RNA–Protein interactions for RNA: ENST00000468878.1

TRIM46-207, Transcript of tripartite motif containing 46, humanhuman

TSL 2

Gene TRIM46, Length 3,318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-207ENST00000468878 HMGXB3Q12766 1538 aa25.12■■□□□ 1.61
TRIM46-207ENST00000468878 DDX10Q13206 875 aaKnown RBP25.11■■□□□ 1.61
TRIM46-207ENST00000468878 FANCD2Q9BXW9 1451 aa25.1■■□□□ 1.61
TRIM46-207ENST00000468878 CNGB1Q14028 1251 aaPredicted RBP25.1■■□□□ 1.61
TRIM46-207ENST00000468878 FBLN2P98095 1184 aa25.08■■□□□ 1.61
TRIM46-207ENST00000468878 RAB3GAP2Q9H2M9 1393 aa25.06■■□□□ 1.6
TRIM46-207ENST00000468878 CC2D2AQ9P2K1 1620 aa25.04■■□□□ 1.6
TRIM46-207ENST00000468878 TRIM52Q96A61 297 aa25.04■■□□□ 1.6
TRIM46-207ENST00000468878 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
TRIM46-207ENST00000468878 KCNH8Q96L42 1107 aa25.01■■□□□ 1.59
TRIM46-207ENST00000468878 ERICH3Q5RHP9 1530 aa25■■□□□ 1.59
TRIM46-207ENST00000468878 RRP7BPQ9NSQ0 103 aa24.99■■□□□ 1.59
TRIM46-207ENST00000468878 MTUS2Q5JR59 1369 aa24.98■■□□□ 1.59
TRIM46-207ENST00000468878 PHLDB1Q86UU1 1377 aa24.98■■□□□ 1.59
TRIM46-207ENST00000468878 BCANQ96GW7 911 aa24.96■■□□□ 1.59
TRIM46-207ENST00000468878 POLR3GLQ9BT43 218 aa24.83■■□□□ 1.57
TRIM46-207ENST00000468878 SETD5Q9C0A6 1442 aa24.82■■□□□ 1.56
TRIM46-207ENST00000468878 POLA1P09884 1462 aaPredicted RBP24.82■■□□□ 1.56
TRIM46-207ENST00000468878 FHAD1B1AJZ9 1412 aa24.81■■□□□ 1.56
TRIM46-207ENST00000468878 RRBP1Q9P2E9 1410 aaKnown RBP24.8■■□□□ 1.56
TRIM46-207ENST00000468878 ZNF777Q9ULD5 760 aaPredicted RBP24.8■■□□□ 1.56
TRIM46-207ENST00000468878 FOXD1Q16676 465 aa24.78■■□□□ 1.56
TRIM46-207ENST00000468878 CLSPNQ9HAW4 1339 aa24.78■■□□□ 1.56
TRIM46-207ENST00000468878 LRRC9Q6ZRR7 1453 aa24.76■■□□□ 1.55
TRIM46-207ENST00000468878 TOPBP1Q92547 1522 aa24.76■■□□□ 1.55
TRIM46-207ENST00000468878 TONSLQ96HA7 1378 aa24.74■■□□□ 1.55
TRIM46-207ENST00000468878 ZNF326Q5BKZ1 582 aaKnown RBP24.72■■□□□ 1.55
TRIM46-207ENST00000468878 AQRO60306 1485 aaKnown RBP eCLIP24.66■■□□□ 1.54
TRIM46-207ENST00000468878 TIAM1Q13009 1591 aa24.65■■□□□ 1.54
TRIM46-207ENST00000468878 ANP32CO43423 234 aa24.63■■□□□ 1.53
TRIM46-207ENST00000468878 SENP3-EIF4A1A0A087X0R7 540 aa24.62■■□□□ 1.53
TRIM46-207ENST00000468878 GAPVD1Q14C86 1478 aa24.61■■□□□ 1.53
TRIM46-207ENST00000468878 PDS5BQ9NTI5 1447 aa24.61■■□□□ 1.53
TRIM46-207ENST00000468878 PCF11O94913 1555 aaKnown RBP24.61■■□□□ 1.53
TRIM46-207ENST00000468878 URB2Q14146 1524 aaKnown RBP24.58■■□□□ 1.53
TRIM46-207ENST00000468878 CHMP7Q8WUX9 453 aaPredicted RBP24.56■■□□□ 1.52
TRIM46-207ENST00000468878 PPP1R15AO75807 674 aaPredicted RBP24.56■■□□□ 1.52
TRIM46-207ENST00000468878 FMN1Q68DA7 1419 aa24.55■■□□□ 1.52
TRIM46-207ENST00000468878 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
TRIM46-207ENST00000468878 FKBP8Q14318 412 aa24.53■■□□□ 1.52
TRIM46-207ENST00000468878 ABCA10Q8WWZ4 1543 aa24.52■■□□□ 1.52
TRIM46-207ENST00000468878 ZNF644Q9H582 1327 aaPredicted RBP24.5■■□□□ 1.51
TRIM46-207ENST00000468878 SUPT16HQ9Y5B9 1047 aaKnown RBP24.5■■□□□ 1.51
TRIM46-207ENST00000468878 FGD6Q6ZV73 1430 aa24.48■■□□□ 1.51
TRIM46-207ENST00000468878 NEFLP07196 543 aa24.48■■□□□ 1.51
TRIM46-207ENST00000468878 IRX6P78412 446 aaPredicted RBP24.47■■□□□ 1.51
TRIM46-207ENST00000468878 WDR97A6NE52 1622 aa24.47■■□□□ 1.51
TRIM46-207ENST00000468878 CASKIN1Q8WXD9 1431 aa24.47■■□□□ 1.51
TRIM46-207ENST00000468878 SLC4A1APQ9BWU0 796 aaKnown RBP24.42■■□□□ 1.5
TRIM46-207ENST00000468878 MAPKBP1O60336 1514 aa24.42■■□□□ 1.5
TRIM46-207ENST00000468878 HNRNPUQ00839 825 aaKnown RBP eCLIP24.4■■□□□ 1.5
TRIM46-207ENST00000468878 PTPRKQ15262 1439 aa24.4■■□□□ 1.5
TRIM46-207ENST00000468878 CCDC18Q5T9S5 1454 aa24.4■■□□□ 1.5
TRIM46-207ENST00000468878 NCOA2Q15596 1464 aa24.38■■□□□ 1.49
TRIM46-207ENST00000468878 FYCO1Q9BQS8 1478 aa24.38■■□□□ 1.49
TRIM46-207ENST00000468878 FAM9BQ8IZU0 186 aa24.37■■□□□ 1.49
TRIM46-207ENST00000468878 MPHOSPH9Q99550 1183 aa24.35■■□□□ 1.49
TRIM46-207ENST00000468878 CFDP1Q9UEE9 299 aaPredicted RBP24.35■■□□□ 1.49
TRIM46-207ENST00000468878 CDK11AQ9UQ88 783 aaPredicted RBP24.34■■□□□ 1.49
TRIM46-207ENST00000468878 ERCC6Q03468 1493 aa24.33■■□□□ 1.49
TRIM46-207ENST00000468878 HSPA5P11021 654 aaKnown RBP24.33■■□□□ 1.49
TRIM46-207ENST00000468878 KDM2AQ9Y2K7 1162 aa24.32■■□□□ 1.48
TRIM46-207ENST00000468878 L3MBTL2Q969R5 705 aa24.32■■□□□ 1.48
TRIM46-207ENST00000468878 MYOM3Q5VTT5 1437 aa24.29■■□□□ 1.48
TRIM46-207ENST00000468878 CDK13Q14004 1512 aaKnown RBP24.29■■□□□ 1.48
TRIM46-207ENST00000468878 ZNF608Q9ULD9 1512 aaPredicted RBP24.28■■□□□ 1.48
TRIM46-207ENST00000468878 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
TRIM46-207ENST00000468878 EIF4G2P78344 907 aaKnown RBP eCLIP24.27■■□□□ 1.48
TRIM46-207ENST00000468878 EFCAB5A4FU69 1503 aa24.23■■□□□ 1.47
TRIM46-207ENST00000468878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.22■■□□□ 1.47
TRIM46-207ENST00000468878 LAMC3Q9Y6N6 1575 aa24.22■■□□□ 1.47
TRIM46-207ENST00000468878 NAIPQ13075 1403 aa24.21■■□□□ 1.47
TRIM46-207ENST00000468878 MAP3K1Q13233 1512 aa24.2■■□□□ 1.46
TRIM46-207ENST00000468878 TIMELESSQ9UNS1 1208 aa24.18■■□□□ 1.46
TRIM46-207ENST00000468878 SNAPC4Q5SXM2 1469 aa24.17■■□□□ 1.46
TRIM46-207ENST00000468878 KIF21AQ7Z4S6 1674 aa24.17■■□□□ 1.46
TRIM46-207ENST00000468878 UACAQ9BZF9 1416 aa24.16■■□□□ 1.46
TRIM46-207ENST00000468878 JPH4Q96JJ6 628 aa24.16■■□□□ 1.46
TRIM46-207ENST00000468878 CUL7Q14999 1698 aa24.16■■□□□ 1.46
TRIM46-207ENST00000468878 MYT1LQ9UL68 1186 aa24.16■■□□□ 1.46
TRIM46-207ENST00000468878 PLEKHD1A6NEE1 506 aa24.15■■□□□ 1.46
TRIM46-207ENST00000468878 MRS2Q9HD23 443 aa24.14■■□□□ 1.46
TRIM46-207ENST00000468878 HFM1A2PYH4 1435 aa24.13■■□□□ 1.45
TRIM46-207ENST00000468878 RGL3Q3MIN7 710 aa24.13■■□□□ 1.45
TRIM46-207ENST00000468878 SALL2Q9Y467 1007 aaPredicted RBP24.11■■□□□ 1.45
TRIM46-207ENST00000468878 PKD2Q13563 968 aa24.1■■□□□ 1.45
TRIM46-207ENST00000468878 CCDC184Q52MB2 194 aa24.1■■□□□ 1.45
TRIM46-207ENST00000468878 CTTNBP2Q8WZ74 1663 aa24.09■■□□□ 1.45
TRIM46-207ENST00000468878 HNRNPMP52272 730 aaKnown RBP eCLIP24.09■■□□□ 1.45
TRIM46-207ENST00000468878 WASHC2AQ641Q2 1341 aa24.09■■□□□ 1.45
TRIM46-207ENST00000468878 PRG4Q92954 1404 aaPredicted RBP24.08■■□□□ 1.45
TRIM46-207ENST00000468878 CFAP43Q8NDM7 1665 aa24.08■■□□□ 1.44
TRIM46-207ENST00000468878 EPRSP07814 1512 aaKnown RBP24.08■■□□□ 1.44
TRIM46-207ENST00000468878 C11orf95C9JLR9 678 aaPredicted RBP24.07■■□□□ 1.44
TRIM46-207ENST00000468878 TSPY4P0CV99 314 aa24.07■■□□□ 1.44
TRIM46-207ENST00000468878 TSPY10P0CW01 314 aa24.07■■□□□ 1.44
TRIM46-207ENST00000468878 NBPF8Q3BBV2 869 aa24.07■■□□□ 1.44
TRIM46-207ENST00000468878 GRIN2BQ13224 1484 aa24.07■■□□□ 1.44
TRIM46-207ENST00000468878 MAGI3Q5TCQ9 1506 aa24.05■■□□□ 1.44
TRIM46-207ENST00000468878 MRC2Q9UBG0 1479 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms