RNA–Protein interactions for RNA: ENST00000476112.1

DCLRE1A-203, Transcript of DNA cross-link repair 1A, humanhuman

TSL 3

Gene DCLRE1A, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1A-203ENST00000476112 PIP4P2Q8N4L2 257 aa14.6□□□□□ -0.07
DCLRE1A-203ENST00000476112 PRR29P0C7W0 189 aa14.58□□□□□ -0.08
DCLRE1A-203ENST00000476112 WIZO95785 1651 aa14.58□□□□□ -0.08
DCLRE1A-203ENST00000476112 FXR2P51116 673 aaKnown RBP eCLIP14.57□□□□□ -0.08
DCLRE1A-203ENST00000476112 CADPSQ9ULU8 1353 aa14.57□□□□□ -0.08
DCLRE1A-203ENST00000476112 FKBP8Q14318 412 aa14.55□□□□□ -0.08
DCLRE1A-203ENST00000476112 TRIM41Q8WV44 630 aa14.55□□□□□ -0.08
DCLRE1A-203ENST00000476112 STAG3Q9UJ98 1225 aa14.55□□□□□ -0.08
DCLRE1A-203ENST00000476112 MRC2Q9UBG0 1479 aa14.54□□□□□ -0.08
DCLRE1A-203ENST00000476112 WDR62O43379 1518 aa14.49□□□□□ -0.09
DCLRE1A-203ENST00000476112 PRKAR2AP13861 404 aaKnown RBP14.47□□□□□ -0.09
DCLRE1A-203ENST00000476112 CEP164Q9UPV0 1460 aa14.45□□□□□ -0.1
DCLRE1A-203ENST00000476112 FANCD2Q9BXW9 1451 aa14.44□□□□□ -0.1
DCLRE1A-203ENST00000476112 PROM2Q8N271 834 aa14.42□□□□□ -0.1
DCLRE1A-203ENST00000476112 CHADLQ6NUI6 762 aa14.38□□□□□ -0.11
DCLRE1A-203ENST00000476112 CFTRP13569 1480 aa14.37□□□□□ -0.11
DCLRE1A-203ENST00000476112 RSF1Q96T23 1441 aaPredicted RBP14.35□□□□□ -0.11
DCLRE1A-203ENST00000476112 URB2Q14146 1524 aaKnown RBP14.34□□□□□ -0.11
DCLRE1A-203ENST00000476112 TOP2AP11388 1531 aaKnown RBP14.32□□□□□ -0.12
DCLRE1A-203ENST00000476112 HAX1O00165 279 aa14.28□□□□□ -0.12
DCLRE1A-203ENST00000476112 PRDM2Q13029 1718 aa14.24□□□□□ -0.13
DCLRE1A-203ENST00000476112 CREBZFQ9NS37 354 aa14.23□□□□□ -0.13
DCLRE1A-203ENST00000476112 FARP1Q9Y4F1 1045 aaPredicted RBP14.21□□□□□ -0.13
DCLRE1A-203ENST00000476112 ZNF608Q9ULD9 1512 aaPredicted RBP14.2□□□□□ -0.14
DCLRE1A-203ENST00000476112 CCDC88BA6NC98 1476 aa14.18□□□□□ -0.14
DCLRE1A-203ENST00000476112 RIMBP3CA6NJZ7 1639 aa14.18□□□□□ -0.14
DCLRE1A-203ENST00000476112 RIMBP3BA6NNM3 1639 aa14.18□□□□□ -0.14
DCLRE1A-203ENST00000476112 RIMBP3Q9UFD9 1639 aa14.18□□□□□ -0.14
DCLRE1A-203ENST00000476112 PLEKHG5O94827 1062 aa14.17□□□□□ -0.14
DCLRE1A-203ENST00000476112 FBXO3Q9UK99 471 aa14.16□□□□□ -0.14
DCLRE1A-203ENST00000476112 IFT140Q96RY7 1462 aa14.14□□□□□ -0.15
DCLRE1A-203ENST00000476112 MIER1Q8N108 512 aa14.14□□□□□ -0.15
DCLRE1A-203ENST00000476112 TOPBP1Q92547 1522 aa14.14□□□□□ -0.15
DCLRE1A-203ENST00000476112 PLCD3Q8N3E9 789 aa14.11□□□□□ -0.15
DCLRE1A-203ENST00000476112 ARHGEF11O15085 1522 aa14.1□□□□□ -0.15
DCLRE1A-203ENST00000476112 EIF4G3O43432 1585 aaKnown RBP14.1□□□□□ -0.15
DCLRE1A-203ENST00000476112 C19orf67A6NJJ6 358 aa14.09□□□□□ -0.15
DCLRE1A-203ENST00000476112 NPM1P06748 294 aaKnown RBP eCLIP14.09□□□□□ -0.15
DCLRE1A-203ENST00000476112 DNMBPQ6XZF7 1577 aa14.06□□□□□ -0.16
DCLRE1A-203ENST00000476112 CHD1O14646 1710 aa14.06□□□□□ -0.16
DCLRE1A-203ENST00000476112 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.16
DCLRE1A-203ENST00000476112 SP7Q8TDD2 431 aaPredicted RBP14.05□□□□□ -0.16
DCLRE1A-203ENST00000476112 CD44P16070 742 aaKnown RBP14.04□□□□□ -0.16
DCLRE1A-203ENST00000476112 CYB5RLQ6IPT4 315 aa14.03□□□□□ -0.16
DCLRE1A-203ENST00000476112 TARBP1Q13395 1621 aaKnown RBP14.03□□□□□ -0.16
DCLRE1A-203ENST00000476112 ABCC8Q09428 1581 aa14.02□□□□□ -0.16
DCLRE1A-203ENST00000476112 EVX2Q03828 476 aa14.02□□□□□ -0.17
DCLRE1A-203ENST00000476112 MNX1P50219 401 aaPredicted RBP13.99□□□□□ -0.17
DCLRE1A-203ENST00000476112 POLA1P09884 1462 aaPredicted RBP13.99□□□□□ -0.17
DCLRE1A-203ENST00000476112 PAK3O75914 559 aaPredicted RBP13.97□□□□□ -0.17
DCLRE1A-203ENST00000476112 ZBTB47Q9UFB7 747 aaPredicted RBP13.97□□□□□ -0.17
DCLRE1A-203ENST00000476112 RAD54L2Q9Y4B4 1467 aa13.97□□□□□ -0.17
DCLRE1A-203ENST00000476112 ARAP1Q96P48 1450 aa13.96□□□□□ -0.17
DCLRE1A-203ENST00000476112 TDRD9Q8NDG6 1382 aaKnown RBP13.95□□□□□ -0.18
DCLRE1A-203ENST00000476112 ZRANB1Q9UGI0 708 aa13.93□□□□□ -0.18
DCLRE1A-203ENST00000476112 SOGA1O94964 1423 aa13.91□□□□□ -0.18
DCLRE1A-203ENST00000476112 VASPP50552 380 aaPredicted RBP13.91□□□□□ -0.18
DCLRE1A-203ENST00000476112 SNAPC4Q5SXM2 1469 aa13.88□□□□□ -0.19
DCLRE1A-203ENST00000476112 FGD5Q6ZNL6 1462 aa13.88□□□□□ -0.19
DCLRE1A-203ENST00000476112 CUX1P39880 1505 aa13.85□□□□□ -0.19
DCLRE1A-203ENST00000476112 KLHL34Q8N239 644 aa13.84□□□□□ -0.19
DCLRE1A-203ENST00000476112 CHMP7Q8WUX9 453 aaPredicted RBP13.84□□□□□ -0.19
DCLRE1A-203ENST00000476112 CLASP1Q7Z460 1538 aa13.84□□□□□ -0.19
DCLRE1A-203ENST00000476112 TSPYL2Q9H2G4 693 aaPredicted RBP13.82□□□□□ -0.2
DCLRE1A-203ENST00000476112 SYNJ1O43426 1573 aa13.8□□□□□ -0.2
DCLRE1A-203ENST00000476112 GABBR2O75899 941 aa13.8□□□□□ -0.2
DCLRE1A-203ENST00000476112 GRIN2BQ13224 1484 aa13.8□□□□□ -0.2
DCLRE1A-203ENST00000476112 MAGI1Q96QZ7 1491 aaPredicted RBP13.8□□□□□ -0.2
DCLRE1A-203ENST00000476112 ZNF579Q8NAF0 562 aaKnown RBP13.79□□□□□ -0.2
DCLRE1A-203ENST00000476112 WDR97A6NE52 1622 aa13.79□□□□□ -0.2
DCLRE1A-203ENST00000476112 PBRM1Q86U86 1689 aa13.78□□□□□ -0.2
DCLRE1A-203ENST00000476112 SYNJ2O15056 1496 aa13.77□□□□□ -0.21
DCLRE1A-203ENST00000476112 CLCN6P51797 869 aa13.77□□□□□ -0.21
DCLRE1A-203ENST00000476112 RASEFQ8IZ41 740 aa13.75□□□□□ -0.21
DCLRE1A-203ENST00000476112 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
DCLRE1A-203ENST00000476112 NUBP1P53384 320 aa13.72□□□□□ -0.21
DCLRE1A-203ENST00000476112 PHF12Q96QT6 1004 aa13.72□□□□□ -0.21
DCLRE1A-203ENST00000476112 FAM212AQ96EL1 285 aa13.71□□□□□ -0.21
DCLRE1A-203ENST00000476112 ABCA5Q8WWZ7 1642 aa13.69□□□□□ -0.22
DCLRE1A-203ENST00000476112 SUPT5HO00267 1087 aaKnown RBP13.68□□□□□ -0.22
DCLRE1A-203ENST00000476112 ABCA10Q8WWZ4 1543 aa13.68□□□□□ -0.22
DCLRE1A-203ENST00000476112 ERCC6L2Q5T890 1561 aa13.67□□□□□ -0.22
DCLRE1A-203ENST00000476112 DCAF8Q5TAQ9 597 aa13.66□□□□□ -0.22
DCLRE1A-203ENST00000476112 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
DCLRE1A-203ENST00000476112 CCDC61Q9Y6R9 512 aa13.66□□□□□ -0.22
DCLRE1A-203ENST00000476112 GRIN2AQ12879 1464 aa13.63□□□□□ -0.23
DCLRE1A-203ENST00000476112 SPOCK2Q92563 424 aa13.63□□□□□ -0.23
DCLRE1A-203ENST00000476112 CEP170Q5SW79 1584 aa13.62□□□□□ -0.23
DCLRE1A-203ENST00000476112 WRNQ14191 1432 aaPredicted RBP eCLIP13.61□□□□□ -0.23
DCLRE1A-203ENST00000476112 ADAMTS12P58397 1594 aa13.61□□□□□ -0.23
DCLRE1A-203ENST00000476112 GALR2O43603 387 aaPredicted RBP13.6□□□□□ -0.23
DCLRE1A-203ENST00000476112 DCBLD2Q96PD2 775 aa13.59□□□□□ -0.23
DCLRE1A-203ENST00000476112 NUP160Q12769 1436 aa13.57□□□□□ -0.24
DCLRE1A-203ENST00000476112 GSE1Q14687 1217 aa13.57□□□□□ -0.24
DCLRE1A-203ENST00000476112 TOP2BQ02880 1626 aa13.57□□□□□ -0.24
DCLRE1A-203ENST00000476112 BIVM-ERCC5R4GMW8 1640 aa13.57□□□□□ -0.24
DCLRE1A-203ENST00000476112 KIF12Q96FN5 646 aa13.56□□□□□ -0.24
DCLRE1A-203ENST00000476112 MS4A3Q96HJ5 214 aa13.56□□□□□ -0.24
DCLRE1A-203ENST00000476112 SHROOM2Q13796 1616 aa13.54□□□□□ -0.24
DCLRE1A-203ENST00000476112 FHAD1B1AJZ9 1412 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms