RNA–Protein interactions for RNA: ENST00000472161.1

RPS3AP49-201, Transcript of ribosomal protein S3a pseudogene 49, humanhuman

BASIC

Gene RPS3AP49, Length 790 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP49-201ENST00000472161 TOPBP1Q92547 1522 aa12.51□□□□□ -0.41
RPS3AP49-201ENST00000472161 DNMBPQ6XZF7 1577 aa12.5□□□□□ -0.41
RPS3AP49-201ENST00000472161 REM2Q8IYK8 340 aaPredicted RBP12.47□□□□□ -0.41
RPS3AP49-201ENST00000472161 FBLN2P98095 1184 aa12.46□□□□□ -0.41
RPS3AP49-201ENST00000472161 TARBP1Q13395 1621 aaKnown RBP12.46□□□□□ -0.41
RPS3AP49-201ENST00000472161 ZNF608Q9ULD9 1512 aaPredicted RBP12.44□□□□□ -0.42
RPS3AP49-201ENST00000472161 EIF4G3O43432 1585 aaKnown RBP12.43□□□□□ -0.42
RPS3AP49-201ENST00000472161 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
RPS3AP49-201ENST00000472161 IFT140Q96RY7 1462 aa12.4□□□□□ -0.42
RPS3AP49-201ENST00000472161 CUX1P39880 1505 aa12.4□□□□□ -0.42
RPS3AP49-201ENST00000472161 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.43
RPS3AP49-201ENST00000472161 ABCC8Q09428 1581 aa12.39□□□□□ -0.43
RPS3AP49-201ENST00000472161 WDR97A6NE52 1622 aa12.38□□□□□ -0.43
RPS3AP49-201ENST00000472161 SPDYE2BA6NHP3 402 aa12.36□□□□□ -0.43
RPS3AP49-201ENST00000472161 SPDYE6P0CI01 402 aa12.36□□□□□ -0.43
RPS3AP49-201ENST00000472161 SPDYE2Q495Y8 402 aa12.36□□□□□ -0.43
RPS3AP49-201ENST00000472161 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
RPS3AP49-201ENST00000472161 FGD5Q6ZNL6 1462 aa12.34□□□□□ -0.43
RPS3AP49-201ENST00000472161 SUPT5HO00267 1087 aaKnown RBP12.33□□□□□ -0.44
RPS3AP49-201ENST00000472161 CHD1O14646 1710 aa12.32□□□□□ -0.44
RPS3AP49-201ENST00000472161 RAD54L2Q9Y4B4 1467 aa12.32□□□□□ -0.44
RPS3AP49-201ENST00000472161 PIP4P2Q8N4L2 257 aa12.29□□□□□ -0.44
RPS3AP49-201ENST00000472161 BIVM-ERCC5R4GMW8 1640 aa12.29□□□□□ -0.44
RPS3AP49-201ENST00000472161 AQRO60306 1485 aaKnown RBP eCLIP12.28□□□□□ -0.44
RPS3AP49-201ENST00000472161 SYNJ1O43426 1573 aa12.28□□□□□ -0.44
RPS3AP49-201ENST00000472161 ABCA5Q8WWZ7 1642 aa12.26□□□□□ -0.45
RPS3AP49-201ENST00000472161 PBRM1Q86U86 1689 aa12.26□□□□□ -0.45
RPS3AP49-201ENST00000472161 TOP2BQ02880 1626 aa12.25□□□□□ -0.45
RPS3AP49-201ENST00000472161 SOGA1O94964 1423 aa12.24□□□□□ -0.45
RPS3AP49-201ENST00000472161 ZNF692Q9BU19 519 aaPredicted RBP12.24□□□□□ -0.45
RPS3AP49-201ENST00000472161 SSUH2Q9Y2M2 353 aa12.22□□□□□ -0.45
RPS3AP49-201ENST00000472161 FXR2P51116 673 aaKnown RBP eCLIP12.21□□□□□ -0.45
RPS3AP49-201ENST00000472161 RIMBP3CA6NJZ7 1639 aa12.21□□□□□ -0.46
RPS3AP49-201ENST00000472161 RIMBP3BA6NNM3 1639 aa12.21□□□□□ -0.46
RPS3AP49-201ENST00000472161 RIMBP3Q9UFD9 1639 aa12.21□□□□□ -0.46
RPS3AP49-201ENST00000472161 SNAPC4Q5SXM2 1469 aa12.21□□□□□ -0.46
RPS3AP49-201ENST00000472161 TDRD9Q8NDG6 1382 aaKnown RBP12.2□□□□□ -0.46
RPS3AP49-201ENST00000472161 ABCA10Q8WWZ4 1543 aa12.2□□□□□ -0.46
RPS3AP49-201ENST00000472161 WRNQ14191 1432 aaPredicted RBP eCLIP12.17□□□□□ -0.46
RPS3AP49-201ENST00000472161 CLASP1Q7Z460 1538 aa12.16□□□□□ -0.46
RPS3AP49-201ENST00000472161 MAGI1Q96QZ7 1491 aaPredicted RBP12.16□□□□□ -0.46
RPS3AP49-201ENST00000472161 ARHGEF11O15085 1522 aa12.16□□□□□ -0.46
RPS3AP49-201ENST00000472161 GRIN2BQ13224 1484 aa12.15□□□□□ -0.46
RPS3AP49-201ENST00000472161 CLEC11AQ9Y240 323 aa12.14□□□□□ -0.47
RPS3AP49-201ENST00000472161 GAPVD1Q14C86 1478 aa12.14□□□□□ -0.47
RPS3AP49-201ENST00000472161 ADAMTS12P58397 1594 aa12.13□□□□□ -0.47
RPS3AP49-201ENST00000472161 SPDYE1Q8NFV5 336 aaPredicted RBP12.13□□□□□ -0.47
RPS3AP49-201ENST00000472161 SYNJ2O15056 1496 aa12.12□□□□□ -0.47
RPS3AP49-201ENST00000472161 ARAP1Q96P48 1450 aa12.07□□□□□ -0.48
RPS3AP49-201ENST00000472161 CEP170Q5SW79 1584 aa12.06□□□□□ -0.48
RPS3AP49-201ENST00000472161 HAX1O00165 279 aa12.05□□□□□ -0.48
RPS3AP49-201ENST00000472161 SP7Q8TDD2 431 aaPredicted RBP12.05□□□□□ -0.48
RPS3AP49-201ENST00000472161 ERICH3Q5RHP9 1530 aa12.05□□□□□ -0.48
RPS3AP49-201ENST00000472161 GRIN2AQ12879 1464 aa12.04□□□□□ -0.48
RPS3AP49-201ENST00000472161 TRIM41Q8WV44 630 aa12.03□□□□□ -0.48
RPS3AP49-201ENST00000472161 PRKAR2AP13861 404 aaKnown RBP12.02□□□□□ -0.49
RPS3AP49-201ENST00000472161 SHROOM2Q13796 1616 aa12.01□□□□□ -0.49
RPS3AP49-201ENST00000472161 ERCC6L2Q5T890 1561 aa12.01□□□□□ -0.49
RPS3AP49-201ENST00000472161 NUP160Q12769 1436 aa12□□□□□ -0.49
RPS3AP49-201ENST00000472161 RUSC2Q8N2Y8 1516 aa11.98□□□□□ -0.49
RPS3AP49-201ENST00000472161 FHAD1B1AJZ9 1412 aa11.97□□□□□ -0.49
RPS3AP49-201ENST00000472161 CHMP7Q8WUX9 453 aaPredicted RBP11.96□□□□□ -0.49
RPS3AP49-201ENST00000472161 CUL7Q14999 1698 aa11.95□□□□□ -0.5
RPS3AP49-201ENST00000472161 EVX2Q03828 476 aa11.95□□□□□ -0.5
RPS3AP49-201ENST00000472161 PRR29P0C7W0 189 aa11.93□□□□□ -0.5
RPS3AP49-201ENST00000472161 CHADLQ6NUI6 762 aa11.93□□□□□ -0.5
RPS3AP49-201ENST00000472161 KIF27Q86VH2 1401 aa11.87□□□□□ -0.51
RPS3AP49-201ENST00000472161 CYB5RLQ6IPT4 315 aa11.87□□□□□ -0.51
RPS3AP49-201ENST00000472161 IGF1RP08069 1367 aa11.87□□□□□ -0.51
RPS3AP49-201ENST00000472161 SPDYE4A6NLX3 237 aa11.84□□□□□ -0.51
RPS3AP49-201ENST00000472161 C19orf67A6NJJ6 358 aa11.82□□□□□ -0.52
RPS3AP49-201ENST00000472161 PRG4Q92954 1404 aaPredicted RBP11.8□□□□□ -0.52
RPS3AP49-201ENST00000472161 KIAA0586Q9BVV6 1533 aa11.8□□□□□ -0.52
RPS3AP49-201ENST00000472161 ADCY10Q96PN6 1610 aa11.78□□□□□ -0.52
RPS3AP49-201ENST00000472161 IQGAP2Q13576 1575 aa11.77□□□□□ -0.53
RPS3AP49-201ENST00000472161 CTTNBP2Q8WZ74 1663 aa11.76□□□□□ -0.53
RPS3AP49-201ENST00000472161 CARMIL1Q5VZK9 1371 aa11.76□□□□□ -0.53
RPS3AP49-201ENST00000472161 KIF13AQ9H1H9 1805 aa11.75□□□□□ -0.53
RPS3AP49-201ENST00000472161 JPH4Q96JJ6 628 aa11.72□□□□□ -0.53
RPS3AP49-201ENST00000472161 FARP1Q9Y4F1 1045 aaPredicted RBP11.72□□□□□ -0.53
RPS3AP49-201ENST00000472161 DISP1Q96F81 1524 aa11.71□□□□□ -0.53
RPS3AP49-201ENST00000472161 RAPGEF2Q9Y4G8 1499 aa11.71□□□□□ -0.53
RPS3AP49-201ENST00000472161 UGGT2Q9NYU1 1516 aa11.7□□□□□ -0.54
RPS3AP49-201ENST00000472161 PRXQ9BXM0 1461 aa11.7□□□□□ -0.54
RPS3AP49-201ENST00000472161 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
RPS3AP49-201ENST00000472161 KIAA0556O60303 1618 aa11.7□□□□□ -0.54
RPS3AP49-201ENST00000472161 MAPKBP1O60336 1514 aa11.68□□□□□ -0.54
RPS3AP49-201ENST00000472161 CREBZFQ9NS37 354 aa11.67□□□□□ -0.54
RPS3AP49-201ENST00000472161 DIP2BQ9P265 1576 aa11.67□□□□□ -0.54
RPS3AP49-201ENST00000472161 GABBR2O75899 941 aa11.64□□□□□ -0.55
RPS3AP49-201ENST00000472161 CD44P16070 742 aaKnown RBP11.64□□□□□ -0.55
RPS3AP49-201ENST00000472161 ABCC2Q92887 1545 aa11.61□□□□□ -0.55
RPS3AP49-201ENST00000472161 UHRF1BP1LA0JNW5 1464 aa11.6□□□□□ -0.55
RPS3AP49-201ENST00000472161 ABCC10Q5T3U5 1492 aa11.6□□□□□ -0.55
RPS3AP49-201ENST00000472161 TNIKQ9UKE5 1360 aa11.6□□□□□ -0.55
RPS3AP49-201ENST00000472161 CARMIL2Q6F5E8 1435 aa11.6□□□□□ -0.55
RPS3AP49-201ENST00000472161 SAMD9Q5K651 1589 aa11.59□□□□□ -0.55
RPS3AP49-201ENST00000472161 ZCCHC11Q5TAX3 1644 aaKnown RBP11.59□□□□□ -0.55
RPS3AP49-201ENST00000472161 PTPRGP23470 1445 aa11.58□□□□□ -0.56
RPS3AP49-201ENST00000472161 PPRC1Q5VV67 1664 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms