RNA–Protein interactions for RNA: ENST00000474941.1

SS18L2-203, Transcript of SS18 like 2, humanhuman

TSL 2

Gene SS18L2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L2-203ENST00000474941 AEBP2Q6ZN18 517 aaPredicted RBP25.18■■□□□ 1.62
SS18L2-203ENST00000474941 CHIC1Q5VXU3 224 aa25.05■■□□□ 1.6
SS18L2-203ENST00000474941 PHF23Q9BUL5 403 aaPredicted RBP21.92■■□□□ 1.1
SS18L2-203ENST00000474941 SENP3Q9H4L4 574 aaPredicted RBP21.58■■□□□ 1.05
SS18L2-203ENST00000474941 PLPPR3Q6T4P5 718 aa20.59■□□□□ 0.89
SS18L2-203ENST00000474941 FOXD1Q16676 465 aa19.82■□□□□ 0.76
SS18L2-203ENST00000474941 ADRA2BP18089 450 aa19.28■□□□□ 0.68
SS18L2-203ENST00000474941 PPP6R1Q9UPN7 881 aa19.23■□□□□ 0.67
SS18L2-203ENST00000474941 PIAS4Q8N2W9 510 aaPredicted RBP18.86■□□□□ 0.61
SS18L2-203ENST00000474941 NISCHQ9Y2I1 1504 aa18.4■□□□□ 0.54
SS18L2-203ENST00000474941 MSH5O43196 834 aa18.38■□□□□ 0.53
SS18L2-203ENST00000474941 PPP4R3CPQ6ZMV5 832 aa18.09■□□□□ 0.49
SS18L2-203ENST00000474941 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.46
SS18L2-203ENST00000474941 KCNA4P22459 653 aa17.92■□□□□ 0.46
SS18L2-203ENST00000474941 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
SS18L2-203ENST00000474941 CNKSR2Q8WXI2 1034 aa17.6■□□□□ 0.41
SS18L2-203ENST00000474941 NPM3O75607 178 aaKnown RBP17.4■□□□□ 0.38
SS18L2-203ENST00000474941 MAPK8IP2Q13387 824 aaPredicted RBP17.36■□□□□ 0.37
SS18L2-203ENST00000474941 SLC4A1APQ9BWU0 796 aaKnown RBP17.24■□□□□ 0.35
SS18L2-203ENST00000474941 DMRT2Q9Y5R5 561 aa17.21■□□□□ 0.35
SS18L2-203ENST00000474941 RNF216Q9NWF9 866 aaPredicted RBP17.17■□□□□ 0.34
SS18L2-203ENST00000474941 EHMT2Q96KQ7 1210 aa17.01■□□□□ 0.31
SS18L2-203ENST00000474941 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
SS18L2-203ENST00000474941 HOXD11P31277 338 aaPredicted RBP16.97■□□□□ 0.31
SS18L2-203ENST00000474941 CSRNP3Q8WYN3 585 aa16.64■□□□□ 0.25
SS18L2-203ENST00000474941 FOXD4L1Q9NU39 408 aa16.54■□□□□ 0.24
SS18L2-203ENST00000474941 CCDC180Q9P1Z9 1646 aa16.52■□□□□ 0.24
SS18L2-203ENST00000474941 DCAF8L1A6NGE4 600 aa16.49■□□□□ 0.23
SS18L2-203ENST00000474941 ZBTB22O15209 634 aa16.4■□□□□ 0.22
SS18L2-203ENST00000474941 SLC4A2P04920 1241 aa16.29■□□□□ 0.2
SS18L2-203ENST00000474941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.19
SS18L2-203ENST00000474941 MYCNP04198 464 aaPredicted RBP16.19■□□□□ 0.18
SS18L2-203ENST00000474941 ABCC9O60706 1549 aa16.16■□□□□ 0.18
SS18L2-203ENST00000474941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.08■□□□□ 0.16
SS18L2-203ENST00000474941 HNRNPUL2Q1KMD3 747 aaKnown RBP16.08■□□□□ 0.16
SS18L2-203ENST00000474941 ATXN8OSP0DMR3 200 aa16.03■□□□□ 0.16
SS18L2-203ENST00000474941 POTEDQ86YR6 584 aa16.02■□□□□ 0.16
SS18L2-203ENST00000474941 SAMD1Q6SPF0 538 aaPredicted RBP15.96■□□□□ 0.15
SS18L2-203ENST00000474941 APLP2Q06481 763 aa15.9■□□□□ 0.14
SS18L2-203ENST00000474941 U3KPZ7 1027 aaPredicted RBP15.88■□□□□ 0.13
SS18L2-203ENST00000474941 RNF39Q9H2S5 420 aa15.65■□□□□ 0.1
SS18L2-203ENST00000474941 C1QBPQ07021 282 aaKnown RBP15.6■□□□□ 0.09
SS18L2-203ENST00000474941 RB1CC1Q8TDY2 1594 aa15.55■□□□□ 0.08
SS18L2-203ENST00000474941 ATF5Q9Y2D1 282 aaPredicted RBP15.5■□□□□ 0.07
SS18L2-203ENST00000474941 NACADO15069 1562 aa15.49■□□□□ 0.07
SS18L2-203ENST00000474941 ZNF219Q9P2Y4 722 aaPredicted RBP15.47■□□□□ 0.07
SS18L2-203ENST00000474941 CAPN15O75808 1086 aa15.38■□□□□ 0.05
SS18L2-203ENST00000474941 MYO15BQ96JP2 1530 aa15.36■□□□□ 0.05
SS18L2-203ENST00000474941 TRHP20396 242 aaPredicted RBP15.35■□□□□ 0.05
SS18L2-203ENST00000474941 DCAF8L2P0C7V8 631 aa15.32■□□□□ 0.04
SS18L2-203ENST00000474941 ZCCHC6Q5VYS8 1495 aaKnown RBP15.31■□□□□ 0.04
SS18L2-203ENST00000474941 UNC13AQ9UPW8 1703 aa15.31■□□□□ 0.04
SS18L2-203ENST00000474941 SPINK5Q9NQ38 1064 aaPredicted RBP15.3■□□□□ 0.04
SS18L2-203ENST00000474941 DCAF1Q9Y4B6 1507 aa15.24■□□□□ 0.03
SS18L2-203ENST00000474941 POLA2Q14181 598 aa15.17■□□□□ 0.02
SS18L2-203ENST00000474941 FBLN2P98095 1184 aa15.15■□□□□ 0.02
SS18L2-203ENST00000474941 ZBTB12Q9Y330 459 aaPredicted RBP15.14■□□□□ 0.01
SS18L2-203ENST00000474941 FKBP8Q14318 412 aa15.1■□□□□ 0.01
SS18L2-203ENST00000474941 CACNB1Q02641 598 aaPredicted RBP15.09■□□□□ 0.01
SS18L2-203ENST00000474941 BICRAQ9NZM4 1560 aa15.08■□□□□ 0
SS18L2-203ENST00000474941 PABPN1Q86U42 306 aaKnown RBP eCLIP15.02■□□□□ -0
SS18L2-203ENST00000474941 ABCB7O75027 752 aa15.01□□□□□ -0.01
SS18L2-203ENST00000474941 SCRIBQ14160 1630 aa14.99□□□□□ -0.01
SS18L2-203ENST00000474941 DSG3P32926 999 aa14.97□□□□□ -0.01
SS18L2-203ENST00000474941 SHROOM4Q9ULL8 1493 aa14.92□□□□□ -0.02
SS18L2-203ENST00000474941 MKRN4PQ13434 485 aaPredicted RBP14.88□□□□□ -0.03
SS18L2-203ENST00000474941 SPDYE4A6NLX3 237 aa14.86□□□□□ -0.03
SS18L2-203ENST00000474941 FBXO3Q9UK99 471 aa14.69□□□□□ -0.06
SS18L2-203ENST00000474941 EIF4G1Q04637 1599 aaKnown RBP14.68□□□□□ -0.06
SS18L2-203ENST00000474941 CC2D2AQ9P2K1 1620 aa14.66□□□□□ -0.06
SS18L2-203ENST00000474941 SPDYE2BA6NHP3 402 aa14.65□□□□□ -0.06
SS18L2-203ENST00000474941 SPDYE6P0CI01 402 aa14.65□□□□□ -0.06
SS18L2-203ENST00000474941 SPDYE2Q495Y8 402 aa14.65□□□□□ -0.06
SS18L2-203ENST00000474941 ZNF692Q9BU19 519 aaPredicted RBP14.62□□□□□ -0.07
SS18L2-203ENST00000474941 PROM2Q8N271 834 aa14.58□□□□□ -0.08
SS18L2-203ENST00000474941 OSCARQ8IYS5 282 aa14.57□□□□□ -0.08
SS18L2-203ENST00000474941 CECR2Q9BXF3 1484 aa14.54□□□□□ -0.08
SS18L2-203ENST00000474941 SSUH2Q9Y2M2 353 aa14.47□□□□□ -0.09
SS18L2-203ENST00000474941 RBM42Q9BTD8 480 aaKnown RBP14.46□□□□□ -0.09
SS18L2-203ENST00000474941 AMER1Q5JTC6 1135 aaPredicted RBP14.41□□□□□ -0.1
SS18L2-203ENST00000474941 STAG3Q9UJ98 1225 aa14.38□□□□□ -0.11
SS18L2-203ENST00000474941 SMARCA4P51532 1647 aa14.35□□□□□ -0.11
SS18L2-203ENST00000474941 VASPP50552 380 aaPredicted RBP14.31□□□□□ -0.12
SS18L2-203ENST00000474941 BAZ1AQ9NRL2 1556 aaPredicted RBP14.3□□□□□ -0.12
SS18L2-203ENST00000474941 AKT1S1Q96B36 256 aa14.27□□□□□ -0.13
SS18L2-203ENST00000474941 SMARCA2P51531 1590 aa14.26□□□□□ -0.13
SS18L2-203ENST00000474941 NCAPD3P42695 1498 aa14.25□□□□□ -0.13
SS18L2-203ENST00000474941 ATAD2BQ9ULI0 1458 aa14.24□□□□□ -0.13
SS18L2-203ENST00000474941 HMGXB3Q12766 1538 aa14.22□□□□□ -0.13
SS18L2-203ENST00000474941 PEG3Q9GZU2 1588 aa14.21□□□□□ -0.14
SS18L2-203ENST00000474941 PLEKHG5O94827 1062 aa14.2□□□□□ -0.14
SS18L2-203ENST00000474941 MROH2BQ7Z745 1585 aa14.17□□□□□ -0.14
SS18L2-203ENST00000474941 RTN4Q9NQC3 1192 aaKnown RBP14.17□□□□□ -0.14
SS18L2-203ENST00000474941 SPDYE1Q8NFV5 336 aaPredicted RBP14.16□□□□□ -0.14
SS18L2-203ENST00000474941 PLCD3Q8N3E9 789 aa14.14□□□□□ -0.15
SS18L2-203ENST00000474941 BAZ1BQ9UIG0 1483 aaKnown RBP14.13□□□□□ -0.15
SS18L2-203ENST00000474941 MIER1Q8N108 512 aa14.11□□□□□ -0.15
SS18L2-203ENST00000474941 KLHL34Q8N239 644 aa14.1□□□□□ -0.15
SS18L2-203ENST00000474941 ZBTB47Q9UFB7 747 aaPredicted RBP14.1□□□□□ -0.15
SS18L2-203ENST00000474941 IFNLR1Q8IU57 520 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms