RNA–Protein interactions for RNA: ENST00000467331.5

APTX-214, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-214ENST00000467331 IGF1RP08069 1367 aa14.11□□□□□ -0.15
APTX-214ENST00000467331 ADRA2BP18089 450 aa14.1□□□□□ -0.15
APTX-214ENST00000467331 RANGAP1P46060 587 aaPredicted RBP14.1□□□□□ -0.15
APTX-214ENST00000467331 LRRC9Q6ZRR7 1453 aa14.09□□□□□ -0.15
APTX-214ENST00000467331 FHAD1B1AJZ9 1412 aa14.08□□□□□ -0.16
APTX-214ENST00000467331 RAB3GAP2Q9H2M9 1393 aa14.06□□□□□ -0.16
APTX-214ENST00000467331 SETD5Q9C0A6 1442 aa14.05□□□□□ -0.16
APTX-214ENST00000467331 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.05□□□□□ -0.16
APTX-214ENST00000467331 CADPSQ9ULU8 1353 aa14.05□□□□□ -0.16
APTX-214ENST00000467331 CARMIL1Q5VZK9 1371 aa14.04□□□□□ -0.16
APTX-214ENST00000467331 FGD5Q6ZNL6 1462 aa14.04□□□□□ -0.16
APTX-214ENST00000467331 EFCAB5A4FU69 1503 aa14.04□□□□□ -0.16
APTX-214ENST00000467331 AQRO60306 1485 aaKnown RBP eCLIP14.03□□□□□ -0.16
APTX-214ENST00000467331 TIMELESSQ9UNS1 1208 aa14.03□□□□□ -0.16
APTX-214ENST00000467331 PCF11O94913 1555 aaKnown RBP14.01□□□□□ -0.17
APTX-214ENST00000467331 FYCO1Q9BQS8 1478 aa14□□□□□ -0.17
APTX-214ENST00000467331 CC2D2AQ9P2K1 1620 aa14□□□□□ -0.17
APTX-214ENST00000467331 SUPT16HQ9Y5B9 1047 aaKnown RBP13.99□□□□□ -0.17
APTX-214ENST00000467331 CUL7Q14999 1698 aa13.98□□□□□ -0.17
APTX-214ENST00000467331 PHLDB1Q86UU1 1377 aa13.98□□□□□ -0.17
APTX-214ENST00000467331 ABCA10Q8WWZ4 1543 aa13.97□□□□□ -0.17
APTX-214ENST00000467331 DNMBPQ6XZF7 1577 aa13.96□□□□□ -0.17
APTX-214ENST00000467331 CTTNBP2Q8WZ74 1663 aa13.95□□□□□ -0.18
APTX-214ENST00000467331 CASKIN1Q8WXD9 1431 aa13.95□□□□□ -0.18
APTX-214ENST00000467331 PIAS4Q8N2W9 510 aaPredicted RBP13.94□□□□□ -0.18
APTX-214ENST00000467331 WDR97A6NE52 1622 aa13.94□□□□□ -0.18
APTX-214ENST00000467331 FANCD2Q9BXW9 1451 aa13.9□□□□□ -0.18
APTX-214ENST00000467331 THOC2Q8NI27 1593 aaKnown RBP13.89□□□□□ -0.19
APTX-214ENST00000467331 FMN1Q68DA7 1419 aa13.87□□□□□ -0.19
APTX-214ENST00000467331 TOPBP1Q92547 1522 aa13.87□□□□□ -0.19
APTX-214ENST00000467331 SNAPC4Q5SXM2 1469 aa13.86□□□□□ -0.19
APTX-214ENST00000467331 ITGAEP38570 1179 aa13.86□□□□□ -0.19
APTX-214ENST00000467331 SAMD9Q5K651 1589 aa13.86□□□□□ -0.19
APTX-214ENST00000467331 PPP1R15AO75807 674 aaPredicted RBP13.85□□□□□ -0.19
APTX-214ENST00000467331 POLA1P09884 1462 aaPredicted RBP13.85□□□□□ -0.19
APTX-214ENST00000467331 CCER2I3L3R5 266 aa13.85□□□□□ -0.19
APTX-214ENST00000467331 KIF21AQ7Z4S6 1674 aa13.85□□□□□ -0.19
APTX-214ENST00000467331 FHOD3Q2V2M9 1422 aa13.85□□□□□ -0.19
APTX-214ENST00000467331 FGD6Q6ZV73 1430 aa13.85□□□□□ -0.19
APTX-214ENST00000467331 HFM1A2PYH4 1435 aa13.83□□□□□ -0.19
APTX-214ENST00000467331 UACAQ9BZF9 1416 aa13.81□□□□□ -0.2
APTX-214ENST00000467331 PTPN23Q9H3S7 1636 aa13.81□□□□□ -0.2
APTX-214ENST00000467331 FAM50AQ14320 339 aaKnown RBP13.81□□□□□ -0.2
APTX-214ENST00000467331 TSHZ2Q9NRE2 1034 aa13.81□□□□□ -0.2
APTX-214ENST00000467331 ABCA5Q8WWZ7 1642 aa13.8□□□□□ -0.2
APTX-214ENST00000467331 CCDC18Q5T9S5 1454 aa13.8□□□□□ -0.2
APTX-214ENST00000467331 RAD54L2Q9Y4B4 1467 aa13.79□□□□□ -0.2
APTX-214ENST00000467331 SIN3AQ96ST3 1273 aa13.78□□□□□ -0.2
APTX-214ENST00000467331 EHBP1L1Q8N3D4 1523 aa13.78□□□□□ -0.2
APTX-214ENST00000467331 GRIN2BQ13224 1484 aa13.78□□□□□ -0.2
APTX-214ENST00000467331 LRRIQ1Q96JM4 1722 aa13.77□□□□□ -0.2
APTX-214ENST00000467331 ARHGEF11O15085 1522 aa13.77□□□□□ -0.21
APTX-214ENST00000467331 SUPT6HQ7KZ85 1726 aaKnown RBP13.77□□□□□ -0.21
APTX-214ENST00000467331 LAMC3Q9Y6N6 1575 aa13.77□□□□□ -0.21
APTX-214ENST00000467331 MYOM3Q5VTT5 1437 aa13.75□□□□□ -0.21
APTX-214ENST00000467331 KCNH8Q96L42 1107 aa13.75□□□□□ -0.21
APTX-214ENST00000467331 DDX10Q13206 875 aaKnown RBP13.75□□□□□ -0.21
APTX-214ENST00000467331 AKNAQ7Z591 1439 aa13.74□□□□□ -0.21
APTX-214ENST00000467331 GCC2Q8IWJ2 1684 aa13.74□□□□□ -0.21
APTX-214ENST00000467331 KDM5BQ9UGL1 1544 aa13.74□□□□□ -0.21
APTX-214ENST00000467331 NAIPQ13075 1403 aa13.73□□□□□ -0.21
APTX-214ENST00000467331 TONSLQ96HA7 1378 aa13.73□□□□□ -0.21
APTX-214ENST00000467331 UGGT2Q9NYU1 1516 aa13.73□□□□□ -0.21
APTX-214ENST00000467331 TCOF1Q13428 1488 aaKnown RBP13.73□□□□□ -0.21
APTX-214ENST00000467331 NCOA2Q15596 1464 aa13.73□□□□□ -0.21
APTX-214ENST00000467331 HECW1Q76N89 1606 aa13.72□□□□□ -0.21
APTX-214ENST00000467331 PTPRKQ15262 1439 aa13.72□□□□□ -0.21
APTX-214ENST00000467331 MTUS2Q5JR59 1369 aa13.72□□□□□ -0.21
APTX-214ENST00000467331 ANP32CO43423 234 aa13.71□□□□□ -0.21
APTX-214ENST00000467331 MSH5O43196 834 aa13.7□□□□□ -0.22
APTX-214ENST00000467331 URB2Q14146 1524 aaKnown RBP13.7□□□□□ -0.22
APTX-214ENST00000467331 P3H3Q8IVL6 736 aa13.69□□□□□ -0.22
APTX-214ENST00000467331 GAPVD1Q14C86 1478 aa13.67□□□□□ -0.22
APTX-214ENST00000467331 NEFLP07196 543 aa13.66□□□□□ -0.22
APTX-214ENST00000467331 FKBP8Q14318 412 aa13.65□□□□□ -0.22
APTX-214ENST00000467331 ANP32EQ9BTT0 268 aa13.65□□□□□ -0.22
APTX-214ENST00000467331 NESP48681 1621 aa13.65□□□□□ -0.22
APTX-214ENST00000467331 ATP1B4Q9UN42 357 aaPredicted RBP13.64□□□□□ -0.23
APTX-214ENST00000467331 MIA2Q96PC5 1412 aa13.63□□□□□ -0.23
APTX-214ENST00000467331 MAGI3Q5TCQ9 1506 aa13.62□□□□□ -0.23
APTX-214ENST00000467331 TARBP1Q13395 1621 aaKnown RBP13.61□□□□□ -0.23
APTX-214ENST00000467331 DENND4BO75064 1496 aaPredicted RBP13.6□□□□□ -0.23
APTX-214ENST00000467331 PDS5BQ9NTI5 1447 aa13.59□□□□□ -0.23
APTX-214ENST00000467331 PBRM1Q86U86 1689 aa13.58□□□□□ -0.24
APTX-214ENST00000467331 IQGAP2Q13576 1575 aa13.57□□□□□ -0.24
APTX-214ENST00000467331 ERICH6BQ5W0A0 696 aa13.57□□□□□ -0.24
APTX-214ENST00000467331 WDR62O43379 1518 aa13.56□□□□□ -0.24
APTX-214ENST00000467331 EPRSP07814 1512 aaKnown RBP13.56□□□□□ -0.24
APTX-214ENST00000467331 POLR1AO95602 1720 aaPredicted RBP13.56□□□□□ -0.24
APTX-214ENST00000467331 TDRD9Q8NDG6 1382 aaKnown RBP13.55□□□□□ -0.24
APTX-214ENST00000467331 ADAMTS12P58397 1594 aa13.55□□□□□ -0.24
APTX-214ENST00000467331 ROCK1Q13464 1354 aa13.55□□□□□ -0.24
APTX-214ENST00000467331 CNTLNQ9NXG0 1405 aa13.54□□□□□ -0.24
APTX-214ENST00000467331 BCANQ96GW7 911 aa13.54□□□□□ -0.24
APTX-214ENST00000467331 HIRIP3Q9BW71 556 aaPredicted RBP13.54□□□□□ -0.24
APTX-214ENST00000467331 TRIM52Q96A61 297 aa13.53□□□□□ -0.24
APTX-214ENST00000467331 KDM6BO15054 1643 aa13.53□□□□□ -0.24
APTX-214ENST00000467331 NCOA1Q15788 1441 aa13.52□□□□□ -0.24
APTX-214ENST00000467331 DNMT1P26358 1616 aaKnown RBP13.52□□□□□ -0.25
APTX-214ENST00000467331 RBM19Q9Y4C8 960 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms