RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 PROM2Q8N271 834 aa9.58□□□□□ -0.88
PDCD4-204ENST00000462577 LAMC3Q9Y6N6 1575 aa9.58□□□□□ -0.88
PDCD4-204ENST00000462577 STAG3Q9UJ98 1225 aa9.54□□□□□ -0.88
PDCD4-204ENST00000462577 KIF21AQ7Z4S6 1674 aa9.54□□□□□ -0.88
PDCD4-204ENST00000462577 PRKAR2AP13861 404 aaKnown RBP9.53□□□□□ -0.88
PDCD4-204ENST00000462577 CHADLQ6NUI6 762 aa9.51□□□□□ -0.89
PDCD4-204ENST00000462577 SP7Q8TDD2 431 aaPredicted RBP9.48□□□□□ -0.89
PDCD4-204ENST00000462577 THOC2Q8NI27 1593 aaKnown RBP9.46□□□□□ -0.9
PDCD4-204ENST00000462577 NESP48681 1621 aa9.45□□□□□ -0.9
PDCD4-204ENST00000462577 CCDC88BA6NC98 1476 aa9.43□□□□□ -0.9
PDCD4-204ENST00000462577 CFTRP13569 1480 aa9.43□□□□□ -0.9
PDCD4-204ENST00000462577 CREBZFQ9NS37 354 aa9.42□□□□□ -0.9
PDCD4-204ENST00000462577 CADPSQ9ULU8 1353 aa9.41□□□□□ -0.9
PDCD4-204ENST00000462577 HAX1O00165 279 aa9.39□□□□□ -0.91
PDCD4-204ENST00000462577 PDS5BQ9NTI5 1447 aa9.39□□□□□ -0.91
PDCD4-204ENST00000462577 ERCC6Q03468 1493 aa9.38□□□□□ -0.91
PDCD4-204ENST00000462577 FARP1Q9Y4F1 1045 aaPredicted RBP9.37□□□□□ -0.91
PDCD4-204ENST00000462577 WDR62O43379 1518 aa9.36□□□□□ -0.91
PDCD4-204ENST00000462577 CUX2O14529 1486 aa9.35□□□□□ -0.91
PDCD4-204ENST00000462577 CEP164Q9UPV0 1460 aa9.35□□□□□ -0.91
PDCD4-204ENST00000462577 FANCD2Q9BXW9 1451 aa9.34□□□□□ -0.91
PDCD4-204ENST00000462577 MIER1Q8N108 512 aa9.33□□□□□ -0.92
PDCD4-204ENST00000462577 MRC2Q9UBG0 1479 aa9.33□□□□□ -0.92
PDCD4-204ENST00000462577 EVX2Q03828 476 aa9.32□□□□□ -0.92
PDCD4-204ENST00000462577 C19orf67A6NJJ6 358 aa9.3□□□□□ -0.92
PDCD4-204ENST00000462577 MNX1P50219 401 aaPredicted RBP9.3□□□□□ -0.92
PDCD4-204ENST00000462577 FBXO3Q9UK99 471 aa9.3□□□□□ -0.92
PDCD4-204ENST00000462577 PLCD3Q8N3E9 789 aa9.28□□□□□ -0.92
PDCD4-204ENST00000462577 DNMBPQ6XZF7 1577 aa9.28□□□□□ -0.92
PDCD4-204ENST00000462577 URB2Q14146 1524 aaKnown RBP9.27□□□□□ -0.93
PDCD4-204ENST00000462577 ABCC8Q09428 1581 aa9.27□□□□□ -0.93
PDCD4-204ENST00000462577 SUPT5HO00267 1087 aaKnown RBP9.26□□□□□ -0.93
PDCD4-204ENST00000462577 BIVM-ERCC5R4GMW8 1640 aa9.25□□□□□ -0.93
PDCD4-204ENST00000462577 PLEKHG5O94827 1062 aa9.25□□□□□ -0.93
PDCD4-204ENST00000462577 WDR97A6NE52 1622 aa9.24□□□□□ -0.93
PDCD4-204ENST00000462577 NPM1P06748 294 aaKnown RBP eCLIP9.24□□□□□ -0.93
PDCD4-204ENST00000462577 TOPBP1Q92547 1522 aa9.23□□□□□ -0.93
PDCD4-204ENST00000462577 CD44P16070 742 aaKnown RBP9.23□□□□□ -0.93
PDCD4-204ENST00000462577 VASPP50552 380 aaPredicted RBP9.21□□□□□ -0.94
PDCD4-204ENST00000462577 TARBP1Q13395 1621 aaKnown RBP9.2□□□□□ -0.94
PDCD4-204ENST00000462577 CUX1P39880 1505 aa9.19□□□□□ -0.94
PDCD4-204ENST00000462577 TOP2BQ02880 1626 aa9.19□□□□□ -0.94
PDCD4-204ENST00000462577 ZRANB1Q9UGI0 708 aa9.16□□□□□ -0.94
PDCD4-204ENST00000462577 PBRM1Q86U86 1689 aa9.16□□□□□ -0.94
PDCD4-204ENST00000462577 EIF4G3O43432 1585 aaKnown RBP9.16□□□□□ -0.94
PDCD4-204ENST00000462577 SYNJ1O43426 1573 aa9.15□□□□□ -0.95
PDCD4-204ENST00000462577 IFT140Q96RY7 1462 aa9.15□□□□□ -0.95
PDCD4-204ENST00000462577 ZBTB47Q9UFB7 747 aaPredicted RBP9.14□□□□□ -0.95
PDCD4-204ENST00000462577 POLA1P09884 1462 aaPredicted RBP9.14□□□□□ -0.95
PDCD4-204ENST00000462577 PAK3O75914 559 aaPredicted RBP9.13□□□□□ -0.95
PDCD4-204ENST00000462577 TSPYL2Q9H2G4 693 aaPredicted RBP9.12□□□□□ -0.95
PDCD4-204ENST00000462577 FGD5Q6ZNL6 1462 aa9.12□□□□□ -0.95
PDCD4-204ENST00000462577 ABCA5Q8WWZ7 1642 aa9.12□□□□□ -0.95
PDCD4-204ENST00000462577 RASEFQ8IZ41 740 aa9.11□□□□□ -0.95
PDCD4-204ENST00000462577 KLHL34Q8N239 644 aa9.11□□□□□ -0.95
PDCD4-204ENST00000462577 GABBR2O75899 941 aa9.1□□□□□ -0.95
PDCD4-204ENST00000462577 NUBP1P53384 320 aa9.1□□□□□ -0.95
PDCD4-204ENST00000462577 CHD1O14646 1710 aa9.1□□□□□ -0.95
PDCD4-204ENST00000462577 WRNQ14191 1432 aaPredicted RBP eCLIP9.09□□□□□ -0.95
PDCD4-204ENST00000462577 IFNLR1Q8IU57 520 aaPredicted RBP9.09□□□□□ -0.95
PDCD4-204ENST00000462577 ZNF579Q8NAF0 562 aaKnown RBP9.09□□□□□ -0.95
PDCD4-204ENST00000462577 PHF12Q96QT6 1004 aa9.07□□□□□ -0.96
PDCD4-204ENST00000462577 ABCA10Q8WWZ4 1543 aa9.06□□□□□ -0.96
PDCD4-204ENST00000462577 ZNF608Q9ULD9 1512 aaPredicted RBP9.06□□□□□ -0.96
PDCD4-204ENST00000462577 RAD54L2Q9Y4B4 1467 aa9.04□□□□□ -0.96
PDCD4-204ENST00000462577 CCDC61Q9Y6R9 512 aa9.04□□□□□ -0.96
PDCD4-204ENST00000462577 SOGA1O94964 1423 aa9.04□□□□□ -0.96
PDCD4-204ENST00000462577 DCAF8Q5TAQ9 597 aa9.01□□□□□ -0.97
PDCD4-204ENST00000462577 CLCN6P51797 869 aa9□□□□□ -0.97
PDCD4-204ENST00000462577 FAM212AQ96EL1 285 aa9□□□□□ -0.97
PDCD4-204ENST00000462577 CUL7Q14999 1698 aa9□□□□□ -0.97
PDCD4-204ENST00000462577 ADAMTS12P58397 1594 aa8.99□□□□□ -0.97
PDCD4-204ENST00000462577 GALR2O43603 387 aaPredicted RBP8.99□□□□□ -0.97
PDCD4-204ENST00000462577 SPOCK2Q92563 424 aa8.99□□□□□ -0.97
PDCD4-204ENST00000462577 MAGI1Q96QZ7 1491 aaPredicted RBP8.99□□□□□ -0.97
PDCD4-204ENST00000462577 ERICH3Q5RHP9 1530 aa8.99□□□□□ -0.97
PDCD4-204ENST00000462577 GRIN2BQ13224 1484 aa8.98□□□□□ -0.97
PDCD4-204ENST00000462577 GAPVD1Q14C86 1478 aa8.98□□□□□ -0.97
PDCD4-204ENST00000462577 AQRO60306 1485 aaKnown RBP eCLIP8.97□□□□□ -0.974e-6■■■■■ 31
PDCD4-204ENST00000462577 KIF12Q96FN5 646 aa8.97□□□□□ -0.97
PDCD4-204ENST00000462577 SNAPC4Q5SXM2 1469 aa8.96□□□□□ -0.98
PDCD4-204ENST00000462577 MS4A3Q96HJ5 214 aa8.95□□□□□ -0.98
PDCD4-204ENST00000462577 MAP3K13O43283 966 aa8.94□□□□□ -0.98
PDCD4-204ENST00000462577 TDRD9Q8NDG6 1382 aaKnown RBP8.93□□□□□ -0.98
PDCD4-204ENST00000462577 SYNJ2O15056 1496 aa8.93□□□□□ -0.98
PDCD4-204ENST00000462577 CLASP1Q7Z460 1538 aa8.92□□□□□ -0.98
PDCD4-204ENST00000462577 POTEIP0CG38 1075 aa8.92□□□□□ -0.98
PDCD4-204ENST00000462577 PYGBP11216 843 aa8.92□□□□□ -0.98
PDCD4-204ENST00000462577 GSE1Q14687 1217 aa8.92□□□□□ -0.98
PDCD4-204ENST00000462577 DCBLD2Q96PD2 775 aa8.91□□□□□ -0.98
PDCD4-204ENST00000462577 CIZ1Q9ULV3 898 aaPredicted RBP8.91□□□□□ -0.98
PDCD4-204ENST00000462577 CTTNBP2Q8WZ74 1663 aa8.91□□□□□ -0.98
PDCD4-204ENST00000462577 KIF27Q86VH2 1401 aa8.89□□□□□ -0.99
PDCD4-204ENST00000462577 PCDHB13Q9Y5F0 798 aa8.89□□□□□ -0.99
PDCD4-204ENST00000462577 SHROOM2Q13796 1616 aa8.89□□□□□ -0.99
PDCD4-204ENST00000462577 GRIN2AQ12879 1464 aa8.88□□□□□ -0.99
PDCD4-204ENST00000462577 FHAD1B1AJZ9 1412 aa8.88□□□□□ -0.99
PDCD4-204ENST00000462577 CEP170Q5SW79 1584 aa8.87□□□□□ -0.99
PDCD4-204ENST00000462577 RUSC2Q8N2Y8 1516 aa8.87□□□□□ -0.99
PDCD4-204ENST00000462577 TRPC6Q9Y210 931 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms