RNA–Protein interactions for RNA: ENST00000474792.1

NLRP3-207, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 2

Gene NLRP3, Length 2,524 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-207ENST00000474792 CLSPNQ9HAW4 1339 aa17.71■□□□□ 0.43
NLRP3-207ENST00000474792 ATP1B4Q9UN42 357 aaPredicted RBP17.71■□□□□ 0.43
NLRP3-207ENST00000474792 POLA1P09884 1462 aaPredicted RBP17.69■□□□□ 0.42
NLRP3-207ENST00000474792 TOPBP1Q92547 1522 aa17.69■□□□□ 0.42
NLRP3-207ENST00000474792 PCF11O94913 1555 aaKnown RBP17.65■□□□□ 0.42
NLRP3-207ENST00000474792 LRRC9Q6ZRR7 1453 aa17.65■□□□□ 0.42
NLRP3-207ENST00000474792 ABCA10Q8WWZ4 1543 aa17.65■□□□□ 0.42
NLRP3-207ENST00000474792 FHOD3Q2V2M9 1422 aa17.64■□□□□ 0.41
NLRP3-207ENST00000474792 FHAD1B1AJZ9 1412 aa17.63■□□□□ 0.41
NLRP3-207ENST00000474792 MAP3K1Q13233 1512 aa17.63■□□□□ 0.41
NLRP3-207ENST00000474792 PHLDB1Q86UU1 1377 aa17.62■□□□□ 0.41
NLRP3-207ENST00000474792 RAB3GAP2Q9H2M9 1393 aa17.61■□□□□ 0.41
NLRP3-207ENST00000474792 FAM50AQ14320 339 aaKnown RBP17.61■□□□□ 0.41
NLRP3-207ENST00000474792 CFAP43Q8NDM7 1665 aa17.6■□□□□ 0.41
NLRP3-207ENST00000474792 CUL7Q14999 1698 aa17.57■□□□□ 0.4
NLRP3-207ENST00000474792 CTTNBP2Q8WZ74 1663 aa17.57■□□□□ 0.4
NLRP3-207ENST00000474792 URB2Q14146 1524 aaKnown RBP17.56■□□□□ 0.4
NLRP3-207ENST00000474792 LAMC3Q9Y6N6 1575 aa17.54■□□□□ 0.4
NLRP3-207ENST00000474792 TDRD9Q8NDG6 1382 aaKnown RBP17.53■□□□□ 0.4
NLRP3-207ENST00000474792 EFCAB5A4FU69 1503 aa17.53■□□□□ 0.4
NLRP3-207ENST00000474792 SETD5Q9C0A6 1442 aa17.52■□□□□ 0.4
NLRP3-207ENST00000474792 FYCO1Q9BQS8 1478 aa17.52■□□□□ 0.4
NLRP3-207ENST00000474792 MAPKBP1O60336 1514 aa17.52■□□□□ 0.4
NLRP3-207ENST00000474792 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.39
NLRP3-207ENST00000474792 WDR97A6NE52 1622 aa17.52■□□□□ 0.39
NLRP3-207ENST00000474792 CASKIN1Q8WXD9 1431 aa17.49■□□□□ 0.39
NLRP3-207ENST00000474792 ABCA5Q8WWZ7 1642 aa17.46■□□□□ 0.39
NLRP3-207ENST00000474792 GAPVD1Q14C86 1478 aa17.45■□□□□ 0.38
NLRP3-207ENST00000474792 KIF21AQ7Z4S6 1674 aa17.45■□□□□ 0.38
NLRP3-207ENST00000474792 FMN1Q68DA7 1419 aa17.44■□□□□ 0.38
NLRP3-207ENST00000474792 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.38
NLRP3-207ENST00000474792 PDS5BQ9NTI5 1447 aa17.43■□□□□ 0.38
NLRP3-207ENST00000474792 SIN3AQ96ST3 1273 aa17.43■□□□□ 0.38
NLRP3-207ENST00000474792 SNAPC4Q5SXM2 1469 aa17.42■□□□□ 0.38
NLRP3-207ENST00000474792 MTUS2Q5JR59 1369 aa17.41■□□□□ 0.38
NLRP3-207ENST00000474792 LRRIQ1Q96JM4 1722 aa17.38■□□□□ 0.37
NLRP3-207ENST00000474792 SAMD9Q5K651 1589 aa17.38■□□□□ 0.37
NLRP3-207ENST00000474792 FGD6Q6ZV73 1430 aa17.37■□□□□ 0.37
NLRP3-207ENST00000474792 TARBP1Q13395 1621 aaKnown RBP17.32■□□□□ 0.36
NLRP3-207ENST00000474792 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.32■□□□□ 0.36
NLRP3-207ENST00000474792 GRIN2BQ13224 1484 aa17.31■□□□□ 0.36
NLRP3-207ENST00000474792 NCOA2Q15596 1464 aa17.3■□□□□ 0.36
NLRP3-207ENST00000474792 PTPRKQ15262 1439 aa17.29■□□□□ 0.36
NLRP3-207ENST00000474792 PBRM1Q86U86 1689 aa17.28■□□□□ 0.36
NLRP3-207ENST00000474792 CCDC18Q5T9S5 1454 aa17.28■□□□□ 0.36
NLRP3-207ENST00000474792 SUPT6HQ7KZ85 1726 aaKnown RBP17.27■□□□□ 0.36
NLRP3-207ENST00000474792 HIRIP3Q9BW71 556 aaPredicted RBP17.27■□□□□ 0.36
NLRP3-207ENST00000474792 MYOM3Q5VTT5 1437 aa17.26■□□□□ 0.35
NLRP3-207ENST00000474792 DDX10Q13206 875 aaKnown RBP17.25■□□□□ 0.35
NLRP3-207ENST00000474792 EHBP1L1Q8N3D4 1523 aa17.25■□□□□ 0.35
NLRP3-207ENST00000474792 ARID3CA6NKF2 412 aa17.24■□□□□ 0.35
NLRP3-207ENST00000474792 KCNH8Q96L42 1107 aa17.24■□□□□ 0.35
NLRP3-207ENST00000474792 THOC2Q8NI27 1593 aaKnown RBP17.24■□□□□ 0.35
NLRP3-207ENST00000474792 PTPN23Q9H3S7 1636 aa17.23■□□□□ 0.35
NLRP3-207ENST00000474792 HFM1A2PYH4 1435 aa17.23■□□□□ 0.35
NLRP3-207ENST00000474792 MAGI3Q5TCQ9 1506 aa17.23■□□□□ 0.35
NLRP3-207ENST00000474792 IQGAP2Q13576 1575 aa17.21■□□□□ 0.35
NLRP3-207ENST00000474792 PPP1R15AO75807 674 aaPredicted RBP17.2■□□□□ 0.34
NLRP3-207ENST00000474792 TONSLQ96HA7 1378 aa17.2■□□□□ 0.34
NLRP3-207ENST00000474792 TIMELESSQ9UNS1 1208 aa17.2■□□□□ 0.34
NLRP3-207ENST00000474792 NAIPQ13075 1403 aa17.2■□□□□ 0.34
NLRP3-207ENST00000474792 UGGT2Q9NYU1 1516 aa17.2■□□□□ 0.34
NLRP3-207ENST00000474792 ADAMTS12P58397 1594 aa17.19■□□□□ 0.34
NLRP3-207ENST00000474792 UACAQ9BZF9 1416 aa17.19■□□□□ 0.34
NLRP3-207ENST00000474792 CHIC2Q9UKJ5 165 aa17.19■□□□□ 0.34
NLRP3-207ENST00000474792 HECW1Q76N89 1606 aa17.18■□□□□ 0.34
NLRP3-207ENST00000474792 MRC2Q9UBG0 1479 aa17.18■□□□□ 0.34
NLRP3-207ENST00000474792 RRP7BPQ9NSQ0 103 aa17.17■□□□□ 0.34
NLRP3-207ENST00000474792 CDK13Q14004 1512 aaKnown RBP17.17■□□□□ 0.34
NLRP3-207ENST00000474792 EPRSP07814 1512 aaKnown RBP17.14■□□□□ 0.34
NLRP3-207ENST00000474792 ARHGEF11O15085 1522 aa17.14■□□□□ 0.33
NLRP3-207ENST00000474792 ZNF608Q9ULD9 1512 aaPredicted RBP17.14■□□□□ 0.33
NLRP3-207ENST00000474792 SUPT16HQ9Y5B9 1047 aaKnown RBP17.1■□□□□ 0.33
NLRP3-207ENST00000474792 WDR62O43379 1518 aa17.1■□□□□ 0.33
NLRP3-207ENST00000474792 TRIM52Q96A61 297 aa17.09■□□□□ 0.33
NLRP3-207ENST00000474792 TCOF1Q13428 1488 aaKnown RBP17.07■□□□□ 0.32
NLRP3-207ENST00000474792 GCC2Q8IWJ2 1684 aa17.07■□□□□ 0.32
NLRP3-207ENST00000474792 KDM6BO15054 1643 aa17.06■□□□□ 0.32
NLRP3-207ENST00000474792 IFT140Q96RY7 1462 aa17.06■□□□□ 0.32
NLRP3-207ENST00000474792 ANP32CO43423 234 aa17.03■□□□□ 0.32
NLRP3-207ENST00000474792 KIAA0556O60303 1618 aa17.02■□□□□ 0.32
NLRP3-207ENST00000474792 MIA2Q96PC5 1412 aa17.01■□□□□ 0.31
NLRP3-207ENST00000474792 DISP1Q96F81 1524 aa17.01■□□□□ 0.31
NLRP3-207ENST00000474792 EIF4G3O43432 1585 aaKnown RBP17■□□□□ 0.31
NLRP3-207ENST00000474792 DENND4BO75064 1496 aaPredicted RBP17■□□□□ 0.31
NLRP3-207ENST00000474792 KIAA0586Q9BVV6 1533 aa17■□□□□ 0.31
NLRP3-207ENST00000474792 KDM5BQ9UGL1 1544 aa17■□□□□ 0.31
NLRP3-207ENST00000474792 FOXD1Q16676 465 aa17■□□□□ 0.31
NLRP3-207ENST00000474792 GRIN2AQ12879 1464 aa16.98■□□□□ 0.31
NLRP3-207ENST00000474792 NUP153P49790 1475 aaKnown RBP16.97■□□□□ 0.31
NLRP3-207ENST00000474792 ZNF644Q9H582 1327 aaPredicted RBP16.97■□□□□ 0.31
NLRP3-207ENST00000474792 AKNAQ7Z591 1439 aa16.97■□□□□ 0.31
NLRP3-207ENST00000474792 MPHOSPH9Q99550 1183 aa16.97■□□□□ 0.31
NLRP3-207ENST00000474792 RAPGEF6Q8TEU7 1601 aa16.96■□□□□ 0.31
NLRP3-207ENST00000474792 ERCC6Q03468 1493 aa16.96■□□□□ 0.31
NLRP3-207ENST00000474792 FBLN2P98095 1184 aa16.95■□□□□ 0.3
NLRP3-207ENST00000474792 DAPK1P53355 1430 aa16.95■□□□□ 0.3
NLRP3-207ENST00000474792 CCER2I3L3R5 266 aa16.94■□□□□ 0.3
NLRP3-207ENST00000474792 BCANQ96GW7 911 aa16.93■□□□□ 0.3
NLRP3-207ENST00000474792 CHMP7Q8WUX9 453 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms