RNA–Protein interactions for RNA: ENST00000468878.1

TRIM46-207, Transcript of tripartite motif containing 46, humanhuman

TSL 2

Gene TRIM46, Length 3,318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-207ENST00000468878 NISCHQ9Y2I1 1504 aa34.91■■■■□ 3.18
TRIM46-207ENST00000468878 SHROOM4Q9ULL8 1493 aa31.3■■■□□ 2.6
TRIM46-207ENST00000468878 DCAF8L2P0C7V8 631 aa31.15■■■□□ 2.58
TRIM46-207ENST00000468878 SUPT5HO00267 1087 aaKnown RBP30.78■■■□□ 2.52
TRIM46-207ENST00000468878 ZCCHC6Q5VYS8 1495 aaKnown RBP29.31■■■□□ 2.28
TRIM46-207ENST00000468878 CHIC1Q5VXU3 224 aa29.07■■■□□ 2.24
TRIM46-207ENST00000468878 EHMT2Q96KQ7 1210 aa29.04■■■□□ 2.24
TRIM46-207ENST00000468878 CCDC180Q9P1Z9 1646 aa29.02■■■□□ 2.24
TRIM46-207ENST00000468878 LOC105371045A0A1W2PR82 267 aa28.78■■■□□ 2.2
TRIM46-207ENST00000468878 PCGF6Q9BYE7 350 aa28.74■■■□□ 2.19
TRIM46-207ENST00000468878 FAM9AQ8IZU1 332 aaPredicted RBP28.72■■■□□ 2.19
TRIM46-207ENST00000468878 MYO15BQ96JP2 1530 aa28.64■■■□□ 2.18
TRIM46-207ENST00000468878 ABCC9O60706 1549 aa28.55■■■□□ 2.16
TRIM46-207ENST00000468878 SCRIBQ14160 1630 aa28.31■■■□□ 2.12
TRIM46-207ENST00000468878 TRIM41Q8WV44 630 aa28.29■■■□□ 2.12
TRIM46-207ENST00000468878 PPARGC1BQ86YN6 1023 aaKnown RBP28.11■■■□□ 2.09
TRIM46-207ENST00000468878 HRCP23327 699 aa27.98■■■□□ 2.07
TRIM46-207ENST00000468878 TTBK1Q5TCY1 1321 aaPredicted RBP27.94■■■□□ 2.06
TRIM46-207ENST00000468878 DCAF1Q9Y4B6 1507 aa27.94■■■□□ 2.06
TRIM46-207ENST00000468878 RSF1Q96T23 1441 aaPredicted RBP27.86■■■□□ 2.05
TRIM46-207ENST00000468878 PABPN1Q86U42 306 aaKnown RBP eCLIP27.79■■■□□ 2.04
TRIM46-207ENST00000468878 CECR2Q9BXF3 1484 aa27.71■■■□□ 2.03
TRIM46-207ENST00000468878 TRIM26Q12899 539 aaPredicted RBP27.61■■■□□ 2.01
TRIM46-207ENST00000468878 RB1CC1Q8TDY2 1594 aa27.53■■■□□ 2
TRIM46-207ENST00000468878 RANGAP1P46060 587 aaPredicted RBP27.44■■□□□ 1.98
TRIM46-207ENST00000468878 MROH2BQ7Z745 1585 aa27.39■■□□□ 1.97
TRIM46-207ENST00000468878 NACADO15069 1562 aa27.26■■□□□ 1.95
TRIM46-207ENST00000468878 UBTFP17480 764 aaKnown RBP27.25■■□□□ 1.95
TRIM46-207ENST00000468878 WIZO95785 1651 aa27.2■■□□□ 1.94
TRIM46-207ENST00000468878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.11■■□□□ 1.93
TRIM46-207ENST00000468878 CCER1Q8TC90 406 aaPredicted RBP27.03■■□□□ 1.92
TRIM46-207ENST00000468878 ABCC8Q09428 1581 aa26.88■■□□□ 1.89
TRIM46-207ENST00000468878 BAZ1AQ9NRL2 1556 aaPredicted RBP26.8■■□□□ 1.88
TRIM46-207ENST00000468878 ZEB1P37275 1124 aaPredicted RBP26.78■■□□□ 1.88
TRIM46-207ENST00000468878 CCDC88BA6NC98 1476 aa26.75■■□□□ 1.87
TRIM46-207ENST00000468878 CSRNP3Q8WYN3 585 aa26.73■■□□□ 1.87
TRIM46-207ENST00000468878 SOGA1O94964 1423 aa26.72■■□□□ 1.87
TRIM46-207ENST00000468878 HNRNPUL2Q1KMD3 747 aaKnown RBP26.69■■□□□ 1.86
TRIM46-207ENST00000468878 APLP2Q06481 763 aa26.62■■□□□ 1.85
TRIM46-207ENST00000468878 RUSC2Q8N2Y8 1516 aa26.57■■□□□ 1.84
TRIM46-207ENST00000468878 PELP1Q8IZL8 1130 aaKnown RBP26.54■■□□□ 1.84
TRIM46-207ENST00000468878 SMARCA4P51532 1647 aa26.52■■□□□ 1.84
TRIM46-207ENST00000468878 TOP2AP11388 1531 aaKnown RBP26.45■■□□□ 1.82
TRIM46-207ENST00000468878 CEP162Q5TB80 1403 aa26.45■■□□□ 1.82
TRIM46-207ENST00000468878 SMARCA2P51531 1590 aa26.38■■□□□ 1.81
TRIM46-207ENST00000468878 WRNQ14191 1432 aaPredicted RBP eCLIP26.37■■□□□ 1.81
TRIM46-207ENST00000468878 ITGAEP38570 1179 aa26.33■■□□□ 1.81
TRIM46-207ENST00000468878 ATP1B4Q9UN42 357 aaPredicted RBP26.32■■□□□ 1.8
TRIM46-207ENST00000468878 UNC13AQ9UPW8 1703 aa26.27■■□□□ 1.8
TRIM46-207ENST00000468878 YTHDC1Q96MU7 727 aaKnown RBP26.26■■□□□ 1.79
TRIM46-207ENST00000468878 BAZ1BQ9UIG0 1483 aaKnown RBP26.26■■□□□ 1.79
TRIM46-207ENST00000468878 TNIKQ9UKE5 1360 aa26.17■■□□□ 1.78
TRIM46-207ENST00000468878 DIEXFQ68CQ4 756 aaKnown RBP26.17■■□□□ 1.78
TRIM46-207ENST00000468878 BICRAQ9NZM4 1560 aa26.15■■□□□ 1.78
TRIM46-207ENST00000468878 ATAD2BQ9ULI0 1458 aa26.12■■□□□ 1.77
TRIM46-207ENST00000468878 SCAF1Q9H7N4 1312 aaKnown RBP26.09■■□□□ 1.77
TRIM46-207ENST00000468878 GOLGA3Q08378 1498 aa26.08■■□□□ 1.77
TRIM46-207ENST00000468878 CLIP1P30622 1438 aa26.08■■□□□ 1.76
TRIM46-207ENST00000468878 P3H3Q8IVL6 736 aa26.06■■□□□ 1.76
TRIM46-207ENST00000468878 EIF4G1Q04637 1599 aaKnown RBP25.99■■□□□ 1.75
TRIM46-207ENST00000468878 EEA1Q15075 1411 aa25.94■■□□□ 1.74
TRIM46-207ENST00000468878 RAPGEF2Q9Y4G8 1499 aa25.94■■□□□ 1.74
TRIM46-207ENST00000468878 SYNJ1O43426 1573 aa25.93■■□□□ 1.74
TRIM46-207ENST00000468878 CEP164Q9UPV0 1460 aa25.88■■□□□ 1.73
TRIM46-207ENST00000468878 NEUROD1Q13562 356 aa25.83■■□□□ 1.72
TRIM46-207ENST00000468878 KANK4Q5T7N3 995 aaPredicted RBP25.82■■□□□ 1.72
TRIM46-207ENST00000468878 ZNF316A6NFI3 1004 aaPredicted RBP25.8■■□□□ 1.72
TRIM46-207ENST00000468878 CENPBP07199 599 aaPredicted RBP25.75■■□□□ 1.71
TRIM46-207ENST00000468878 FAM50AQ14320 339 aaKnown RBP25.71■■□□□ 1.71
TRIM46-207ENST00000468878 GTF3C3Q9Y5Q9 886 aa25.7■■□□□ 1.71
TRIM46-207ENST00000468878 VPS8Q8N3P4 1428 aa25.66■■□□□ 1.7
TRIM46-207ENST00000468878 ACIN1Q9UKV3 1341 aaKnown RBP25.64■■□□□ 1.7
TRIM46-207ENST00000468878 MIER1Q8N108 512 aa25.63■■□□□ 1.69
TRIM46-207ENST00000468878 ARID3CA6NKF2 412 aa25.6■■□□□ 1.69
TRIM46-207ENST00000468878 KIF27Q86VH2 1401 aa25.57■■□□□ 1.68
TRIM46-207ENST00000468878 CUX2O14529 1486 aa25.52■■□□□ 1.68
TRIM46-207ENST00000468878 PEG3Q9GZU2 1588 aa25.49■■□□□ 1.67
TRIM46-207ENST00000468878 MYT1Q01538 1121 aa25.47■■□□□ 1.67
TRIM46-207ENST00000468878 KIF21BO75037 1637 aa25.44■■□□□ 1.66
TRIM46-207ENST00000468878 NCAPD3P42695 1498 aa25.41■■□□□ 1.66
TRIM46-207ENST00000468878 CUX1P39880 1505 aa25.41■■□□□ 1.66
TRIM46-207ENST00000468878 DNAJC5BQ9UF47 199 aa25.4■■□□□ 1.66
TRIM46-207ENST00000468878 HIRIP3Q9BW71 556 aaPredicted RBP25.4■■□□□ 1.66
TRIM46-207ENST00000468878 CARMIL1Q5VZK9 1371 aa25.36■■□□□ 1.65
TRIM46-207ENST00000468878 TOP2BQ02880 1626 aa25.35■■□□□ 1.65
TRIM46-207ENST00000468878 ARAP1Q96P48 1450 aa25.35■■□□□ 1.65
TRIM46-207ENST00000468878 CADPSQ9ULU8 1353 aa25.32■■□□□ 1.64
TRIM46-207ENST00000468878 SIN3AQ96ST3 1273 aa25.28■■□□□ 1.64
TRIM46-207ENST00000468878 IGF1RP08069 1367 aa25.27■■□□□ 1.64
TRIM46-207ENST00000468878 CFTRP13569 1480 aa25.25■■□□□ 1.63
TRIM46-207ENST00000468878 PRXQ9BXM0 1461 aa25.25■■□□□ 1.63
TRIM46-207ENST00000468878 RAD54L2Q9Y4B4 1467 aa25.22■■□□□ 1.63
TRIM46-207ENST00000468878 TDRD9Q8NDG6 1382 aaKnown RBP25.21■■□□□ 1.63
TRIM46-207ENST00000468878 NESP48681 1621 aa25.21■■□□□ 1.63
TRIM46-207ENST00000468878 CCNB3Q8WWL7 1395 aa25.21■■□□□ 1.63
TRIM46-207ENST00000468878 FGD5Q6ZNL6 1462 aa25.19■■□□□ 1.62
TRIM46-207ENST00000468878 DHX57Q6P158 1386 aaKnown RBP25.16■■□□□ 1.62
TRIM46-207ENST00000468878 CHIC2Q9UKJ5 165 aa25.16■■□□□ 1.62
TRIM46-207ENST00000468878 ARHGAP35Q9NRY4 1499 aa25.14■■□□□ 1.62
TRIM46-207ENST00000468878 FHOD3Q2V2M9 1422 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms