RNA–Protein interactions for RNA: ENST00000466832.5

TRA2B-209, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-209ENST00000466832 PEG3Q9GZU2 1588 aa9.64□□□□□ -0.87
TRA2B-209ENST00000466832 FANCD2Q9BXW9 1451 aa9.64□□□□□ -0.87
TRA2B-209ENST00000466832 KIF13AQ9H1H9 1805 aa9.62□□□□□ -0.87
TRA2B-209ENST00000466832 SPATA31D1Q6ZQQ2 1576 aa9.61□□□□□ -0.87
TRA2B-209ENST00000466832 ZNF608Q9ULD9 1512 aaPredicted RBP9.61□□□□□ -0.87
TRA2B-209ENST00000466832 CLASP1Q7Z460 1538 aa9.6□□□□□ -0.87
TRA2B-209ENST00000466832 URB2Q14146 1524 aaKnown RBP9.6□□□□□ -0.87
TRA2B-209ENST00000466832 ZNF219Q9P2Y4 722 aaPredicted RBP9.59□□□□□ -0.87
TRA2B-209ENST00000466832 ADGRL1O94910 1474 aa9.59□□□□□ -0.87
TRA2B-209ENST00000466832 KDM6BO15054 1643 aa9.58□□□□□ -0.88
TRA2B-209ENST00000466832 PLCB2Q00722 1185 aa9.57□□□□□ -0.88
TRA2B-209ENST00000466832 EIF4G3O43432 1585 aaKnown RBP9.57□□□□□ -0.88
TRA2B-209ENST00000466832 GAPVD1Q14C86 1478 aa9.56□□□□□ -0.88
TRA2B-209ENST00000466832 APLP2Q06481 763 aa9.54□□□□□ -0.88
TRA2B-209ENST00000466832 SPDYE4A6NLX3 237 aa9.53□□□□□ -0.88
TRA2B-209ENST00000466832 SYNJ1O43426 1573 aa9.53□□□□□ -0.88
TRA2B-209ENST00000466832 MROH2BQ7Z745 1585 aa9.53□□□□□ -0.88
TRA2B-209ENST00000466832 FBLN2P98095 1184 aa9.52□□□□□ -0.89
TRA2B-209ENST00000466832 PROM2Q8N271 834 aa9.5□□□□□ -0.89
TRA2B-209ENST00000466832 TOP2AP11388 1531 aaKnown RBP9.5□□□□□ -0.89
TRA2B-209ENST00000466832 WIZO95785 1651 aa9.49□□□□□ -0.89
TRA2B-209ENST00000466832 VASPP50552 380 aaPredicted RBP9.48□□□□□ -0.89
TRA2B-209ENST00000466832 ABCC10Q5T3U5 1492 aa9.44□□□□□ -0.9
TRA2B-209ENST00000466832 CFTRP13569 1480 aa9.44□□□□□ -0.9
TRA2B-209ENST00000466832 MKRN4PQ13434 485 aaPredicted RBP9.43□□□□□ -0.9
TRA2B-209ENST00000466832 TOP2BQ02880 1626 aa9.42□□□□□ -0.9
TRA2B-209ENST00000466832 HAP1P54257 671 aaPredicted RBP9.42□□□□□ -0.9
TRA2B-209ENST00000466832 FAM69CQ0P6D2 419 aa9.41□□□□□ -0.9
TRA2B-209ENST00000466832 AQRO60306 1485 aaKnown RBP eCLIP9.39□□□□□ -0.914e-7■■■□□ 19.1
TRA2B-209ENST00000466832 CERKQ8TCT0 537 aa9.39□□□□□ -0.91
TRA2B-209ENST00000466832 IFNLR1Q8IU57 520 aaPredicted RBP9.38□□□□□ -0.91
TRA2B-209ENST00000466832 DIP2BQ9P265 1576 aa9.37□□□□□ -0.91
TRA2B-209ENST00000466832 BCANQ96GW7 911 aa9.36□□□□□ -0.91
TRA2B-209ENST00000466832 ABCC8Q09428 1581 aa9.36□□□□□ -0.91
TRA2B-209ENST00000466832 CHMP7Q8WUX9 453 aaPredicted RBP9.35□□□□□ -0.91
TRA2B-209ENST00000466832 MAPKBP1O60336 1514 aa9.35□□□□□ -0.91
TRA2B-209ENST00000466832 TARBP1Q13395 1621 aaKnown RBP9.34□□□□□ -0.91
TRA2B-209ENST00000466832 WDR97A6NE52 1622 aa9.33□□□□□ -0.92
TRA2B-209ENST00000466832 TOPBP1Q92547 1522 aa9.33□□□□□ -0.92
TRA2B-209ENST00000466832 PKD2Q13563 968 aa9.33□□□□□ -0.92
TRA2B-209ENST00000466832 MAGI1Q96QZ7 1491 aaPredicted RBP9.33□□□□□ -0.92
TRA2B-209ENST00000466832 VSIG10Q8N0Z9 540 aa9.32□□□□□ -0.92
TRA2B-209ENST00000466832 PRDM2Q13029 1718 aa9.32□□□□□ -0.92
TRA2B-209ENST00000466832 SNAPC4Q5SXM2 1469 aa9.3□□□□□ -0.92
TRA2B-209ENST00000466832 TSPOAP1O95153 1857 aa9.29□□□□□ -0.92
TRA2B-209ENST00000466832 CCDC88BA6NC98 1476 aa9.29□□□□□ -0.92
TRA2B-209ENST00000466832 NPM1P06748 294 aaKnown RBP eCLIP9.26□□□□□ -0.93
TRA2B-209ENST00000466832 EEA1Q15075 1411 aa9.26□□□□□ -0.93
TRA2B-209ENST00000466832 DNMBPQ6XZF7 1577 aa9.24□□□□□ -0.93
TRA2B-209ENST00000466832 PCF11O94913 1555 aaKnown RBP9.24□□□□□ -0.93
TRA2B-209ENST00000466832 TAOK2Q9UL54 1235 aa9.24□□□□□ -0.93
TRA2B-209ENST00000466832 POLA2Q14181 598 aa9.22□□□□□ -0.93
TRA2B-209ENST00000466832 PRKCSHP14314 528 aaPredicted RBP9.21□□□□□ -0.93
TRA2B-209ENST00000466832 BBXQ8WY36 941 aaPredicted RBP9.21□□□□□ -0.93
TRA2B-209ENST00000466832 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.21□□□□□ -0.93
TRA2B-209ENST00000466832 CEP170Q5SW79 1584 aa9.21□□□□□ -0.93
TRA2B-209ENST00000466832 GRIN2BQ13224 1484 aa9.19□□□□□ -0.94
TRA2B-209ENST00000466832 SPOCK2Q92563 424 aa9.19□□□□□ -0.94
TRA2B-209ENST00000466832 SHROOM2Q13796 1616 aa9.18□□□□□ -0.94
TRA2B-209ENST00000466832 ZBTB12Q9Y330 459 aaPredicted RBP9.17□□□□□ -0.94
TRA2B-209ENST00000466832 SPINK5Q9NQ38 1064 aaPredicted RBP9.17□□□□□ -0.94
TRA2B-209ENST00000466832 POLA1P09884 1462 aaPredicted RBP9.15□□□□□ -0.94
TRA2B-209ENST00000466832 ECM2O94769 699 aaPredicted RBP9.15□□□□□ -0.94
TRA2B-209ENST00000466832 TDRD9Q8NDG6 1382 aaKnown RBP9.15□□□□□ -0.95
TRA2B-209ENST00000466832 KLHL34Q8N239 644 aa9.14□□□□□ -0.95
TRA2B-209ENST00000466832 PPRC1Q5VV67 1664 aaKnown RBP9.14□□□□□ -0.95
TRA2B-209ENST00000466832 HRCP23327 699 aa9.14□□□□□ -0.95
TRA2B-209ENST00000466832 BIVM-ERCC5R4GMW8 1640 aa9.14□□□□□ -0.95
TRA2B-209ENST00000466832 PTPRMP28827 1452 aa9.14□□□□□ -0.95
TRA2B-209ENST00000466832 KDM2AQ9Y2K7 1162 aa9.13□□□□□ -0.95
TRA2B-209ENST00000466832 KIF21BO75037 1637 aa9.13□□□□□ -0.95
TRA2B-209ENST00000466832 GLI2P10070 1586 aa9.12□□□□□ -0.95
TRA2B-209ENST00000466832 PAXIP1Q6ZW49 1069 aaPredicted RBP9.12□□□□□ -0.95
TRA2B-209ENST00000466832 IQSEC2Q5JU85 1478 aa9.11□□□□□ -0.95
TRA2B-209ENST00000466832 WRNQ14191 1432 aaPredicted RBP eCLIP9.11□□□□□ -0.95
TRA2B-209ENST00000466832 LOC105371045A0A1W2PR82 267 aa9.11□□□□□ -0.95
TRA2B-209ENST00000466832 TRIM26Q12899 539 aaPredicted RBP9.11□□□□□ -0.95
TRA2B-209ENST00000466832 CAPN15O75808 1086 aa9.11□□□□□ -0.95
TRA2B-209ENST00000466832 SOGA1O94964 1423 aa9.1□□□□□ -0.95
TRA2B-209ENST00000466832 STAG3Q9UJ98 1225 aa9.1□□□□□ -0.95
TRA2B-209ENST00000466832 TEX14Q8IWB6 1497 aa9.09□□□□□ -0.95
TRA2B-209ENST00000466832 COL17A1Q9UMD9 1497 aaPredicted RBP9.09□□□□□ -0.95
TRA2B-209ENST00000466832 TPRNQ4KMQ1 711 aa9.08□□□□□ -0.96
TRA2B-209ENST00000466832 CFAP44Q96MT7 982 aa9.08□□□□□ -0.96
TRA2B-209ENST00000466832 ADCY10Q96PN6 1610 aa9.08□□□□□ -0.96
TRA2B-209ENST00000466832 NUP160Q12769 1436 aa9.07□□□□□ -0.96
TRA2B-209ENST00000466832 TNIKQ9UKE5 1360 aa9.07□□□□□ -0.96
TRA2B-209ENST00000466832 RAD54L2Q9Y4B4 1467 aa9.07□□□□□ -0.96
TRA2B-209ENST00000466832 ADAMTSL3P82987 1691 aa9.07□□□□□ -0.96
TRA2B-209ENST00000466832 MED1Q15648 1581 aaPredicted RBP9.06□□□□□ -0.96
TRA2B-209ENST00000466832 PBRM1Q86U86 1689 aa9.06□□□□□ -0.96
TRA2B-209ENST00000466832 GOLGA3Q08378 1498 aa9.06□□□□□ -0.96
TRA2B-209ENST00000466832 GRIN2AQ12879 1464 aa9.04□□□□□ -0.96
TRA2B-209ENST00000466832 RNF39Q9H2S5 420 aa9.04□□□□□ -0.96
TRA2B-209ENST00000466832 RGL2O15211 777 aa9.04□□□□□ -0.96
TRA2B-209ENST00000466832 SPRYD3Q8NCJ5 442 aa9.03□□□□□ -0.96
TRA2B-209ENST00000466832 PRG4Q92954 1404 aaPredicted RBP9.03□□□□□ -0.96
TRA2B-209ENST00000466832 KIAA0586Q9BVV6 1533 aa9.02□□□□□ -0.96
TRA2B-209ENST00000466832 PLCD3Q8N3E9 789 aa9.02□□□□□ -0.97
TRA2B-209ENST00000466832 ERICH3Q5RHP9 1530 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms