RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 CARMIL1Q5VZK9 1371 aa17.3■□□□□ 0.36
SP140-208ENST00000473711 ZNF608Q9ULD9 1512 aaPredicted RBP17.3■□□□□ 0.36
SP140-208ENST00000473711 RAPGEF2Q9Y4G8 1499 aa17.3■□□□□ 0.36
SP140-208ENST00000473711 KIF21BO75037 1637 aa17.29■□□□□ 0.36
SP140-208ENST00000473711 KCNA4P22459 653 aa17.29■□□□□ 0.36
SP140-208ENST00000473711 ABCA5Q8WWZ7 1642 aa17.28■□□□□ 0.36
SP140-208ENST00000473711 TNIKQ9UKE5 1360 aa17.25■□□□□ 0.35
SP140-208ENST00000473711 ERICH3Q5RHP9 1530 aa17.22■□□□□ 0.35
SP140-208ENST00000473711 GRIN2BQ13224 1484 aa17.21■□□□□ 0.35
SP140-208ENST00000473711 RNF39Q9H2S5 420 aa17.21■□□□□ 0.35
SP140-208ENST00000473711 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
SP140-208ENST00000473711 EIF4G3O43432 1585 aaKnown RBP17.17■□□□□ 0.34
SP140-208ENST00000473711 CUL7Q14999 1698 aa17.16■□□□□ 0.34
SP140-208ENST00000473711 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
SP140-208ENST00000473711 RANGAP1P46060 587 aaPredicted RBP17.15■□□□□ 0.34
SP140-208ENST00000473711 FHAD1B1AJZ9 1412 aa17.13■□□□□ 0.33
SP140-208ENST00000473711 CEP162Q5TB80 1403 aa17.13■□□□□ 0.33
SP140-208ENST00000473711 SNAPC4Q5SXM2 1469 aa17.12■□□□□ 0.33
SP140-208ENST00000473711 ADAMTS12P58397 1594 aa17.07■□□□□ 0.32
SP140-208ENST00000473711 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
SP140-208ENST00000473711 FBLN2P98095 1184 aa17.06■□□□□ 0.32
SP140-208ENST00000473711 MAGI1Q96QZ7 1491 aaPredicted RBP17.05■□□□□ 0.32
SP140-208ENST00000473711 CLIP1P30622 1438 aa17.05■□□□□ 0.32
SP140-208ENST00000473711 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.32
SP140-208ENST00000473711 SYNJ2O15056 1496 aa17.01■□□□□ 0.31
SP140-208ENST00000473711 C1QBPQ07021 282 aaKnown RBP16.99■□□□□ 0.31
SP140-208ENST00000473711 GRIN2AQ12879 1464 aa16.99■□□□□ 0.31
SP140-208ENST00000473711 P3H3Q8IVL6 736 aa16.94■□□□□ 0.3
SP140-208ENST00000473711 CTTNBP2Q8WZ74 1663 aa16.93■□□□□ 0.3
SP140-208ENST00000473711 ARHGAP35Q9NRY4 1499 aa16.92■□□□□ 0.3
SP140-208ENST00000473711 KIAA0586Q9BVV6 1533 aa16.89■□□□□ 0.29
SP140-208ENST00000473711 ARAP1Q96P48 1450 aa16.88■□□□□ 0.29
SP140-208ENST00000473711 NUP160Q12769 1436 aa16.87■□□□□ 0.29
SP140-208ENST00000473711 CEP170Q5SW79 1584 aa16.87■□□□□ 0.29
SP140-208ENST00000473711 IQGAP2Q13576 1575 aa16.85■□□□□ 0.29
SP140-208ENST00000473711 VPS8Q8N3P4 1428 aa16.85■□□□□ 0.29
SP140-208ENST00000473711 CHD1O14646 1710 aa16.83■□□□□ 0.28
SP140-208ENST00000473711 FHOD3Q2V2M9 1422 aa16.82■□□□□ 0.28
SP140-208ENST00000473711 PPARGC1BQ86YN6 1023 aaKnown RBP16.82■□□□□ 0.28
SP140-208ENST00000473711 JPH4Q96JJ6 628 aa16.82■□□□□ 0.28
SP140-208ENST00000473711 EFCAB5A4FU69 1503 aa16.81■□□□□ 0.28
SP140-208ENST00000473711 UGGT2Q9NYU1 1516 aa16.79■□□□□ 0.28
SP140-208ENST00000473711 SAMD9Q5K651 1589 aa16.77■□□□□ 0.28
SP140-208ENST00000473711 APLP2Q06481 763 aa16.77■□□□□ 0.28
SP140-208ENST00000473711 ATP1B4Q9UN42 357 aaPredicted RBP16.75■□□□□ 0.27
SP140-208ENST00000473711 TTBK1Q5TCY1 1321 aaPredicted RBP16.74■□□□□ 0.27
SP140-208ENST00000473711 DISP1Q96F81 1524 aa16.73■□□□□ 0.27
SP140-208ENST00000473711 FMN1Q68DA7 1419 aa16.7■□□□□ 0.26
SP140-208ENST00000473711 OSCARQ8IYS5 282 aa16.7■□□□□ 0.26
SP140-208ENST00000473711 CARMIL2Q6F5E8 1435 aa16.7■□□□□ 0.26
SP140-208ENST00000473711 KIAA0556O60303 1618 aa16.69■□□□□ 0.26
SP140-208ENST00000473711 PRG4Q92954 1404 aaPredicted RBP16.69■□□□□ 0.26
SP140-208ENST00000473711 CASKIN1Q8WXD9 1431 aa16.66■□□□□ 0.26
SP140-208ENST00000473711 U3KPZ7 1027 aaPredicted RBP16.66■□□□□ 0.26
SP140-208ENST00000473711 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
SP140-208ENST00000473711 PCF11O94913 1555 aaKnown RBP16.64■□□□□ 0.25
SP140-208ENST00000473711 KANK4Q5T7N3 995 aaPredicted RBP16.63■□□□□ 0.25
SP140-208ENST00000473711 TRIM26Q12899 539 aaPredicted RBP16.62■□□□□ 0.25
SP140-208ENST00000473711 SHROOM2Q13796 1616 aa16.62■□□□□ 0.25
SP140-208ENST00000473711 FYCO1Q9BQS8 1478 aa16.61■□□□□ 0.25
SP140-208ENST00000473711 SLC4A2P04920 1241 aa16.6■□□□□ 0.25
SP140-208ENST00000473711 ARID3CA6NKF2 412 aa16.58■□□□□ 0.24
SP140-208ENST00000473711 PCGF6Q9BYE7 350 aa16.58■□□□□ 0.24
SP140-208ENST00000473711 PTPRGP23470 1445 aa16.58■□□□□ 0.24
SP140-208ENST00000473711 ERCC6L2Q5T890 1561 aa16.57■□□□□ 0.24
SP140-208ENST00000473711 MAP3K1Q13233 1512 aa16.55■□□□□ 0.24
SP140-208ENST00000473711 RIMBP3CA6NJZ7 1639 aa16.55■□□□□ 0.24
SP140-208ENST00000473711 RIMBP3BA6NNM3 1639 aa16.55■□□□□ 0.24
SP140-208ENST00000473711 RIMBP3Q9UFD9 1639 aa16.55■□□□□ 0.24
SP140-208ENST00000473711 TIAM1Q13009 1591 aa16.55■□□□□ 0.24
SP140-208ENST00000473711 PLB1Q6P1J6 1458 aa16.54■□□□□ 0.24
SP140-208ENST00000473711 HECW1Q76N89 1606 aa16.52■□□□□ 0.23
SP140-208ENST00000473711 LRRC9Q6ZRR7 1453 aa16.51■□□□□ 0.23
SP140-208ENST00000473711 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
SP140-208ENST00000473711 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
SP140-208ENST00000473711 RAPGEF6Q8TEU7 1601 aa16.51■□□□□ 0.23
SP140-208ENST00000473711 EPRSP07814 1512 aaKnown RBP16.5■□□□□ 0.23
SP140-208ENST00000473711 NUP153P49790 1475 aaKnown RBP16.48■□□□□ 0.23
SP140-208ENST00000473711 CCDC18Q5T9S5 1454 aa16.48■□□□□ 0.23
SP140-208ENST00000473711 CFAP43Q8NDM7 1665 aa16.48■□□□□ 0.23
SP140-208ENST00000473711 LRRIQ1Q96JM4 1722 aa16.48■□□□□ 0.23
SP140-208ENST00000473711 ABCA8O94911 1581 aa16.47■□□□□ 0.23
SP140-208ENST00000473711 CDK13Q14004 1512 aaKnown RBP16.47■□□□□ 0.23
SP140-208ENST00000473711 MTUS2Q5JR59 1369 aa16.47■□□□□ 0.23
SP140-208ENST00000473711 UACAQ9BZF9 1416 aa16.46■□□□□ 0.23
SP140-208ENST00000473711 CDK11AQ9UQ88 783 aaPredicted RBP16.43■□□□□ 0.22
SP140-208ENST00000473711 ATP10BO94823 1461 aa16.41■□□□□ 0.22
SP140-208ENST00000473711 MAGI3Q5TCQ9 1506 aa16.4■□□□□ 0.22
SP140-208ENST00000473711 SLC4A1APQ9BWU0 796 aaKnown RBP16.39■□□□□ 0.21
SP140-208ENST00000473711 PLEKHD1A6NEE1 506 aa16.38■□□□□ 0.21
SP140-208ENST00000473711 PHLDB1Q86UU1 1377 aa16.38■□□□□ 0.21
SP140-208ENST00000473711 EHBP1L1Q8N3D4 1523 aa16.37■□□□□ 0.21
SP140-208ENST00000473711 ABCC2Q92887 1545 aa16.37■□□□□ 0.21
SP140-208ENST00000473711 UHRF1BP1LA0JNW5 1464 aa16.35■□□□□ 0.21
SP140-208ENST00000473711 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
SP140-208ENST00000473711 CAPN15O75808 1086 aa16.34■□□□□ 0.21
SP140-208ENST00000473711 SPINK5Q9NQ38 1064 aaPredicted RBP16.34■□□□□ 0.21
SP140-208ENST00000473711 NCOA2Q15596 1464 aa16.34■□□□□ 0.21
SP140-208ENST00000473711 TROQ12816 1431 aaPredicted RBP16.33■□□□□ 0.2
SP140-208ENST00000473711 SUPT6HQ7KZ85 1726 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms