSTN1-205ENST00000477264 SETD5Q9C0A6 1442 aa21.39■■□□□ 1.01
CLSTN1-205ENST00000477264 LRRIQ1Q96JM4 1722 aa21.37■■□□□ 1.01
CLSTN1-205ENST00000477264 SHROOM2Q13796 1616 aa21.37■■□□□ 1.01
CLSTN1-205ENST00000477264 CCDC18Q5T9S5 1454 aa21.36■■□□□ 1.01
CLSTN1-205ENST00000477264 CLASP1Q7Z460 1538 aa21.34■■□□□ 1.01
CLSTN1-205ENST00000477264 DDX10Q13206 875 aaKnown RBP21.34■■□□□ 1.01
CLSTN1-205ENST00000477264 RAPGEF6Q8TEU7 1601 aa21.34■■□□□ 1.01
CLSTN1-205ENST00000477264 ANP32CO43423 234 aa21.33■■□□□ 1.01
CLSTN1-205ENST00000477264 MSH5O43196 834 aa21.33■■□□□ 1
CLSTN1-205ENST00000477264 ERICH6Q7L0X2 663 aa21.32■■□□□ 1
CLSTN1-205ENST00000477264 EPRSP07814 1512 aaKnown RBP21.31■■□□□ 1
CLSTN1-205ENST00000477264 MTUS2Q5JR59 1369 aa21.3■■□□□ 1
CLSTN1-205ENST00000477264 ERICH6BQ5W0A0 696 aa21.3■■□□□ 1
CLSTN1-205ENST00000477264 CDK11AQ9UQ88 783 aaPredicted RBP21.27■■□□□ 1
CLSTN1-205ENST00000477264 PLB1Q6P1J6 1458 aa21.27■■□□□ 1
CLSTN1-205ENST00000477264 PTPRGP23470 1445 aa21.26■□□□□ 0.99
CLSTN1-205ENST00000477264 NUP153P49790 1475 aaKnown RBP21.25■□□□□ 0.99
CLSTN1-205ENST00000477264 CDK13Q14004 1512 aaKnown RBP21.25■□□□□ 0.99
CLSTN1-205ENST00000477264 EHBP1L1Q8N3D4 1523 aa21.24■□□□□ 0.99
CLSTN1-205ENST00000477264 ARID3CA6NKF2 412 aa21.24■□□□□ 0.99
CLSTN1-205ENST00000477264 OSCARQ8IYS5 282 aa21.23■□□□□ 0.99
CLSTN1-205ENST00000477264 ITGAEP38570 1179 aa21.21■□□□□ 0.99
CLSTN1-205ENST00000477264 ABCA8O94911 1581 aa21.21■□□□□ 0.99
CLSTN1-205ENST00000477264 ERCC6L2Q5T890 1561 aa21.2■□□□□ 0.98
CLSTN1-205ENST00000477264 SUPT6HQ7KZ85 1726 aaKnown RBP21.2■□□□□ 0.98
CLSTN1-205ENST00000477264 TRIM52Q96A61 297 aa21.2■□□□□ 0.98
CLSTN1-205ENST00000477264 PHLDB1Q86UU1 1377 aa21.18■□□□□ 0.98
CLSTN1-205ENST00000477264 MAGI3Q5TCQ9 1506 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms