RNA–Protein interactions for RNA: ENST00000467387.1

SPTA1-204, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 5

Gene SPTA1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-204ENST00000467387 TOPBP1Q92547 1522 aa13.89□□□□□ -0.19
SPTA1-204ENST00000467387 CCDC88BA6NC98 1476 aa13.88□□□□□ -0.19
SPTA1-204ENST00000467387 POLA2Q14181 598 aa13.88□□□□□ -0.19
SPTA1-204ENST00000467387 EIF4G3O43432 1585 aaKnown RBP13.88□□□□□ -0.19
SPTA1-204ENST00000467387 ABCC8Q09428 1581 aa13.83□□□□□ -0.19
SPTA1-204ENST00000467387 DNMBPQ6XZF7 1577 aa13.83□□□□□ -0.19
SPTA1-204ENST00000467387 FBLN2P98095 1184 aa13.79□□□□□ -0.2
SPTA1-204ENST00000467387 CHD1O14646 1710 aa13.78□□□□□ -0.2
SPTA1-204ENST00000467387 CYB5RLQ6IPT4 315 aa13.78□□□□□ -0.2
SPTA1-204ENST00000467387 AQRO60306 1485 aaKnown RBP eCLIP13.77□□□□□ -0.218e-8■■■■■ 34.5
SPTA1-204ENST00000467387 TARBP1Q13395 1621 aaKnown RBP13.75□□□□□ -0.21
SPTA1-204ENST00000467387 POLA1P09884 1462 aaPredicted RBP13.73□□□□□ -0.21
SPTA1-204ENST00000467387 ARAP1Q96P48 1450 aa13.73□□□□□ -0.21
SPTA1-204ENST00000467387 RAD54L2Q9Y4B4 1467 aa13.68□□□□□ -0.22
SPTA1-204ENST00000467387 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
SPTA1-204ENST00000467387 ZBTB12Q9Y330 459 aaPredicted RBP13.67□□□□□ -0.22
SPTA1-204ENST00000467387 TDRD9Q8NDG6 1382 aaKnown RBP13.67□□□□□ -0.22
SPTA1-204ENST00000467387 SOGA1O94964 1423 aa13.65□□□□□ -0.22
SPTA1-204ENST00000467387 FGD5Q6ZNL6 1462 aa13.64□□□□□ -0.23
SPTA1-204ENST00000467387 SYNJ1O43426 1573 aa13.63□□□□□ -0.23
SPTA1-204ENST00000467387 MKRN4PQ13434 485 aaPredicted RBP13.63□□□□□ -0.23
SPTA1-204ENST00000467387 WDR97A6NE52 1622 aa13.62□□□□□ -0.23
SPTA1-204ENST00000467387 CHMP7Q8WUX9 453 aaPredicted RBP13.62□□□□□ -0.23
SPTA1-204ENST00000467387 MAGI1Q96QZ7 1491 aaPredicted RBP13.61□□□□□ -0.23
SPTA1-204ENST00000467387 CLASP1Q7Z460 1538 aa13.6□□□□□ -0.23
SPTA1-204ENST00000467387 GRIN2BQ13224 1484 aa13.59□□□□□ -0.23
SPTA1-204ENST00000467387 CUX1P39880 1505 aa13.58□□□□□ -0.24
SPTA1-204ENST00000467387 SYNJ2O15056 1496 aa13.56□□□□□ -0.24
SPTA1-204ENST00000467387 PBRM1Q86U86 1689 aa13.53□□□□□ -0.24
SPTA1-204ENST00000467387 GAPVD1Q14C86 1478 aa13.51□□□□□ -0.25
SPTA1-204ENST00000467387 ABCA5Q8WWZ7 1642 aa13.45□□□□□ -0.26
SPTA1-204ENST00000467387 ABCA10Q8WWZ4 1543 aa13.44□□□□□ -0.26
SPTA1-204ENST00000467387 GRIN2AQ12879 1464 aa13.42□□□□□ -0.26
SPTA1-204ENST00000467387 ADAMTS12P58397 1594 aa13.41□□□□□ -0.26
SPTA1-204ENST00000467387 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
SPTA1-204ENST00000467387 ERCC6L2Q5T890 1561 aa13.37□□□□□ -0.27
SPTA1-204ENST00000467387 SUPT5HO00267 1087 aaKnown RBP13.37□□□□□ -0.27
SPTA1-204ENST00000467387 CEP170Q5SW79 1584 aa13.37□□□□□ -0.27
SPTA1-204ENST00000467387 NUP160Q12769 1436 aa13.34□□□□□ -0.27
SPTA1-204ENST00000467387 FHAD1B1AJZ9 1412 aa13.32□□□□□ -0.28
SPTA1-204ENST00000467387 TOP2BQ02880 1626 aa13.31□□□□□ -0.28
SPTA1-204ENST00000467387 SPDYE2BA6NHP3 402 aa13.3□□□□□ -0.28
SPTA1-204ENST00000467387 SPDYE6P0CI01 402 aa13.3□□□□□ -0.28
SPTA1-204ENST00000467387 SPDYE2Q495Y8 402 aa13.3□□□□□ -0.28
SPTA1-204ENST00000467387 SHROOM2Q13796 1616 aa13.3□□□□□ -0.28
SPTA1-204ENST00000467387 BIVM-ERCC5R4GMW8 1640 aa13.3□□□□□ -0.28
SPTA1-204ENST00000467387 ERICH3Q5RHP9 1530 aa13.29□□□□□ -0.28
SPTA1-204ENST00000467387 SPDYE4A6NLX3 237 aa13.28□□□□□ -0.28
SPTA1-204ENST00000467387 FKBP8Q14318 412 aa13.28□□□□□ -0.28
SPTA1-204ENST00000467387 RBM42Q9BTD8 480 aaKnown RBP13.28□□□□□ -0.28
SPTA1-204ENST00000467387 PRG4Q92954 1404 aaPredicted RBP13.26□□□□□ -0.29
SPTA1-204ENST00000467387 SSUH2Q9Y2M2 353 aa13.23□□□□□ -0.29
SPTA1-204ENST00000467387 RUSC2Q8N2Y8 1516 aa13.22□□□□□ -0.29
SPTA1-204ENST00000467387 ZNF692Q9BU19 519 aaPredicted RBP13.21□□□□□ -0.29
SPTA1-204ENST00000467387 KIF13AQ9H1H9 1805 aa13.2□□□□□ -0.3
SPTA1-204ENST00000467387 NPM1P06748 294 aaKnown RBP eCLIP13.2□□□□□ -0.3
SPTA1-204ENST00000467387 JPH4Q96JJ6 628 aa13.18□□□□□ -0.3
SPTA1-204ENST00000467387 FAM69CQ0P6D2 419 aa13.17□□□□□ -0.3
SPTA1-204ENST00000467387 ABCC10Q5T3U5 1492 aa13.15□□□□□ -0.3
SPTA1-204ENST00000467387 MAPKBP1O60336 1514 aa13.14□□□□□ -0.31
SPTA1-204ENST00000467387 PROM2Q8N271 834 aa13.14□□□□□ -0.31
SPTA1-204ENST00000467387 DIP2BQ9P265 1576 aa13.13□□□□□ -0.31
SPTA1-204ENST00000467387 AKT1S1Q96B36 256 aa13.13□□□□□ -0.31
SPTA1-204ENST00000467387 ADCY10Q96PN6 1610 aa13.13□□□□□ -0.31
SPTA1-204ENST00000467387 KDM6BO15054 1643 aa13.1□□□□□ -0.31
SPTA1-204ENST00000467387 TTBK1Q5TCY1 1321 aaPredicted RBP13.09□□□□□ -0.31
SPTA1-204ENST00000467387 CUL7Q14999 1698 aa13.08□□□□□ -0.31
SPTA1-204ENST00000467387 KIAA0586Q9BVV6 1533 aa13.08□□□□□ -0.31
SPTA1-204ENST00000467387 KIF27Q86VH2 1401 aa13.08□□□□□ -0.32
SPTA1-204ENST00000467387 TSPOAP1O95153 1857 aa13.06□□□□□ -0.32
SPTA1-204ENST00000467387 PTPRGP23470 1445 aa13.03□□□□□ -0.32
SPTA1-204ENST00000467387 CARMIL2Q6F5E8 1435 aa13.02□□□□□ -0.33
SPTA1-204ENST00000467387 IGF1RP08069 1367 aa13.01□□□□□ -0.33
SPTA1-204ENST00000467387 REM2Q8IYK8 340 aaPredicted RBP13□□□□□ -0.33
SPTA1-204ENST00000467387 ABCC2Q92887 1545 aa12.98□□□□□ -0.33
SPTA1-204ENST00000467387 TNIKQ9UKE5 1360 aa12.98□□□□□ -0.33
SPTA1-204ENST00000467387 IQGAP2Q13576 1575 aa12.98□□□□□ -0.33
SPTA1-204ENST00000467387 CARMIL1Q5VZK9 1371 aa12.97□□□□□ -0.33
SPTA1-204ENST00000467387 ASXL2Q76L83 1435 aa12.96□□□□□ -0.33
SPTA1-204ENST00000467387 KDM4FA0A1W2PPD8 638 aa12.96□□□□□ -0.33
SPTA1-204ENST00000467387 PLB1Q6P1J6 1458 aa12.96□□□□□ -0.34
SPTA1-204ENST00000467387 UACAQ9BZF9 1416 aa12.91□□□□□ -0.34
SPTA1-204ENST00000467387 UHRF1BP1LA0JNW5 1464 aa12.91□□□□□ -0.34
SPTA1-204ENST00000467387 ADGRL1O94910 1474 aa12.91□□□□□ -0.34
SPTA1-204ENST00000467387 GLI2P10070 1586 aa12.9□□□□□ -0.34
SPTA1-204ENST00000467387 SPDYE1Q8NFV5 336 aaPredicted RBP12.89□□□□□ -0.35
SPTA1-204ENST00000467387 TEX14Q8IWB6 1497 aa12.89□□□□□ -0.35
SPTA1-204ENST00000467387 PPRC1Q5VV67 1664 aaKnown RBP12.89□□□□□ -0.35
SPTA1-204ENST00000467387 DISP1Q96F81 1524 aa12.88□□□□□ -0.35
SPTA1-204ENST00000467387 PITPNM1O00562 1244 aa12.87□□□□□ -0.35
SPTA1-204ENST00000467387 EPRSP07814 1512 aaKnown RBP12.87□□□□□ -0.35
SPTA1-204ENST00000467387 KIAA0556O60303 1618 aa12.85□□□□□ -0.35
SPTA1-204ENST00000467387 ZCCHC11Q5TAX3 1644 aaKnown RBP12.85□□□□□ -0.35
SPTA1-204ENST00000467387 RAPGEF2Q9Y4G8 1499 aa12.85□□□□□ -0.35
SPTA1-204ENST00000467387 MAP3K4Q9Y6R4 1608 aa12.84□□□□□ -0.35
SPTA1-204ENST00000467387 KDM5BQ9UGL1 1544 aa12.84□□□□□ -0.35
SPTA1-204ENST00000467387 UGGT2Q9NYU1 1516 aa12.83□□□□□ -0.35
SPTA1-204ENST00000467387 STAG3Q9UJ98 1225 aa12.83□□□□□ -0.36
SPTA1-204ENST00000467387 ILDR1Q86SU0 546 aaPredicted RBP12.82□□□□□ -0.36
SPTA1-204ENST00000467387 WDR7Q9Y4E6 1490 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms