RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 ARHGAP35Q9NRY4 1499 aa5.05□□□□□ -1.6
COL8A1-204ENST00000462604 SUPT16HQ9Y5B9 1047 aaKnown RBP5.04□□□□□ -1.6
COL8A1-204ENST00000462604 RAB3GAP2Q9H2M9 1393 aa5.04□□□□□ -1.6
COL8A1-204ENST00000462604 ZBTB22O15209 634 aa5.03□□□□□ -1.6
COL8A1-204ENST00000462604 FHAD1B1AJZ9 1412 aa5.03□□□□□ -1.6
COL8A1-204ENST00000462604 SETD5Q9C0A6 1442 aa5.03□□□□□ -1.6
COL8A1-204ENST00000462604 ITGAEP38570 1179 aa5.02□□□□□ -1.61
COL8A1-204ENST00000462604 IGF1RP08069 1367 aa5.02□□□□□ -1.61
COL8A1-204ENST00000462604 LRRC9Q6ZRR7 1453 aa5.01□□□□□ -1.61
COL8A1-204ENST00000462604 TIAM1Q13009 1591 aa5.01□□□□□ -1.61
COL8A1-204ENST00000462604 TIMELESSQ9UNS1 1208 aa5.01□□□□□ -1.61
COL8A1-204ENST00000462604 CARMIL1Q5VZK9 1371 aa5.01□□□□□ -1.61
COL8A1-204ENST00000462604 MAPKBP1O60336 1514 aa5□□□□□ -1.61
COL8A1-204ENST00000462604 PHLDB1Q86UU1 1377 aa5□□□□□ -1.61
COL8A1-204ENST00000462604 NEFLP07196 543 aa4.99□□□□□ -1.61
COL8A1-204ENST00000462604 FAM50AQ14320 339 aaKnown RBP4.99□□□□□ -1.61
COL8A1-204ENST00000462604 CADPSQ9ULU8 1353 aa4.99□□□□□ -1.61
COL8A1-204ENST00000462604 CCER2I3L3R5 266 aa4.98□□□□□ -1.61
COL8A1-204ENST00000462604 TSHZ2Q9NRE2 1034 aa4.98□□□□□ -1.61
COL8A1-204ENST00000462604 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.98□□□□□ -1.61
COL8A1-204ENST00000462604 AQRO60306 1485 aaKnown RBP eCLIP4.98□□□□□ -1.61
COL8A1-204ENST00000462604 FYCO1Q9BQS8 1478 aa4.98□□□□□ -1.61
COL8A1-204ENST00000462604 EFCAB5A4FU69 1503 aa4.97□□□□□ -1.61
COL8A1-204ENST00000462604 FGD5Q6ZNL6 1462 aa4.97□□□□□ -1.61
COL8A1-204ENST00000462604 ANP32CO43423 234 aa4.97□□□□□ -1.61
COL8A1-204ENST00000462604 TAOK2Q9UL54 1235 aa4.97□□□□□ -1.61
COL8A1-204ENST00000462604 CASKIN1Q8WXD9 1431 aa4.97□□□□□ -1.61
COL8A1-204ENST00000462604 ARXQ96QS3 562 aa4.96□□□□□ -1.62
COL8A1-204ENST00000462604 ATP1B4Q9UN42 357 aaPredicted RBP4.96□□□□□ -1.62
COL8A1-204ENST00000462604 PCF11O94913 1555 aaKnown RBP4.95□□□□□ -1.62
COL8A1-204ENST00000462604 TONSLQ96HA7 1378 aa4.95□□□□□ -1.62
COL8A1-204ENST00000462604 PPP1R15AO75807 674 aaPredicted RBP4.95□□□□□ -1.62
COL8A1-204ENST00000462604 DDX10Q13206 875 aaKnown RBP4.95□□□□□ -1.62
COL8A1-204ENST00000462604 FHOD3Q2V2M9 1422 aa4.95□□□□□ -1.62
COL8A1-204ENST00000462604 FMN1Q68DA7 1419 aa4.95□□□□□ -1.62
COL8A1-204ENST00000462604 CFAP43Q8NDM7 1665 aa4.95□□□□□ -1.62
COL8A1-204ENST00000462604 FKBP8Q14318 412 aa4.94□□□□□ -1.62
COL8A1-204ENST00000462604 SIN3AQ96ST3 1273 aa4.94□□□□□ -1.62
COL8A1-204ENST00000462604 ANP32EQ9BTT0 268 aa4.94□□□□□ -1.62
COL8A1-204ENST00000462604 FGD6Q6ZV73 1430 aa4.94□□□□□ -1.62
COL8A1-204ENST00000462604 FANCD2Q9BXW9 1451 aa4.94□□□□□ -1.62
COL8A1-204ENST00000462604 WDR97A6NE52 1622 aa4.94□□□□□ -1.62
COL8A1-204ENST00000462604 MTUS2Q5JR59 1369 aa4.93□□□□□ -1.62
COL8A1-204ENST00000462604 ABCA10Q8WWZ4 1543 aa4.93□□□□□ -1.62
COL8A1-204ENST00000462604 HFM1A2PYH4 1435 aa4.93□□□□□ -1.62
COL8A1-204ENST00000462604 P3H3Q8IVL6 736 aa4.93□□□□□ -1.62
COL8A1-204ENST00000462604 BCANQ96GW7 911 aa4.93□□□□□ -1.62
COL8A1-204ENST00000462604 KCNH8Q96L42 1107 aa4.93□□□□□ -1.62
COL8A1-204ENST00000462604 UACAQ9BZF9 1416 aa4.93□□□□□ -1.62
COL8A1-204ENST00000462604 CCDC18Q5T9S5 1454 aa4.93□□□□□ -1.62
COL8A1-204ENST00000462604 DNMBPQ6XZF7 1577 aa4.92□□□□□ -1.62
COL8A1-204ENST00000462604 PPP6R1Q9UPN7 881 aa4.91□□□□□ -1.62
COL8A1-204ENST00000462604 THOC2Q8NI27 1593 aaKnown RBP4.91□□□□□ -1.62
COL8A1-204ENST00000462604 CC2D2AQ9P2K1 1620 aa4.9□□□□□ -1.62
COL8A1-204ENST00000462604 MYOM3Q5VTT5 1437 aa4.9□□□□□ -1.62
COL8A1-204ENST00000462604 CUL7Q14999 1698 aa4.9□□□□□ -1.62
COL8A1-204ENST00000462604 POLA1P09884 1462 aaPredicted RBP4.9□□□□□ -1.62
COL8A1-204ENST00000462604 SNAPC4Q5SXM2 1469 aa4.9□□□□□ -1.62
COL8A1-204ENST00000462604 RAD54L2Q9Y4B4 1467 aa4.9□□□□□ -1.62
COL8A1-204ENST00000462604 PLCB2Q00722 1185 aa4.9□□□□□ -1.63
COL8A1-204ENST00000462604 TOPBP1Q92547 1522 aa4.9□□□□□ -1.63
COL8A1-204ENST00000462604 PRDM2Q13029 1718 aa4.89□□□□□ -1.63
COL8A1-204ENST00000462604 EHBP1L1Q8N3D4 1523 aa4.89□□□□□ -1.63
COL8A1-204ENST00000462604 TRIM52Q96A61 297 aa4.89□□□□□ -1.63
COL8A1-204ENST00000462604 NAIPQ13075 1403 aa4.89□□□□□ -1.63
COL8A1-204ENST00000462604 GRIN2BQ13224 1484 aa4.88□□□□□ -1.63
COL8A1-204ENST00000462604 NCOA2Q15596 1464 aa4.88□□□□□ -1.63
COL8A1-204ENST00000462604 PTPN23Q9H3S7 1636 aa4.88□□□□□ -1.63
COL8A1-204ENST00000462604 SENP3Q9H4L4 574 aaPredicted RBP4.88□□□□□ -1.63
COL8A1-204ENST00000462604 AKNAQ7Z591 1439 aa4.88□□□□□ -1.63
COL8A1-204ENST00000462604 HNRNPUQ00839 825 aaKnown RBP eCLIP4.87□□□□□ -1.63
COL8A1-204ENST00000462604 ERICH6BQ5W0A0 696 aa4.87□□□□□ -1.63
COL8A1-204ENST00000462604 HIRIP3Q9BW71 556 aaPredicted RBP4.87□□□□□ -1.63
COL8A1-204ENST00000462604 CDK11AQ9UQ88 783 aaPredicted RBP4.87□□□□□ -1.63
COL8A1-204ENST00000462604 RBM19Q9Y4C8 960 aaKnown RBP4.87□□□□□ -1.63
COL8A1-204ENST00000462604 PTPRKQ15262 1439 aa4.87□□□□□ -1.63
COL8A1-204ENST00000462604 TCOF1Q13428 1488 aaKnown RBP4.87□□□□□ -1.63
COL8A1-204ENST00000462604 NPM3O75607 178 aaKnown RBP4.86□□□□□ -1.63
COL8A1-204ENST00000462604 HSPA5P11021 654 aaKnown RBP4.86□□□□□ -1.63
COL8A1-204ENST00000462604 EIF4G2P78344 907 aaKnown RBP eCLIP4.86□□□□□ -1.63
COL8A1-204ENST00000462604 ERICH6Q7L0X2 663 aa4.86□□□□□ -1.63
COL8A1-204ENST00000462604 CNTLNQ9NXG0 1405 aa4.86□□□□□ -1.63
COL8A1-204ENST00000462604 UGGT2Q9NYU1 1516 aa4.86□□□□□ -1.63
COL8A1-204ENST00000462604 SAMD9Q5K651 1589 aa4.86□□□□□ -1.63
COL8A1-204ENST00000462604 MIA2Q96PC5 1412 aa4.85□□□□□ -1.63
COL8A1-204ENST00000462604 GAPVD1Q14C86 1478 aa4.85□□□□□ -1.63
COL8A1-204ENST00000462604 ARHGEF11O15085 1522 aa4.85□□□□□ -1.63
COL8A1-204ENST00000462604 HECW1Q76N89 1606 aa4.84□□□□□ -1.63
COL8A1-204ENST00000462604 KDM5BQ9UGL1 1544 aa4.84□□□□□ -1.63
COL8A1-204ENST00000462604 PDS5BQ9NTI5 1447 aa4.84□□□□□ -1.63
COL8A1-204ENST00000462604 TDRD9Q8NDG6 1382 aaKnown RBP4.84□□□□□ -1.63
COL8A1-204ENST00000462604 FANCIQ9NVI1 1328 aa4.84□□□□□ -1.63
COL8A1-204ENST00000462604 TULP1O00294 542 aaPredicted RBP4.84□□□□□ -1.63
COL8A1-204ENST00000462604 TPRNQ4KMQ1 711 aa4.84□□□□□ -1.63
COL8A1-204ENST00000462604 SUPT6HQ7KZ85 1726 aaKnown RBP4.83□□□□□ -1.64
COL8A1-204ENST00000462604 CTTNBP2Q8WZ74 1663 aa4.83□□□□□ -1.64
COL8A1-204ENST00000462604 URB2Q14146 1524 aaKnown RBP4.83□□□□□ -1.64
COL8A1-204ENST00000462604 ROCK1Q13464 1354 aa4.83□□□□□ -1.64
COL8A1-204ENST00000462604 CCDC7Q96M83 1385 aa4.83□□□□□ -1.64
COL8A1-204ENST00000462604 WASHC2AQ641Q2 1341 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms