RNA–Protein interactions for RNA: ENST00000461879.5

TSC1-204, Transcript of TSC complex subunit 1, humanhuman

TSL 3

Gene TSC1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-204ENST00000461879 PBRM1Q86U86 1689 aa9.93□□□□□ -0.82
TSC1-204ENST00000461879 CHMP7Q8WUX9 453 aaPredicted RBP9.93□□□□□ -0.82
TSC1-204ENST00000461879 SNAPC4Q5SXM2 1469 aa9.92□□□□□ -0.82
TSC1-204ENST00000461879 PPP4R3CPQ6ZMV5 832 aa9.91□□□□□ -0.82
TSC1-204ENST00000461879 SYNJ2O15056 1496 aa9.91□□□□□ -0.82
TSC1-204ENST00000461879 ADAMTS12P58397 1594 aa9.9□□□□□ -0.82
TSC1-204ENST00000461879 FBLN2P98095 1184 aa9.88□□□□□ -0.83
TSC1-204ENST00000461879 GRIN2AQ12879 1464 aa9.86□□□□□ -0.83
TSC1-204ENST00000461879 CEP162Q5TB80 1403 aa9.86□□□□□ -0.83
TSC1-204ENST00000461879 CLIP1P30622 1438 aa9.84□□□□□ -0.83
TSC1-204ENST00000461879 KIAA0586Q9BVV6 1533 aa9.82□□□□□ -0.84
TSC1-204ENST00000461879 NUP160Q12769 1436 aa9.82□□□□□ -0.84
TSC1-204ENST00000461879 RANGAP1P46060 587 aaPredicted RBP9.81□□□□□ -0.84
TSC1-204ENST00000461879 CTTNBP2Q8WZ74 1663 aa9.8□□□□□ -0.84
TSC1-204ENST00000461879 IQGAP2Q13576 1575 aa9.79□□□□□ -0.84
TSC1-204ENST00000461879 EFCAB5A4FU69 1503 aa9.78□□□□□ -0.84
TSC1-204ENST00000461879 JPH4Q96JJ6 628 aa9.77□□□□□ -0.85
TSC1-204ENST00000461879 OSCARQ8IYS5 282 aa9.76□□□□□ -0.85
TSC1-204ENST00000461879 CEP170Q5SW79 1584 aa9.75□□□□□ -0.85
TSC1-204ENST00000461879 CARMIL2Q6F5E8 1435 aa9.75□□□□□ -0.85
TSC1-204ENST00000461879 ARHGAP35Q9NRY4 1499 aa9.75□□□□□ -0.85
TSC1-204ENST00000461879 UGGT2Q9NYU1 1516 aa9.75□□□□□ -0.85
TSC1-204ENST00000461879 CHD1O14646 1710 aa9.74□□□□□ -0.85
TSC1-204ENST00000461879 APLP2Q06481 763 aa9.74□□□□□ -0.85
TSC1-204ENST00000461879 VPS8Q8N3P4 1428 aa9.73□□□□□ -0.85
TSC1-204ENST00000461879 NCBP3Q53F19 620 aaKnown RBP9.73□□□□□ -0.85
TSC1-204ENST00000461879 SLC4A1APQ9BWU0 796 aaKnown RBP9.73□□□□□ -0.85
TSC1-204ENST00000461879 FMN1Q68DA7 1419 aa9.73□□□□□ -0.85
TSC1-204ENST00000461879 P3H3Q8IVL6 736 aa9.72□□□□□ -0.85
TSC1-204ENST00000461879 ARAP1Q96P48 1450 aa9.71□□□□□ -0.86
TSC1-204ENST00000461879 SAMD9Q5K651 1589 aa9.71□□□□□ -0.86
TSC1-204ENST00000461879 FHOD3Q2V2M9 1422 aa9.69□□□□□ -0.86
TSC1-204ENST00000461879 DISP1Q96F81 1524 aa9.68□□□□□ -0.86
TSC1-204ENST00000461879 PRG4Q92954 1404 aaPredicted RBP9.68□□□□□ -0.86
TSC1-204ENST00000461879 CLASP1Q7Z460 1538 aa9.67□□□□□ -0.86
TSC1-204ENST00000461879 KIAA0556O60303 1618 aa9.67□□□□□ -0.86
TSC1-204ENST00000461879 CASKIN1Q8WXD9 1431 aa9.65□□□□□ -0.86
TSC1-204ENST00000461879 SHROOM2Q13796 1616 aa9.65□□□□□ -0.86
TSC1-204ENST00000461879 ATP1B4Q9UN42 357 aaPredicted RBP9.65□□□□□ -0.86
TSC1-204ENST00000461879 NPM3O75607 178 aaKnown RBP9.64□□□□□ -0.87
TSC1-204ENST00000461879 FYCO1Q9BQS8 1478 aa9.64□□□□□ -0.87
TSC1-204ENST00000461879 PTPRGP23470 1445 aa9.64□□□□□ -0.87
TSC1-204ENST00000461879 MAP3K1Q13233 1512 aa9.61□□□□□ -0.87
TSC1-204ENST00000461879 TTBK1Q5TCY1 1321 aaPredicted RBP9.61□□□□□ -0.87
TSC1-204ENST00000461879 CDK11AQ9UQ88 783 aaPredicted RBP9.6□□□□□ -0.87
TSC1-204ENST00000461879 CCDC18Q5T9S5 1454 aa9.59□□□□□ -0.87
TSC1-204ENST00000461879 HECW1Q76N89 1606 aa9.58□□□□□ -0.88
TSC1-204ENST00000461879 PCF11O94913 1555 aaKnown RBP9.58□□□□□ -0.88
TSC1-204ENST00000461879 UACAQ9BZF9 1416 aa9.57□□□□□ -0.88
TSC1-204ENST00000461879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.56□□□□□ -0.88
TSC1-204ENST00000461879 HNRNPUL2Q1KMD3 747 aaKnown RBP9.56□□□□□ -0.88
TSC1-204ENST00000461879 RAPGEF6Q8TEU7 1601 aa9.56□□□□□ -0.88
TSC1-204ENST00000461879 TIAM1Q13009 1591 aa9.55□□□□□ -0.88
TSC1-204ENST00000461879 PLB1Q6P1J6 1458 aa9.55□□□□□ -0.88
TSC1-204ENST00000461879 EPRSP07814 1512 aaKnown RBP9.55□□□□□ -0.88
TSC1-204ENST00000461879 ABCA8O94911 1581 aa9.54□□□□□ -0.88
TSC1-204ENST00000461879 MTUS2Q5JR59 1369 aa9.54□□□□□ -0.88
TSC1-204ENST00000461879 TRIM26Q12899 539 aaPredicted RBP9.54□□□□□ -0.88
TSC1-204ENST00000461879 ERCC6L2Q5T890 1561 aa9.54□□□□□ -0.88
TSC1-204ENST00000461879 UHRF1BP1LA0JNW5 1464 aa9.53□□□□□ -0.88
TSC1-204ENST00000461879 NUP153P49790 1475 aaKnown RBP9.53□□□□□ -0.88
TSC1-204ENST00000461879 LRRC9Q6ZRR7 1453 aa9.53□□□□□ -0.88
TSC1-204ENST00000461879 PLEKHD1A6NEE1 506 aa9.53□□□□□ -0.88
TSC1-204ENST00000461879 KANK4Q5T7N3 995 aaPredicted RBP9.53□□□□□ -0.88
TSC1-204ENST00000461879 PPARGC1BQ86YN6 1023 aaKnown RBP9.53□□□□□ -0.88
TSC1-204ENST00000461879 NPM1P06748 294 aaKnown RBP eCLIP9.52□□□□□ -0.89
TSC1-204ENST00000461879 CNKSR2Q8WXI2 1034 aa9.52□□□□□ -0.89
TSC1-204ENST00000461879 CFAP43Q8NDM7 1665 aa9.51□□□□□ -0.89
TSC1-204ENST00000461879 ABCC2Q92887 1545 aa9.51□□□□□ -0.89
TSC1-204ENST00000461879 ARHGEF11O15085 1522 aa9.51□□□□□ -0.89
TSC1-204ENST00000461879 ARID3CA6NKF2 412 aa9.5□□□□□ -0.89
TSC1-204ENST00000461879 SCAF1Q9H7N4 1312 aaKnown RBP9.5□□□□□ -0.89
TSC1-204ENST00000461879 ATP10BO94823 1461 aa9.49□□□□□ -0.89
TSC1-204ENST00000461879 EHBP1L1Q8N3D4 1523 aa9.49□□□□□ -0.89
TSC1-204ENST00000461879 CDK13Q14004 1512 aaKnown RBP9.48□□□□□ -0.89
TSC1-204ENST00000461879 TROQ12816 1431 aaPredicted RBP9.48□□□□□ -0.89
TSC1-204ENST00000461879 KDM5BQ9UGL1 1544 aa9.47□□□□□ -0.89
TSC1-204ENST00000461879 MSH5O43196 834 aa9.46□□□□□ -0.9
TSC1-204ENST00000461879 CYB5RLQ6IPT4 315 aa9.46□□□□□ -0.9
TSC1-204ENST00000461879 SUPT6HQ7KZ85 1726 aaKnown RBP9.45□□□□□ -0.9
TSC1-204ENST00000461879 PCGF6Q9BYE7 350 aa9.44□□□□□ -0.9
TSC1-204ENST00000461879 NCOA2Q15596 1464 aa9.44□□□□□ -0.9
TSC1-204ENST00000461879 RIMBP3CA6NJZ7 1639 aa9.44□□□□□ -0.9
TSC1-204ENST00000461879 RIMBP3BA6NNM3 1639 aa9.44□□□□□ -0.9
TSC1-204ENST00000461879 RIMBP3Q9UFD9 1639 aa9.44□□□□□ -0.9
TSC1-204ENST00000461879 LRRIQ1Q96JM4 1722 aa9.44□□□□□ -0.9
TSC1-204ENST00000461879 ADCY10Q96PN6 1610 aa9.42□□□□□ -0.9
TSC1-204ENST00000461879 RRBP1Q9P2E9 1410 aaKnown RBP9.42□□□□□ -0.9
TSC1-204ENST00000461879 CCNB3Q8WWL7 1395 aa9.42□□□□□ -0.9
TSC1-204ENST00000461879 MAGI3Q5TCQ9 1506 aa9.41□□□□□ -0.9
TSC1-204ENST00000461879 MYOM3Q5VTT5 1437 aa9.41□□□□□ -0.9
TSC1-204ENST00000461879 PHLDB1Q86UU1 1377 aa9.41□□□□□ -0.9
TSC1-204ENST00000461879 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.41□□□□□ -0.9
TSC1-204ENST00000461879 KIF14Q15058 1648 aa9.41□□□□□ -0.9
TSC1-204ENST00000461879 ZCCHC11Q5TAX3 1644 aaKnown RBP9.41□□□□□ -0.9
TSC1-204ENST00000461879 MIA2Q96PC5 1412 aa9.4□□□□□ -0.9
TSC1-204ENST00000461879 KCNH8Q96L42 1107 aa9.4□□□□□ -0.9
TSC1-204ENST00000461879 WDR7Q9Y4E6 1490 aa9.4□□□□□ -0.91
TSC1-204ENST00000461879 MAPK8IP2Q13387 824 aaPredicted RBP9.39□□□□□ -0.91
TSC1-204ENST00000461879 CFDP1Q9UEE9 299 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms