RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 NEFLP07196 543 aa19.46■□□□□ 0.71
SEMA4D-217ENST00000475255 BCL11AQ9H165 835 aa19.46■□□□□ 0.71
SEMA4D-217ENST00000475255 RBM19Q9Y4C8 960 aaKnown RBP19.45■□□□□ 0.7
SEMA4D-217ENST00000475255 CUX2O14529 1486 aa19.45■□□□□ 0.7
SEMA4D-217ENST00000475255 PPP1R15AO75807 674 aaPredicted RBP19.43■□□□□ 0.7
SEMA4D-217ENST00000475255 IRX6P78412 446 aaPredicted RBP19.43■□□□□ 0.7
SEMA4D-217ENST00000475255 BIVM-ERCC5R4GMW8 1640 aa19.43■□□□□ 0.7
SEMA4D-217ENST00000475255 PHLDB1Q86UU1 1377 aa19.43■□□□□ 0.7
SEMA4D-217ENST00000475255 SETD5Q9C0A6 1442 aa19.43■□□□□ 0.7
SEMA4D-217ENST00000475255 ANP32CO43423 234 aa19.38■□□□□ 0.69
SEMA4D-217ENST00000475255 IGF1RP08069 1367 aa19.3■□□□□ 0.68
SEMA4D-217ENST00000475255 TIAM1Q13009 1591 aa19.3■□□□□ 0.68
SEMA4D-217ENST00000475255 LRRC9Q6ZRR7 1453 aa19.29■□□□□ 0.68
SEMA4D-217ENST00000475255 MSH5O43196 834 aa19.28■□□□□ 0.68
SEMA4D-217ENST00000475255 HNRNPUQ00839 825 aaKnown RBP eCLIP19.26■□□□□ 0.67
SEMA4D-217ENST00000475255 CARMIL1Q5VZK9 1371 aa19.26■□□□□ 0.67
SEMA4D-217ENST00000475255 CCER2I3L3R5 266 aa19.23■□□□□ 0.67
SEMA4D-217ENST00000475255 TONSLQ96HA7 1378 aa19.22■□□□□ 0.67
SEMA4D-217ENST00000475255 FHOD3Q2V2M9 1422 aa19.21■□□□□ 0.67
SEMA4D-217ENST00000475255 ERICH6Q7L0X2 663 aa19.17■□□□□ 0.66
SEMA4D-217ENST00000475255 CFTRP13569 1480 aa19.16■□□□□ 0.66
SEMA4D-217ENST00000475255 PCF11O94913 1555 aaKnown RBP19.14■□□□□ 0.65
SEMA4D-217ENST00000475255 CCDC184Q52MB2 194 aa19.13■□□□□ 0.65
SEMA4D-217ENST00000475255 CNGB1Q14028 1251 aaPredicted RBP19.12■□□□□ 0.65
SEMA4D-217ENST00000475255 NCAPD3P42695 1498 aa19.12■□□□□ 0.65
SEMA4D-217ENST00000475255 TIMELESSQ9UNS1 1208 aa19.11■□□□□ 0.65
SEMA4D-217ENST00000475255 FGD5Q6ZNL6 1462 aa19.1■□□□□ 0.65
SEMA4D-217ENST00000475255 CHIC2Q9UKJ5 165 aa19.09■□□□□ 0.65
SEMA4D-217ENST00000475255 CDK11AQ9UQ88 783 aaPredicted RBP19.09■□□□□ 0.65
SEMA4D-217ENST00000475255 FHAD1B1AJZ9 1412 aa19.09■□□□□ 0.65
SEMA4D-217ENST00000475255 SENP3-EIF4A1A0A087X0R7 540 aa19.07■□□□□ 0.64
SEMA4D-217ENST00000475255 PTPRKQ15262 1439 aa19.07■□□□□ 0.64
SEMA4D-217ENST00000475255 RRP7BPQ9NSQ0 103 aa19.07■□□□□ 0.64
SEMA4D-217ENST00000475255 MAP3K1Q13233 1512 aa19.07■□□□□ 0.64
SEMA4D-217ENST00000475255 FAM9BQ8IZU0 186 aa19.06■□□□□ 0.64
SEMA4D-217ENST00000475255 CCDC18Q5T9S5 1454 aa19.05■□□□□ 0.64
SEMA4D-217ENST00000475255 HSPA5P11021 654 aaKnown RBP19.04■□□□□ 0.64
SEMA4D-217ENST00000475255 B4GALNT3Q6L9W6 998 aa19.04■□□□□ 0.64
SEMA4D-217ENST00000475255 WASHC2AQ641Q2 1341 aa19.04■□□□□ 0.64
SEMA4D-217ENST00000475255 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.64
SEMA4D-217ENST00000475255 HMGXB3Q12766 1538 aa19.03■□□□□ 0.64
SEMA4D-217ENST00000475255 FOXD1Q16676 465 aa19.02■□□□□ 0.63
SEMA4D-217ENST00000475255 MTUS2Q5JR59 1369 aa19.01■□□□□ 0.63
SEMA4D-217ENST00000475255 FGD6Q6ZV73 1430 aa19■□□□□ 0.63
SEMA4D-217ENST00000475255 RAD54L2Q9Y4B4 1467 aa19■□□□□ 0.63
SEMA4D-217ENST00000475255 ARID3CA6NKF2 412 aa19■□□□□ 0.63
SEMA4D-217ENST00000475255 CFAP43Q8NDM7 1665 aa18.98■□□□□ 0.63
SEMA4D-217ENST00000475255 C11orf95C9JLR9 678 aaPredicted RBP18.97■□□□□ 0.63
SEMA4D-217ENST00000475255 CADPSQ9ULU8 1353 aa18.95■□□□□ 0.62
SEMA4D-217ENST00000475255 UACAQ9BZF9 1416 aa18.94■□□□□ 0.62
SEMA4D-217ENST00000475255 FANCIQ9NVI1 1328 aa18.94■□□□□ 0.62
SEMA4D-217ENST00000475255 CASKIN1Q8WXD9 1431 aa18.92■□□□□ 0.62
SEMA4D-217ENST00000475255 MRS2Q9HD23 443 aa18.92■□□□□ 0.62
SEMA4D-217ENST00000475255 NAIPQ13075 1403 aa18.92■□□□□ 0.62
SEMA4D-217ENST00000475255 FYCO1Q9BQS8 1478 aa18.91■□□□□ 0.62
SEMA4D-217ENST00000475255 HFM1A2PYH4 1435 aa18.9■□□□□ 0.62
SEMA4D-217ENST00000475255 PPP4R2Q9NY27 417 aa18.9■□□□□ 0.62
SEMA4D-217ENST00000475255 EIF4G2P78344 907 aaKnown RBP eCLIP18.89■□□□□ 0.62
SEMA4D-217ENST00000475255 NBR1Q14596 966 aa18.89■□□□□ 0.61
SEMA4D-217ENST00000475255 POLR3GLQ9BT43 218 aa18.89■□□□□ 0.61
SEMA4D-217ENST00000475255 PTPN23Q9H3S7 1636 aa18.88■□□□□ 0.61
SEMA4D-217ENST00000475255 L3MBTL2Q969R5 705 aa18.88■□□□□ 0.61
SEMA4D-217ENST00000475255 KDM5BQ9UGL1 1544 aa18.87■□□□□ 0.61
SEMA4D-217ENST00000475255 PRKRIP1Q9H875 184 aaPredicted RBP18.85■□□□□ 0.61
SEMA4D-217ENST00000475255 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.84■□□□□ 0.61
SEMA4D-217ENST00000475255 NCOA2Q15596 1464 aa18.84■□□□□ 0.61
SEMA4D-217ENST00000475255 FMN1Q68DA7 1419 aa18.81■□□□□ 0.6
SEMA4D-217ENST00000475255 FANCD2Q9BXW9 1451 aa18.81■□□□□ 0.6
SEMA4D-217ENST00000475255 MYOM3Q5VTT5 1437 aa18.8■□□□□ 0.6
SEMA4D-217ENST00000475255 TDRD9Q8NDG6 1382 aaKnown RBP18.8■□□□□ 0.6
SEMA4D-217ENST00000475255 PAK3O75914 559 aaPredicted RBP18.8■□□□□ 0.6
SEMA4D-217ENST00000475255 NBPF8Q3BBV2 869 aa18.8■□□□□ 0.6
SEMA4D-217ENST00000475255 MPHOSPH9Q99550 1183 aa18.8■□□□□ 0.6
SEMA4D-217ENST00000475255 SNAPC4Q5SXM2 1469 aa18.79■□□□□ 0.6
SEMA4D-217ENST00000475255 DEKP35659 375 aaKnown RBP18.79■□□□□ 0.6
SEMA4D-217ENST00000475255 CNTLNQ9NXG0 1405 aa18.78■□□□□ 0.6
SEMA4D-217ENST00000475255 DENND4BO75064 1496 aaPredicted RBP18.77■□□□□ 0.59
SEMA4D-217ENST00000475255 POLA1P09884 1462 aaPredicted RBP18.77■□□□□ 0.59
SEMA4D-217ENST00000475255 SLC24A1O60721 1099 aa18.77■□□□□ 0.59
SEMA4D-217ENST00000475255 PRKCSHP14314 528 aaPredicted RBP18.76■□□□□ 0.59
SEMA4D-217ENST00000475255 ZNF326Q5BKZ1 582 aaKnown RBP18.76■□□□□ 0.59
SEMA4D-217ENST00000475255 CCDC7Q96M83 1385 aa18.76■□□□□ 0.59
SEMA4D-217ENST00000475255 EFCAB5A4FU69 1503 aa18.75■□□□□ 0.59
SEMA4D-217ENST00000475255 KDM6BO15054 1643 aa18.75■□□□□ 0.59
SEMA4D-217ENST00000475255 NESP48681 1621 aa18.75■□□□□ 0.59
SEMA4D-217ENST00000475255 AKNAQ7Z591 1439 aa18.74■□□□□ 0.59
SEMA4D-217ENST00000475255 PRDM2Q13029 1718 aa18.73■□□□□ 0.59
SEMA4D-217ENST00000475255 KIF7Q2M1P5 1343 aa18.72■□□□□ 0.59
SEMA4D-217ENST00000475255 ZBED9Q6R2W3 1325 aa18.72■□□□□ 0.59
SEMA4D-217ENST00000475255 LRRIQ1Q96JM4 1722 aa18.72■□□□□ 0.59
SEMA4D-217ENST00000475255 NOP58Q9Y2X3 529 aaKnown RBP18.7■□□□□ 0.58
SEMA4D-217ENST00000475255 ABCA10Q8WWZ4 1543 aa18.7■□□□□ 0.58
SEMA4D-217ENST00000475255 TOPBP1Q92547 1522 aa18.7■□□□□ 0.58
SEMA4D-217ENST00000475255 MAGI3Q5TCQ9 1506 aa18.69■□□□□ 0.58
SEMA4D-217ENST00000475255 ERICH6BQ5W0A0 696 aa18.68■□□□□ 0.58
SEMA4D-217ENST00000475255 NCOA1Q15788 1441 aa18.67■□□□□ 0.58
SEMA4D-217ENST00000475255 CCDC136Q96JN2 1154 aa18.67■□□□□ 0.58
SEMA4D-217ENST00000475255 CTTNBP2Q8WZ74 1663 aa18.66■□□□□ 0.58
SEMA4D-217ENST00000475255 ZNF644Q9H582 1327 aaPredicted RBP18.65■□□□□ 0.58
SEMA4D-217ENST00000475255 GRIN2BQ13224 1484 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms