RNA–Protein interactions for RNA: ENST00000466525.1

GAPDH-206, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-206ENST00000466525 GTF3C3Q9Y5Q9 886 aa22.46■■□□□ 1.19
GAPDH-206ENST00000466525 AEBP2Q6ZN18 517 aaPredicted RBP22.45■■□□□ 1.19
GAPDH-206ENST00000466525 CLIP1P30622 1438 aa22.45■■□□□ 1.18
GAPDH-206ENST00000466525 CHMP7Q8WUX9 453 aaPredicted RBP22.43■■□□□ 1.18
GAPDH-206ENST00000466525 TDRD9Q8NDG6 1382 aaKnown RBP22.4■■□□□ 1.18
GAPDH-206ENST00000466525 MAGI1Q96QZ7 1491 aaPredicted RBP22.39■■□□□ 1.17
GAPDH-206ENST00000466525 RAD54L2Q9Y4B4 1467 aa22.39■■□□□ 1.17
GAPDH-206ENST00000466525 CLASP1Q7Z460 1538 aa22.38■■□□□ 1.17
GAPDH-206ENST00000466525 SNAPC4Q5SXM2 1469 aa22.37■■□□□ 1.17
GAPDH-206ENST00000466525 TOP2BQ02880 1626 aa22.36■■□□□ 1.17
GAPDH-206ENST00000466525 CLSPNQ9HAW4 1339 aa22.36■■□□□ 1.17
GAPDH-206ENST00000466525 BIVM-ERCC5R4GMW8 1640 aa22.34■■□□□ 1.17
GAPDH-206ENST00000466525 ERICH3Q5RHP9 1530 aa22.34■■□□□ 1.17
GAPDH-206ENST00000466525 GRIN2BQ13224 1484 aa22.33■■□□□ 1.17
GAPDH-206ENST00000466525 SYNJ2O15056 1496 aa22.3■■□□□ 1.16
GAPDH-206ENST00000466525 FGD5Q6ZNL6 1462 aa22.29■■□□□ 1.16
GAPDH-206ENST00000466525 RAPGEF2Q9Y4G8 1499 aa22.27■■□□□ 1.16
GAPDH-206ENST00000466525 TTBK1Q5TCY1 1321 aaPredicted RBP22.27■■□□□ 1.16
GAPDH-206ENST00000466525 GAPVD1Q14C86 1478 aa22.21■■□□□ 1.15
GAPDH-206ENST00000466525 APLP2Q06481 763 aa22.2■■□□□ 1.14
GAPDH-206ENST00000466525 PRXQ9BXM0 1461 aa22.2■■□□□ 1.14
GAPDH-206ENST00000466525 CUX1P39880 1505 aa22.16■■□□□ 1.14
GAPDH-206ENST00000466525 HNRNPUL2Q1KMD3 747 aaKnown RBP22.14■■□□□ 1.13
GAPDH-206ENST00000466525 MIER1Q8N108 512 aa22.13■■□□□ 1.13
GAPDH-206ENST00000466525 RRBP1Q9P2E9 1410 aaKnown RBP22.09■■□□□ 1.13
GAPDH-206ENST00000466525 ABCA10Q8WWZ4 1543 aa22.07■■□□□ 1.12
GAPDH-206ENST00000466525 DHX57Q6P158 1386 aaKnown RBP22.07■■□□□ 1.12
GAPDH-206ENST00000466525 PBRM1Q86U86 1689 aa22.07■■□□□ 1.12
GAPDH-206ENST00000466525 ABCA5Q8WWZ7 1642 aa22■■□□□ 1.11
GAPDH-206ENST00000466525 GRIN2AQ12879 1464 aa22■■□□□ 1.11
GAPDH-206ENST00000466525 NUP160Q12769 1436 aa21.96■■□□□ 1.11
GAPDH-206ENST00000466525 MAP3K1Q13233 1512 aa21.96■■□□□ 1.11
GAPDH-206ENST00000466525 KIF27Q86VH2 1401 aa21.95■■□□□ 1.1
GAPDH-206ENST00000466525 YTHDC1Q96MU7 727 aaKnown RBP21.93■■□□□ 1.1
GAPDH-206ENST00000466525 CEP170Q5SW79 1584 aa21.92■■□□□ 1.1
GAPDH-206ENST00000466525 FHAD1B1AJZ9 1412 aa21.9■■□□□ 1.1
GAPDH-206ENST00000466525 ERCC6L2Q5T890 1561 aa21.88■■□□□ 1.09
GAPDH-206ENST00000466525 ADAMTS12P58397 1594 aa21.87■■□□□ 1.09
GAPDH-206ENST00000466525 SHROOM2Q13796 1616 aa21.86■■□□□ 1.09
GAPDH-206ENST00000466525 ARHGAP35Q9NRY4 1499 aa21.84■■□□□ 1.09
GAPDH-206ENST00000466525 CCNB3Q8WWL7 1395 aa21.84■■□□□ 1.09
GAPDH-206ENST00000466525 NPM1P06748 294 aaKnown RBP eCLIP21.81■■□□□ 1.08
GAPDH-206ENST00000466525 KANK4Q5T7N3 995 aaPredicted RBP21.8■■□□□ 1.08
GAPDH-206ENST00000466525 JPH4Q96JJ6 628 aa21.79■■□□□ 1.08
GAPDH-206ENST00000466525 PRG4Q92954 1404 aaPredicted RBP21.78■■□□□ 1.08
GAPDH-206ENST00000466525 TIAM1Q13009 1591 aa21.76■■□□□ 1.07
GAPDH-206ENST00000466525 KIF13AQ9H1H9 1805 aa21.74■■□□□ 1.07
GAPDH-206ENST00000466525 FAM69CQ0P6D2 419 aa21.74■■□□□ 1.07
GAPDH-206ENST00000466525 ABCC10Q5T3U5 1492 aa21.73■■□□□ 1.07
GAPDH-206ENST00000466525 MAPKBP1O60336 1514 aa21.7■■□□□ 1.06
GAPDH-206ENST00000466525 CFAP43Q8NDM7 1665 aa21.68■■□□□ 1.06
GAPDH-206ENST00000466525 SUPT16HQ9Y5B9 1047 aaKnown RBP21.66■■□□□ 1.06
GAPDH-206ENST00000466525 RANGAP1P46060 587 aaPredicted RBP21.63■■□□□ 1.05
GAPDH-206ENST00000466525 TIMELESSQ9UNS1 1208 aa21.63■■□□□ 1.05
GAPDH-206ENST00000466525 RAB3GAP2Q9H2M9 1393 aa21.62■■□□□ 1.05
GAPDH-206ENST00000466525 LRRC9Q6ZRR7 1453 aa21.62■■□□□ 1.05
GAPDH-206ENST00000466525 IGF1RP08069 1367 aa21.61■■□□□ 1.05
GAPDH-206ENST00000466525 SETD5Q9C0A6 1442 aa21.61■■□□□ 1.05
GAPDH-206ENST00000466525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.58■■□□□ 1.05
GAPDH-206ENST00000466525 DIP2BQ9P265 1576 aa21.58■■□□□ 1.04
GAPDH-206ENST00000466525 KDM6BO15054 1643 aa21.54■■□□□ 1.04
GAPDH-206ENST00000466525 KDM4FA0A1W2PPD8 638 aa21.54■■□□□ 1.04
GAPDH-206ENST00000466525 KIAA0586Q9BVV6 1533 aa21.52■■□□□ 1.04
GAPDH-206ENST00000466525 CARMIL1Q5VZK9 1371 aa21.51■■□□□ 1.03
GAPDH-206ENST00000466525 EFCAB5A4FU69 1503 aa21.51■■□□□ 1.03
GAPDH-206ENST00000466525 ADCY10Q96PN6 1610 aa21.5■■□□□ 1.03
GAPDH-206ENST00000466525 FYCO1Q9BQS8 1478 aa21.47■■□□□ 1.03
GAPDH-206ENST00000466525 PCF11O94913 1555 aaKnown RBP21.46■■□□□ 1.03
GAPDH-206ENST00000466525 PHLDB1Q86UU1 1377 aa21.45■■□□□ 1.02
GAPDH-206ENST00000466525 PTPRGP23470 1445 aa21.43■■□□□ 1.02
GAPDH-206ENST00000466525 CUL7Q14999 1698 aa21.4■■□□□ 1.02
GAPDH-206ENST00000466525 CARMIL2Q6F5E8 1435 aa21.39■■□□□ 1.01
GAPDH-206ENST00000466525 CASKIN1Q8WXD9 1431 aa21.39■■□□□ 1.01
GAPDH-206ENST00000466525 CCER2I3L3R5 266 aa21.38■■□□□ 1.01
GAPDH-206ENST00000466525 TSHZ2Q9NRE2 1034 aa21.38■■□□□ 1.01
GAPDH-206ENST00000466525 PLB1Q6P1J6 1458 aa21.38■■□□□ 1.01
GAPDH-206ENST00000466525 ILDR1Q86SU0 546 aaPredicted RBP21.38■■□□□ 1.01
GAPDH-206ENST00000466525 TSPOAP1O95153 1857 aa21.37■■□□□ 1.01
GAPDH-206ENST00000466525 CTTNBP2Q8WZ74 1663 aa21.37■■□□□ 1.01
GAPDH-206ENST00000466525 PPP1R15AO75807 674 aaPredicted RBP21.35■■□□□ 1.01
GAPDH-206ENST00000466525 ABCC2Q92887 1545 aa21.34■■□□□ 1.01
GAPDH-206ENST00000466525 GLI2P10070 1586 aa21.33■■□□□ 1.01
GAPDH-206ENST00000466525 ITGAEP38570 1179 aa21.31■■□□□ 1
GAPDH-206ENST00000466525 ASXL2Q76L83 1435 aa21.29■■□□□ 1
GAPDH-206ENST00000466525 UHRF1BP1LA0JNW5 1464 aa21.29■■□□□ 1
GAPDH-206ENST00000466525 FMN1Q68DA7 1419 aa21.27■■□□□ 1
GAPDH-206ENST00000466525 ADGRL1O94910 1474 aa21.24■□□□□ 0.99
GAPDH-206ENST00000466525 FGD6Q6ZV73 1430 aa21.24■□□□□ 0.99
GAPDH-206ENST00000466525 TEX14Q8IWB6 1497 aa21.24■□□□□ 0.99
GAPDH-206ENST00000466525 HFM1A2PYH4 1435 aa21.24■□□□□ 0.99
GAPDH-206ENST00000466525 UACAQ9BZF9 1416 aa21.24■□□□□ 0.99
GAPDH-206ENST00000466525 DDX10Q13206 875 aaKnown RBP21.21■□□□□ 0.99
GAPDH-206ENST00000466525 FAM50AQ14320 339 aaKnown RBP21.21■□□□□ 0.99
GAPDH-206ENST00000466525 KCNH8Q96L42 1107 aa21.21■□□□□ 0.99
GAPDH-206ENST00000466525 SIN3AQ96ST3 1273 aa21.21■□□□□ 0.99
GAPDH-206ENST00000466525 ANP32EQ9BTT0 268 aa21.21■□□□□ 0.99
GAPDH-206ENST00000466525 SAMD9Q5K651 1589 aa21.21■□□□□ 0.99
GAPDH-206ENST00000466525 PTPN23Q9H3S7 1636 aa21.2■□□□□ 0.98
GAPDH-206ENST00000466525 FHOD3Q2V2M9 1422 aa21.2■□□□□ 0.98
GAPDH-206ENST00000466525 CCDC18Q5T9S5 1454 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms