RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 EHMT2Q96KQ7 1210 aa12.07□□□□□ -0.48
CNTNAP3B-205ENST00000476961 ERCC6Q03468 1493 aa12.06□□□□□ -0.48
CNTNAP3B-205ENST00000476961 RAD54L2Q9Y4B4 1467 aa12.06□□□□□ -0.48
CNTNAP3B-205ENST00000476961 KIF27Q86VH2 1401 aa12.05□□□□□ -0.48
CNTNAP3B-205ENST00000476961 CLSPNQ9HAW4 1339 aa12.04□□□□□ -0.48
CNTNAP3B-205ENST00000476961 CUX2O14529 1486 aa12.04□□□□□ -0.48
CNTNAP3B-205ENST00000476961 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.03□□□□□ -0.48
CNTNAP3B-205ENST00000476961 DEKP35659 375 aaKnown RBP12.02□□□□□ -0.49
CNTNAP3B-205ENST00000476961 WDR62O43379 1518 aa12.02□□□□□ -0.49
CNTNAP3B-205ENST00000476961 ABCA10Q8WWZ4 1543 aa12.02□□□□□ -0.49
CNTNAP3B-205ENST00000476961 SUPT16HQ9Y5B9 1047 aaKnown RBP12.01□□□□□ -0.49
CNTNAP3B-205ENST00000476961 AEBP2Q6ZN18 517 aaPredicted RBP12□□□□□ -0.49
CNTNAP3B-205ENST00000476961 THOC2Q8NI27 1593 aaKnown RBP12□□□□□ -0.49
CNTNAP3B-205ENST00000476961 KIF21BO75037 1637 aa11.98□□□□□ -0.49
CNTNAP3B-205ENST00000476961 FGD1P98174 961 aa11.98□□□□□ -0.49
CNTNAP3B-205ENST00000476961 IGF1RP08069 1367 aa11.98□□□□□ -0.49
CNTNAP3B-205ENST00000476961 WDR97A6NE52 1622 aa11.97□□□□□ -0.49
CNTNAP3B-205ENST00000476961 TARBP1Q13395 1621 aaKnown RBP11.97□□□□□ -0.49
CNTNAP3B-205ENST00000476961 GOLGA3Q08378 1498 aa11.97□□□□□ -0.49
CNTNAP3B-205ENST00000476961 PRXQ9BXM0 1461 aa11.97□□□□□ -0.49
CNTNAP3B-205ENST00000476961 RAPGEF2Q9Y4G8 1499 aa11.95□□□□□ -0.5
CNTNAP3B-205ENST00000476961 TDRD9Q8NDG6 1382 aaKnown RBP11.94□□□□□ -0.5
CNTNAP3B-205ENST00000476961 TNIKQ9UKE5 1360 aa11.93□□□□□ -0.5
CNTNAP3B-205ENST00000476961 ABCA5Q8WWZ7 1642 aa11.92□□□□□ -0.5
CNTNAP3B-205ENST00000476961 IFT140Q96RY7 1462 aa11.92□□□□□ -0.5
CNTNAP3B-205ENST00000476961 UBTFP17480 764 aaKnown RBP11.92□□□□□ -0.5
CNTNAP3B-205ENST00000476961 ERICH3Q5RHP9 1530 aa11.91□□□□□ -0.5
CNTNAP3B-205ENST00000476961 TIMELESSQ9UNS1 1208 aa11.91□□□□□ -0.5
CNTNAP3B-205ENST00000476961 MSH5O43196 834 aa11.9□□□□□ -0.5
CNTNAP3B-205ENST00000476961 GAPVD1Q14C86 1478 aa11.9□□□□□ -0.5
CNTNAP3B-205ENST00000476961 YTHDC1Q96MU7 727 aaKnown RBP11.9□□□□□ -0.5
CNTNAP3B-205ENST00000476961 BCL11BQ9C0K0 894 aaPredicted RBP11.9□□□□□ -0.5
CNTNAP3B-205ENST00000476961 CARMIL1Q5VZK9 1371 aa11.9□□□□□ -0.5
CNTNAP3B-205ENST00000476961 ZNF608Q9ULD9 1512 aaPredicted RBP11.88□□□□□ -0.51
CNTNAP3B-205ENST00000476961 AQRO60306 1485 aaKnown RBP eCLIP11.88□□□□□ -0.51
CNTNAP3B-205ENST00000476961 ZMYND15Q9H091 742 aa11.88□□□□□ -0.51
CNTNAP3B-205ENST00000476961 AAMPQ13685 434 aa11.87□□□□□ -0.51
CNTNAP3B-205ENST00000476961 RBM19Q9Y4C8 960 aaKnown RBP11.87□□□□□ -0.51
CNTNAP3B-205ENST00000476961 CEP162Q5TB80 1403 aa11.86□□□□□ -0.51
CNTNAP3B-205ENST00000476961 A0A0U1RQG5 324 aaPredicted RBP11.84□□□□□ -0.51
CNTNAP3B-205ENST00000476961 CUL7Q14999 1698 aa11.84□□□□□ -0.51
CNTNAP3B-205ENST00000476961 GRIN2BQ13224 1484 aa11.82□□□□□ -0.52
CNTNAP3B-205ENST00000476961 PBRM1Q86U86 1689 aa11.82□□□□□ -0.52
CNTNAP3B-205ENST00000476961 EIF4G3O43432 1585 aaKnown RBP11.81□□□□□ -0.52
CNTNAP3B-205ENST00000476961 GLIPR1L2Q4G1C9 344 aa11.81□□□□□ -0.52
CNTNAP3B-205ENST00000476961 IL27Q8NEV9 243 aa11.81□□□□□ -0.52
CNTNAP3B-205ENST00000476961 TAF7LQ5H9L4 462 aa11.8□□□□□ -0.52
CNTNAP3B-205ENST00000476961 PLPPR3Q6T4P5 718 aa11.8□□□□□ -0.52
CNTNAP3B-205ENST00000476961 RBM10P98175 930 aaKnown RBP11.79□□□□□ -0.52
CNTNAP3B-205ENST00000476961 CLIP1P30622 1438 aa11.79□□□□□ -0.52
CNTNAP3B-205ENST00000476961 RTN4Q9NQC3 1192 aaKnown RBP11.78□□□□□ -0.52
CNTNAP3B-205ENST00000476961 FHAD1B1AJZ9 1412 aa11.78□□□□□ -0.52
CNTNAP3B-205ENST00000476961 ADAMTS12P58397 1594 aa11.77□□□□□ -0.52
CNTNAP3B-205ENST00000476961 SNAPC4Q5SXM2 1469 aa11.76□□□□□ -0.53
CNTNAP3B-205ENST00000476961 FANCIQ9NVI1 1328 aa11.73□□□□□ -0.53
CNTNAP3B-205ENST00000476961 VSIG10Q8N0Z9 540 aa11.73□□□□□ -0.53
CNTNAP3B-205ENST00000476961 MAGI1Q96QZ7 1491 aaPredicted RBP11.72□□□□□ -0.53
CNTNAP3B-205ENST00000476961 RSPH6AQ9H0K4 717 aa11.71□□□□□ -0.54
CNTNAP3B-205ENST00000476961 ARHGAP35Q9NRY4 1499 aa11.7□□□□□ -0.54
CNTNAP3B-205ENST00000476961 ARAP1Q96P48 1450 aa11.69□□□□□ -0.54
CNTNAP3B-205ENST00000476961 CTTNBP2Q8WZ74 1663 aa11.69□□□□□ -0.54
CNTNAP3B-205ENST00000476961 SYNJ2O15056 1496 aa11.68□□□□□ -0.54
CNTNAP3B-205ENST00000476961 GRIN2AQ12879 1464 aa11.68□□□□□ -0.54
CNTNAP3B-205ENST00000476961 VPS8Q8N3P4 1428 aa11.67□□□□□ -0.54
CNTNAP3B-205ENST00000476961 CHMP7Q8WUX9 453 aaPredicted RBP11.66□□□□□ -0.54
CNTNAP3B-205ENST00000476961 FBLN2P98095 1184 aa11.64□□□□□ -0.55
CNTNAP3B-205ENST00000476961 HOMEZQ8IX15 550 aa11.63□□□□□ -0.55
CNTNAP3B-205ENST00000476961 MIER1Q8N108 512 aa11.63□□□□□ -0.55
CNTNAP3B-205ENST00000476961 EFCAB5A4FU69 1503 aa11.62□□□□□ -0.55
CNTNAP3B-205ENST00000476961 IQGAP2Q13576 1575 aa11.62□□□□□ -0.55
CNTNAP3B-205ENST00000476961 CEP170Q5SW79 1584 aa11.62□□□□□ -0.55
CNTNAP3B-205ENST00000476961 KIAA0586Q9BVV6 1533 aa11.61□□□□□ -0.55
CNTNAP3B-205ENST00000476961 P3H3Q8IVL6 736 aa11.61□□□□□ -0.55
CNTNAP3B-205ENST00000476961 TULP1O00294 542 aaPredicted RBP11.61□□□□□ -0.55
CNTNAP3B-205ENST00000476961 NUP160Q12769 1436 aa11.61□□□□□ -0.55
CNTNAP3B-205ENST00000476961 FHOD3Q2V2M9 1422 aa11.6□□□□□ -0.55
CNTNAP3B-205ENST00000476961 SAMD9Q5K651 1589 aa11.6□□□□□ -0.55
CNTNAP3B-205ENST00000476961 ZNF316A6NFI3 1004 aaPredicted RBP11.57□□□□□ -0.56
CNTNAP3B-205ENST00000476961 UGGT2Q9NYU1 1516 aa11.57□□□□□ -0.56
CNTNAP3B-205ENST00000476961 RSPH4AQ5TD94 716 aa11.56□□□□□ -0.56
CNTNAP3B-205ENST00000476961 CHMP4AQ9BY43 222 aa11.56□□□□□ -0.56
CNTNAP3B-205ENST00000476961 DHX37Q8IY37 1157 aaKnown RBP11.56□□□□□ -0.56
CNTNAP3B-205ENST00000476961 CHD1O14646 1710 aa11.55□□□□□ -0.56
CNTNAP3B-205ENST00000476961 BRD2P25440 801 aaKnown RBP11.55□□□□□ -0.56
CNTNAP3B-205ENST00000476961 PAXIP1Q6ZW49 1069 aaPredicted RBP11.55□□□□□ -0.56
CNTNAP3B-205ENST00000476961 DISP1Q96F81 1524 aa11.53□□□□□ -0.56
CNTNAP3B-205ENST00000476961 C11orf95C9JLR9 678 aaPredicted RBP11.52□□□□□ -0.57
CNTNAP3B-205ENST00000476961 PCF11O94913 1555 aaKnown RBP11.52□□□□□ -0.57
CNTNAP3B-205ENST00000476961 FMN1Q68DA7 1419 aa11.52□□□□□ -0.57
CNTNAP3B-205ENST00000476961 JPH4Q96JJ6 628 aa11.52□□□□□ -0.57
CNTNAP3B-205ENST00000476961 KIAA0556O60303 1618 aa11.51□□□□□ -0.57
CNTNAP3B-205ENST00000476961 CASKIN1Q8WXD9 1431 aa11.5□□□□□ -0.57
CNTNAP3B-205ENST00000476961 FYCO1Q9BQS8 1478 aa11.49□□□□□ -0.57
CNTNAP3B-205ENST00000476961 KANK4Q5T7N3 995 aaPredicted RBP11.48□□□□□ -0.57
CNTNAP3B-205ENST00000476961 SAMD1Q6SPF0 538 aaPredicted RBP11.47□□□□□ -0.57
CNTNAP3B-205ENST00000476961 ATP1B4Q9UN42 357 aaPredicted RBP11.46□□□□□ -0.57
CNTNAP3B-205ENST00000476961 MAP3K1Q13233 1512 aa11.46□□□□□ -0.57
CNTNAP3B-205ENST00000476961 NBR1Q14596 966 aa11.46□□□□□ -0.58
CNTNAP3B-205ENST00000476961 ZNF326Q5BKZ1 582 aaKnown RBP11.46□□□□□ -0.58
CNTNAP3B-205ENST00000476961 CCER1Q8TC90 406 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms