RNA–Protein interactions for RNA: ENST00000463728.1

LRP11-203, Transcript of LDL receptor related protein 11, humanhuman

TSL 2

Gene LRP11, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP11-203ENST00000463728 CHD1O14646 1710 aa14.62□□□□□ -0.07
LRP11-203ENST00000463728 SYNJ2O15056 1496 aa14.62□□□□□ -0.07
LRP11-203ENST00000463728 UBTFP17480 764 aaKnown RBP14.6□□□□□ -0.07
LRP11-203ENST00000463728 FBLN2P98095 1184 aa14.6□□□□□ -0.07
LRP11-203ENST00000463728 GRIN2AQ12879 1464 aa14.59□□□□□ -0.07
LRP11-203ENST00000463728 CHMP7Q8WUX9 453 aaPredicted RBP14.58□□□□□ -0.08
LRP11-203ENST00000463728 CTTNBP2Q8WZ74 1663 aa14.56□□□□□ -0.08
LRP11-203ENST00000463728 TNIKQ9UKE5 1360 aa14.54□□□□□ -0.08
LRP11-203ENST00000463728 CEP170Q5SW79 1584 aa14.54□□□□□ -0.08
LRP11-203ENST00000463728 RANGAP1P46060 587 aaPredicted RBP14.52□□□□□ -0.09
LRP11-203ENST00000463728 MSH5O43196 834 aa14.5□□□□□ -0.09
LRP11-203ENST00000463728 NUP160Q12769 1436 aa14.49□□□□□ -0.09
LRP11-203ENST00000463728 CEP162Q5TB80 1403 aa14.47□□□□□ -0.09
LRP11-203ENST00000463728 IQGAP2Q13576 1575 aa14.47□□□□□ -0.09
LRP11-203ENST00000463728 KIAA0586Q9BVV6 1533 aa14.45□□□□□ -0.1
LRP11-203ENST00000463728 CLIP1P30622 1438 aa14.42□□□□□ -0.1
LRP11-203ENST00000463728 CLASP1Q7Z460 1538 aa14.41□□□□□ -0.1
LRP11-203ENST00000463728 ARHGAP35Q9NRY4 1499 aa14.38□□□□□ -0.11
LRP11-203ENST00000463728 UGGT2Q9NYU1 1516 aa14.37□□□□□ -0.11
LRP11-203ENST00000463728 P3H3Q8IVL6 736 aa14.37□□□□□ -0.11
LRP11-203ENST00000463728 SAMD9Q5K651 1589 aa14.36□□□□□ -0.11
LRP11-203ENST00000463728 SHROOM2Q13796 1616 aa14.35□□□□□ -0.11
LRP11-203ENST00000463728 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
LRP11-203ENST00000463728 ARAP1Q96P48 1450 aa14.35□□□□□ -0.11
LRP11-203ENST00000463728 EFCAB5A4FU69 1503 aa14.35□□□□□ -0.11
LRP11-203ENST00000463728 JPH4Q96JJ6 628 aa14.34□□□□□ -0.11
LRP11-203ENST00000463728 KIAA0556O60303 1618 aa14.33□□□□□ -0.11
LRP11-203ENST00000463728 FHOD3Q2V2M9 1422 aa14.33□□□□□ -0.11
LRP11-203ENST00000463728 DISP1Q96F81 1524 aa14.33□□□□□ -0.12
LRP11-203ENST00000463728 ERCC6L2Q5T890 1561 aa14.32□□□□□ -0.12
LRP11-203ENST00000463728 PRG4Q92954 1404 aaPredicted RBP14.31□□□□□ -0.12
LRP11-203ENST00000463728 TTBK1Q5TCY1 1321 aaPredicted RBP14.29□□□□□ -0.12
LRP11-203ENST00000463728 CARMIL2Q6F5E8 1435 aa14.26□□□□□ -0.13
LRP11-203ENST00000463728 VPS8Q8N3P4 1428 aa14.24□□□□□ -0.13
LRP11-203ENST00000463728 PCF11O94913 1555 aaKnown RBP14.23□□□□□ -0.13
LRP11-203ENST00000463728 FMN1Q68DA7 1419 aa14.19□□□□□ -0.14
LRP11-203ENST00000463728 PTPRGP23470 1445 aa14.17□□□□□ -0.14
LRP11-203ENST00000463728 ARHGEF11O15085 1522 aa14.17□□□□□ -0.14
LRP11-203ENST00000463728 ATP1B4Q9UN42 357 aaPredicted RBP14.17□□□□□ -0.14
LRP11-203ENST00000463728 RAPGEF6Q8TEU7 1601 aa14.16□□□□□ -0.14
LRP11-203ENST00000463728 PLB1Q6P1J6 1458 aa14.16□□□□□ -0.14
LRP11-203ENST00000463728 RIMBP3CA6NJZ7 1639 aa14.15□□□□□ -0.14
LRP11-203ENST00000463728 RIMBP3BA6NNM3 1639 aa14.15□□□□□ -0.14
LRP11-203ENST00000463728 RIMBP3Q9UFD9 1639 aa14.15□□□□□ -0.14
LRP11-203ENST00000463728 LRRIQ1Q96JM4 1722 aa14.15□□□□□ -0.14
LRP11-203ENST00000463728 CASKIN1Q8WXD9 1431 aa14.15□□□□□ -0.14
LRP11-203ENST00000463728 ABCA8O94911 1581 aa14.14□□□□□ -0.15
LRP11-203ENST00000463728 FYCO1Q9BQS8 1478 aa14.14□□□□□ -0.15
LRP11-203ENST00000463728 HECW1Q76N89 1606 aa14.13□□□□□ -0.15
LRP11-203ENST00000463728 ARID3CA6NKF2 412 aa14.13□□□□□ -0.15
LRP11-203ENST00000463728 PPARGC1BQ86YN6 1023 aaKnown RBP14.1□□□□□ -0.15
LRP11-203ENST00000463728 NUP153P49790 1475 aaKnown RBP14.1□□□□□ -0.15
LRP11-203ENST00000463728 CFAP43Q8NDM7 1665 aa14.1□□□□□ -0.15
LRP11-203ENST00000463728 UACAQ9BZF9 1416 aa14.09□□□□□ -0.15
LRP11-203ENST00000463728 CDK13Q14004 1512 aaKnown RBP14.09□□□□□ -0.15
LRP11-203ENST00000463728 TIAM1Q13009 1591 aa14.08□□□□□ -0.16
LRP11-203ENST00000463728 ABCC2Q92887 1545 aa14.07□□□□□ -0.16
LRP11-203ENST00000463728 ADCY10Q96PN6 1610 aa14.07□□□□□ -0.16
LRP11-203ENST00000463728 EPRSP07814 1512 aaKnown RBP14.06□□□□□ -0.16
LRP11-203ENST00000463728 APLP2Q06481 763 aa14.06□□□□□ -0.16
LRP11-203ENST00000463728 CCDC18Q5T9S5 1454 aa14.04□□□□□ -0.16
LRP11-203ENST00000463728 UHRF1BP1LA0JNW5 1464 aa14.03□□□□□ -0.16
LRP11-203ENST00000463728 MAP3K1Q13233 1512 aa14.02□□□□□ -0.16
LRP11-203ENST00000463728 ATP10BO94823 1461 aa14.02□□□□□ -0.16
LRP11-203ENST00000463728 KANK4Q5T7N3 995 aaPredicted RBP14.02□□□□□ -0.17
LRP11-203ENST00000463728 CYB5RLQ6IPT4 315 aa14.02□□□□□ -0.17
LRP11-203ENST00000463728 ZCCHC11Q5TAX3 1644 aaKnown RBP14.01□□□□□ -0.17
LRP11-203ENST00000463728 MAGI3Q5TCQ9 1506 aa14.01□□□□□ -0.17
LRP11-203ENST00000463728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.01□□□□□ -0.17
LRP11-203ENST00000463728 HNRNPUL2Q1KMD3 747 aaKnown RBP14.01□□□□□ -0.17
LRP11-203ENST00000463728 LRRC9Q6ZRR7 1453 aa13.99□□□□□ -0.17
LRP11-203ENST00000463728 KDM5BQ9UGL1 1544 aa13.98□□□□□ -0.17
LRP11-203ENST00000463728 MTUS2Q5JR59 1369 aa13.96□□□□□ -0.17
LRP11-203ENST00000463728 EHBP1L1Q8N3D4 1523 aa13.96□□□□□ -0.17
LRP11-203ENST00000463728 DNAJC5Q9H3Z4 198 aa13.94□□□□□ -0.18
LRP11-203ENST00000463728 TROQ12816 1431 aaPredicted RBP13.92□□□□□ -0.18
LRP11-203ENST00000463728 KIF14Q15058 1648 aa13.92□□□□□ -0.18
LRP11-203ENST00000463728 SUPT6HQ7KZ85 1726 aaKnown RBP13.91□□□□□ -0.18
LRP11-203ENST00000463728 CDK11AQ9UQ88 783 aaPredicted RBP13.9□□□□□ -0.18
LRP11-203ENST00000463728 PLEKHD1A6NEE1 506 aa13.89□□□□□ -0.19
LRP11-203ENST00000463728 NPM1P06748 294 aaKnown RBP eCLIP13.89□□□□□ -0.19
LRP11-203ENST00000463728 ASXL2Q76L83 1435 aa13.89□□□□□ -0.19
LRP11-203ENST00000463728 NCOA2Q15596 1464 aa13.88□□□□□ -0.19
LRP11-203ENST00000463728 WDR7Q9Y4E6 1490 aa13.87□□□□□ -0.19
LRP11-203ENST00000463728 PHLDB1Q86UU1 1377 aa13.85□□□□□ -0.19
LRP11-203ENST00000463728 KCNH8Q96L42 1107 aa13.85□□□□□ -0.19
LRP11-203ENST00000463728 TTC37Q6PGP7 1564 aa13.84□□□□□ -0.19
LRP11-203ENST00000463728 MAPKBP1O60336 1514 aa13.83□□□□□ -0.2
LRP11-203ENST00000463728 ABCC10Q5T3U5 1492 aa13.82□□□□□ -0.2
LRP11-203ENST00000463728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.82□□□□□ -0.2
LRP11-203ENST00000463728 CDC42BPAQ5VT25 1732 aa13.81□□□□□ -0.2
LRP11-203ENST00000463728 CCNB3Q8WWL7 1395 aa13.8□□□□□ -0.2
LRP11-203ENST00000463728 MYOM3Q5VTT5 1437 aa13.8□□□□□ -0.2
LRP11-203ENST00000463728 ITSN2Q9NZM3 1697 aa13.79□□□□□ -0.2
LRP11-203ENST00000463728 GPATCH8Q9UKJ3 1502 aaKnown RBP13.78□□□□□ -0.2
LRP11-203ENST00000463728 MYO5CQ9NQX4 1742 aa13.78□□□□□ -0.2
LRP11-203ENST00000463728 FGD6Q6ZV73 1430 aa13.77□□□□□ -0.21
LRP11-203ENST00000463728 PREX2Q70Z35 1606 aa13.77□□□□□ -0.21
LRP11-203ENST00000463728 ABCA9Q8IUA7 1624 aa13.77□□□□□ -0.21
LRP11-203ENST00000463728 TRIM26Q12899 539 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms