RNA–Protein interactions for RNA: ENST00000474941.1

SS18L2-203, Transcript of SS18 like 2, humanhuman

TSL 2

Gene SS18L2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L2-203ENST00000474941 WIZO95785 1651 aa14.05□□□□□ -0.16
SS18L2-203ENST00000474941 REM2Q8IYK8 340 aaPredicted RBP14.05□□□□□ -0.16
SS18L2-203ENST00000474941 CLEC11AQ9Y240 323 aa14.01□□□□□ -0.17
SS18L2-203ENST00000474941 PRR29P0C7W0 189 aa13.99□□□□□ -0.17
SS18L2-203ENST00000474941 SPOCK2Q92563 424 aa13.99□□□□□ -0.17
SS18L2-203ENST00000474941 LAMC3Q9Y6N6 1575 aa13.96□□□□□ -0.18
SS18L2-203ENST00000474941 NESP48681 1621 aa13.95□□□□□ -0.18
SS18L2-203ENST00000474941 ERCC6Q03468 1493 aa13.94□□□□□ -0.18
SS18L2-203ENST00000474941 RSF1Q96T23 1441 aaPredicted RBP13.94□□□□□ -0.18
SS18L2-203ENST00000474941 KIF21AQ7Z4S6 1674 aa13.88□□□□□ -0.19
SS18L2-203ENST00000474941 TOP2AP11388 1531 aaKnown RBP13.88□□□□□ -0.19
SS18L2-203ENST00000474941 CUX2O14529 1486 aa13.87□□□□□ -0.19
SS18L2-203ENST00000474941 PITPNM1O00562 1244 aa13.85□□□□□ -0.19
SS18L2-203ENST00000474941 THOC2Q8NI27 1593 aaKnown RBP13.83□□□□□ -0.19
SS18L2-203ENST00000474941 CADPSQ9ULU8 1353 aa13.81□□□□□ -0.2
SS18L2-203ENST00000474941 PDS5BQ9NTI5 1447 aa13.8□□□□□ -0.2
SS18L2-203ENST00000474941 PRDM2Q13029 1718 aa13.78□□□□□ -0.2
SS18L2-203ENST00000474941 NPM1P06748 294 aaKnown RBP eCLIP13.74□□□□□ -0.21
SS18L2-203ENST00000474941 CREBZFQ9NS37 354 aa13.74□□□□□ -0.21
SS18L2-203ENST00000474941 CFTRP13569 1480 aa13.73□□□□□ -0.21
SS18L2-203ENST00000474941 TRIM41Q8WV44 630 aa13.72□□□□□ -0.21
SS18L2-203ENST00000474941 GSE1Q14687 1217 aa13.71□□□□□ -0.21
SS18L2-203ENST00000474941 CIZ1Q9ULV3 898 aaPredicted RBP13.7□□□□□ -0.22
SS18L2-203ENST00000474941 MRC2Q9UBG0 1479 aa13.69□□□□□ -0.22
SS18L2-203ENST00000474941 PKD2Q13563 968 aa13.69□□□□□ -0.22
SS18L2-203ENST00000474941 CEP164Q9UPV0 1460 aa13.68□□□□□ -0.22
SS18L2-203ENST00000474941 WDR62O43379 1518 aa13.68□□□□□ -0.22
SS18L2-203ENST00000474941 CCDC88BA6NC98 1476 aa13.67□□□□□ -0.22
SS18L2-203ENST00000474941 FANCD2Q9BXW9 1451 aa13.67□□□□□ -0.22
SS18L2-203ENST00000474941 ECM2O94769 699 aaPredicted RBP13.67□□□□□ -0.22
SS18L2-203ENST00000474941 FAM212AQ96EL1 285 aa13.64□□□□□ -0.23
SS18L2-203ENST00000474941 CHRDL2Q6WN34 429 aa13.61□□□□□ -0.23
SS18L2-203ENST00000474941 DCAF8Q5TAQ9 597 aa13.6□□□□□ -0.23
SS18L2-203ENST00000474941 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
SS18L2-203ENST00000474941 NUBP1P53384 320 aa13.59□□□□□ -0.23
SS18L2-203ENST00000474941 URB2Q14146 1524 aaKnown RBP13.56□□□□□ -0.24
SS18L2-203ENST00000474941 FXR2P51116 673 aaKnown RBP eCLIP13.56□□□□□ -0.24
SS18L2-203ENST00000474941 PRKAR2AP13861 404 aaKnown RBP13.55□□□□□ -0.24
SS18L2-203ENST00000474941 DNAJC5Q9H3Z4 198 aa13.53□□□□□ -0.24
SS18L2-203ENST00000474941 TAOK2Q9UL54 1235 aa13.53□□□□□ -0.24
SS18L2-203ENST00000474941 FARP1Q9Y4F1 1045 aaPredicted RBP13.53□□□□□ -0.24
SS18L2-203ENST00000474941 CHADLQ6NUI6 762 aa13.52□□□□□ -0.25
SS18L2-203ENST00000474941 ABCC8Q09428 1581 aa13.46□□□□□ -0.25
SS18L2-203ENST00000474941 DNMBPQ6XZF7 1577 aa13.46□□□□□ -0.25
SS18L2-203ENST00000474941 TOPBP1Q92547 1522 aa13.46□□□□□ -0.25
SS18L2-203ENST00000474941 PAK3O75914 559 aaPredicted RBP13.45□□□□□ -0.26
SS18L2-203ENST00000474941 PIP4P2Q8N4L2 257 aa13.45□□□□□ -0.26
SS18L2-203ENST00000474941 RASEFQ8IZ41 740 aa13.44□□□□□ -0.26
SS18L2-203ENST00000474941 SUPT5HO00267 1087 aaKnown RBP13.43□□□□□ -0.26
SS18L2-203ENST00000474941 CHRM1P11229 460 aaPredicted RBP13.43□□□□□ -0.26
SS18L2-203ENST00000474941 RGL2O15211 777 aa13.41□□□□□ -0.26
SS18L2-203ENST00000474941 SLC24A1O60721 1099 aa13.41□□□□□ -0.26
SS18L2-203ENST00000474941 IFT140Q96RY7 1462 aa13.4□□□□□ -0.26
SS18L2-203ENST00000474941 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.37□□□□□ -0.27
SS18L2-203ENST00000474941 TARBP1Q13395 1621 aaKnown RBP13.36□□□□□ -0.27
SS18L2-203ENST00000474941 RIOK3O14730 519 aaKnown RBP13.35□□□□□ -0.27
SS18L2-203ENST00000474941 TSPYL2Q9H2G4 693 aaPredicted RBP13.35□□□□□ -0.27
SS18L2-203ENST00000474941 EIF4G3O43432 1585 aaKnown RBP13.34□□□□□ -0.27
SS18L2-203ENST00000474941 ZNF608Q9ULD9 1512 aaPredicted RBP13.34□□□□□ -0.27
SS18L2-203ENST00000474941 BBXQ8WY36 941 aaPredicted RBP13.33□□□□□ -0.28
SS18L2-203ENST00000474941 POLA1P09884 1462 aaPredicted RBP13.33□□□□□ -0.28
SS18L2-203ENST00000474941 CUX1P39880 1505 aa13.31□□□□□ -0.28
SS18L2-203ENST00000474941 PYGBP11216 843 aa13.29□□□□□ -0.28
SS18L2-203ENST00000474941 VGFO15240 615 aaPredicted RBP13.28□□□□□ -0.28
SS18L2-203ENST00000474941 CHGAP10645 457 aaKnown RBP13.28□□□□□ -0.28
SS18L2-203ENST00000474941 FGD5Q6ZNL6 1462 aa13.28□□□□□ -0.28
SS18L2-203ENST00000474941 ZNF467Q7Z7K2 595 aaPredicted RBP13.27□□□□□ -0.29
SS18L2-203ENST00000474941 WDR97A6NE52 1622 aa13.27□□□□□ -0.29
SS18L2-203ENST00000474941 PLCB2Q00722 1185 aa13.26□□□□□ -0.29
SS18L2-203ENST00000474941 CHD1O14646 1710 aa13.25□□□□□ -0.29
SS18L2-203ENST00000474941 RAD54L2Q9Y4B4 1467 aa13.24□□□□□ -0.29
SS18L2-203ENST00000474941 SOGA1O94964 1423 aa13.24□□□□□ -0.29
SS18L2-203ENST00000474941 HS6ST3Q8IZP7 471 aa13.23□□□□□ -0.29
SS18L2-203ENST00000474941 BIVM-ERCC5R4GMW8 1640 aa13.23□□□□□ -0.29
SS18L2-203ENST00000474941 AQRO60306 1485 aaKnown RBP eCLIP13.23□□□□□ -0.29
SS18L2-203ENST00000474941 RNF25Q96BH1 459 aaPredicted RBP13.21□□□□□ -0.29
SS18L2-203ENST00000474941 SGIP1Q9BQI5 828 aa13.21□□□□□ -0.29
SS18L2-203ENST00000474941 CCDC61Q9Y6R9 512 aa13.21□□□□□ -0.29
SS18L2-203ENST00000474941 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
SS18L2-203ENST00000474941 PBRM1Q86U86 1689 aa13.2□□□□□ -0.3
SS18L2-203ENST00000474941 TOP2BQ02880 1626 aa13.2□□□□□ -0.3
SS18L2-203ENST00000474941 ZRANB1Q9UGI0 708 aa13.18□□□□□ -0.3
SS18L2-203ENST00000474941 SYNJ1O43426 1573 aa13.17□□□□□ -0.3
SS18L2-203ENST00000474941 TDRD9Q8NDG6 1382 aaKnown RBP13.17□□□□□ -0.3
SS18L2-203ENST00000474941 STK25O00506 426 aa13.16□□□□□ -0.3
SS18L2-203ENST00000474941 ZNF579Q8NAF0 562 aaKnown RBP13.16□□□□□ -0.3
SS18L2-203ENST00000474941 ABCA5Q8WWZ7 1642 aa13.16□□□□□ -0.3
SS18L2-203ENST00000474941 WRNQ14191 1432 aaPredicted RBP eCLIP13.15□□□□□ -0.3
SS18L2-203ENST00000474941 ABCA10Q8WWZ4 1543 aa13.15□□□□□ -0.3
SS18L2-203ENST00000474941 SPRYD3Q8NCJ5 442 aa13.15□□□□□ -0.3
SS18L2-203ENST00000474941 GRIN2BQ13224 1484 aa13.13□□□□□ -0.31
SS18L2-203ENST00000474941 SNAPC4Q5SXM2 1469 aa13.13□□□□□ -0.31
SS18L2-203ENST00000474941 MAGI1Q96QZ7 1491 aaPredicted RBP13.13□□□□□ -0.31
SS18L2-203ENST00000474941 PDAP1Q13442 181 aaKnown RBP13.13□□□□□ -0.31
SS18L2-203ENST00000474941 RYDENQ9NUL5 291 aaKnown RBP13.12□□□□□ -0.31
SS18L2-203ENST00000474941 PCDHB13Q9Y5F0 798 aa13.12□□□□□ -0.31
SS18L2-203ENST00000474941 GAPVD1Q14C86 1478 aa13.11□□□□□ -0.31
SS18L2-203ENST00000474941 RIMBP3CA6NJZ7 1639 aa13.1□□□□□ -0.31
SS18L2-203ENST00000474941 RIMBP3BA6NNM3 1639 aa13.1□□□□□ -0.31
SS18L2-203ENST00000474941 RIMBP3Q9UFD9 1639 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms