RNA–Protein interactions for RNA: ENST00000461490.1

PDE6B-204, Transcript of phosphodiesterase 6B, humanhuman

TSL 3

Gene PDE6B, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-204ENST00000461490 PRKAR2AP13861 404 aaKnown RBP12.54□□□□□ -0.4
PDE6B-204ENST00000461490 CFTRP13569 1480 aa12.53□□□□□ -0.4
PDE6B-204ENST00000461490 PRDM2Q13029 1718 aa12.52□□□□□ -0.41
PDE6B-204ENST00000461490 CCDC88BA6NC98 1476 aa12.49□□□□□ -0.41
PDE6B-204ENST00000461490 URB2Q14146 1524 aaKnown RBP12.46□□□□□ -0.42
PDE6B-204ENST00000461490 SPDYE2BA6NHP3 402 aa12.45□□□□□ -0.42
PDE6B-204ENST00000461490 SPDYE6P0CI01 402 aa12.45□□□□□ -0.42
PDE6B-204ENST00000461490 SPDYE2Q495Y8 402 aa12.45□□□□□ -0.42
PDE6B-204ENST00000461490 FOXD4L1Q9NU39 408 aa12.43□□□□□ -0.42
PDE6B-204ENST00000461490 PLSCR2Q9NRY7 297 aa12.41□□□□□ -0.42
PDE6B-204ENST00000461490 SPDYE1Q8NFV5 336 aaPredicted RBP12.4□□□□□ -0.42
PDE6B-204ENST00000461490 CLEC11AQ9Y240 323 aa12.38□□□□□ -0.43
PDE6B-204ENST00000461490 TRIM41Q8WV44 630 aa12.37□□□□□ -0.43
PDE6B-204ENST00000461490 TOPBP1Q92547 1522 aa12.33□□□□□ -0.44
PDE6B-204ENST00000461490 ZNF608Q9ULD9 1512 aaPredicted RBP12.32□□□□□ -0.44
PDE6B-204ENST00000461490 IFT140Q96RY7 1462 aa12.29□□□□□ -0.44
PDE6B-204ENST00000461490 SUPT5HO00267 1087 aaKnown RBP12.29□□□□□ -0.44
PDE6B-204ENST00000461490 DNMBPQ6XZF7 1577 aa12.29□□□□□ -0.44
PDE6B-204ENST00000461490 ABCC8Q09428 1581 aa12.28□□□□□ -0.44
PDE6B-204ENST00000461490 POTEIP0CG38 1075 aa12.28□□□□□ -0.44
PDE6B-204ENST00000461490 FBLN2P98095 1184 aa12.25□□□□□ -0.45
PDE6B-204ENST00000461490 EIF4G3O43432 1585 aaKnown RBP12.24□□□□□ -0.45
PDE6B-204ENST00000461490 CHADLQ6NUI6 762 aa12.23□□□□□ -0.45
PDE6B-204ENST00000461490 AQRO60306 1485 aaKnown RBP eCLIP12.22□□□□□ -0.45
PDE6B-204ENST00000461490 TARBP1Q13395 1621 aaKnown RBP12.22□□□□□ -0.45
PDE6B-204ENST00000461490 CHD1O14646 1710 aa12.21□□□□□ -0.45
PDE6B-204ENST00000461490 SSUH2Q9Y2M2 353 aa12.21□□□□□ -0.45
PDE6B-204ENST00000461490 POLA1P09884 1462 aaPredicted RBP12.21□□□□□ -0.46
PDE6B-204ENST00000461490 RAD54L2Q9Y4B4 1467 aa12.21□□□□□ -0.46
PDE6B-204ENST00000461490 SOGA1O94964 1423 aa12.18□□□□□ -0.46
PDE6B-204ENST00000461490 RIMBP3CA6NJZ7 1639 aa12.18□□□□□ -0.46
PDE6B-204ENST00000461490 RIMBP3BA6NNM3 1639 aa12.18□□□□□ -0.46
PDE6B-204ENST00000461490 RIMBP3Q9UFD9 1639 aa12.18□□□□□ -0.46
PDE6B-204ENST00000461490 SLC4A1APQ9BWU0 796 aaKnown RBP12.17□□□□□ -0.46
PDE6B-204ENST00000461490 ZNF692Q9BU19 519 aaPredicted RBP12.16□□□□□ -0.46
PDE6B-204ENST00000461490 TDRD9Q8NDG6 1382 aaKnown RBP12.16□□□□□ -0.46
PDE6B-204ENST00000461490 CUX1P39880 1505 aa12.16□□□□□ -0.46
PDE6B-204ENST00000461490 FGD5Q6ZNL6 1462 aa12.15□□□□□ -0.46
PDE6B-204ENST00000461490 ATXN8OSP0DMR3 200 aa12.14□□□□□ -0.47
PDE6B-204ENST00000461490 CLCN6P51797 869 aa12.14□□□□□ -0.47
PDE6B-204ENST00000461490 CD44P16070 742 aaKnown RBP12.1□□□□□ -0.47
PDE6B-204ENST00000461490 ARHGEF11O15085 1522 aa12.1□□□□□ -0.47
PDE6B-204ENST00000461490 PRR29P0C7W0 189 aa12.09□□□□□ -0.47
PDE6B-204ENST00000461490 MKRN4PQ13434 485 aaPredicted RBP12.09□□□□□ -0.47
PDE6B-204ENST00000461490 SNAPC4Q5SXM2 1469 aa12.08□□□□□ -0.47
PDE6B-204ENST00000461490 CYB5RLQ6IPT4 315 aa12.08□□□□□ -0.48
PDE6B-204ENST00000461490 CHMP7Q8WUX9 453 aaPredicted RBP12.07□□□□□ -0.48
PDE6B-204ENST00000461490 WDR97A6NE52 1622 aa12.07□□□□□ -0.48
PDE6B-204ENST00000461490 PBRM1Q86U86 1689 aa12.06□□□□□ -0.48
PDE6B-204ENST00000461490 GRIN2BQ13224 1484 aa12.03□□□□□ -0.48
PDE6B-204ENST00000461490 DCBLD2Q96PD2 775 aa12.03□□□□□ -0.48
PDE6B-204ENST00000461490 GAPVD1Q14C86 1478 aa12.02□□□□□ -0.48
PDE6B-204ENST00000461490 MAGI1Q96QZ7 1491 aaPredicted RBP12.02□□□□□ -0.49
PDE6B-204ENST00000461490 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
PDE6B-204ENST00000461490 SYNJ1O43426 1573 aa12□□□□□ -0.49
PDE6B-204ENST00000461490 ZBTB22O15209 634 aa11.99□□□□□ -0.49
PDE6B-204ENST00000461490 ARAP1Q96P48 1450 aa11.99□□□□□ -0.49
PDE6B-204ENST00000461490 ABCA5Q8WWZ7 1642 aa11.98□□□□□ -0.49
PDE6B-204ENST00000461490 BIVM-ERCC5R4GMW8 1640 aa11.98□□□□□ -0.49
PDE6B-204ENST00000461490 ABCA10Q8WWZ4 1543 aa11.98□□□□□ -0.49
PDE6B-204ENST00000461490 SYNJ2O15056 1496 aa11.98□□□□□ -0.49
PDE6B-204ENST00000461490 TOP2BQ02880 1626 aa11.97□□□□□ -0.49
PDE6B-204ENST00000461490 CLASP1Q7Z460 1538 aa11.96□□□□□ -0.49
PDE6B-204ENST00000461490 WRNQ14191 1432 aaPredicted RBP eCLIP11.96□□□□□ -0.49
PDE6B-204ENST00000461490 OTUD5Q96G74 571 aa11.96□□□□□ -0.49
PDE6B-204ENST00000461490 POTEMA6NI47 508 aa11.95□□□□□ -0.5
PDE6B-204ENST00000461490 ZNF579Q8NAF0 562 aaKnown RBP11.91□□□□□ -0.5
PDE6B-204ENST00000461490 ADAMTS12P58397 1594 aa11.88□□□□□ -0.51
PDE6B-204ENST00000461490 POTEGQ6S5H5 508 aa11.88□□□□□ -0.51
PDE6B-204ENST00000461490 GRIN2AQ12879 1464 aa11.88□□□□□ -0.51
PDE6B-204ENST00000461490 POTEB2H3BUK9 544 aa11.86□□□□□ -0.51
PDE6B-204ENST00000461490 CEP170Q5SW79 1584 aa11.86□□□□□ -0.51
PDE6B-204ENST00000461490 ERCC6L2Q5T890 1561 aa11.85□□□□□ -0.51
PDE6B-204ENST00000461490 FHAD1B1AJZ9 1412 aa11.85□□□□□ -0.51
PDE6B-204ENST00000461490 ERICH3Q5RHP9 1530 aa11.84□□□□□ -0.51
PDE6B-204ENST00000461490 PCDH10Q9P2E7 1040 aa11.82□□□□□ -0.52
PDE6B-204ENST00000461490 NUP160Q12769 1436 aa11.81□□□□□ -0.52
PDE6B-204ENST00000461490 ZRANB1Q9UGI0 708 aa11.81□□□□□ -0.52
PDE6B-204ENST00000461490 GALR2O43603 387 aaPredicted RBP11.79□□□□□ -0.52
PDE6B-204ENST00000461490 SHROOM2Q13796 1616 aa11.78□□□□□ -0.52
PDE6B-204ENST00000461490 JPH4Q96JJ6 628 aa11.76□□□□□ -0.53
PDE6B-204ENST00000461490 PRG4Q92954 1404 aaPredicted RBP11.75□□□□□ -0.53
PDE6B-204ENST00000461490 KIF27Q86VH2 1401 aa11.73□□□□□ -0.53
PDE6B-204ENST00000461490 IGF1RP08069 1367 aa11.72□□□□□ -0.53
PDE6B-204ENST00000461490 RUSC2Q8N2Y8 1516 aa11.71□□□□□ -0.53
PDE6B-204ENST00000461490 CUL7Q14999 1698 aa11.71□□□□□ -0.54
PDE6B-204ENST00000461490 TTBK1Q5TCY1 1321 aaPredicted RBP11.68□□□□□ -0.54
PDE6B-204ENST00000461490 CARMIL1Q5VZK9 1371 aa11.67□□□□□ -0.54
PDE6B-204ENST00000461490 KIF13AQ9H1H9 1805 aa11.66□□□□□ -0.54
PDE6B-204ENST00000461490 KIAA0586Q9BVV6 1533 aa11.65□□□□□ -0.55
PDE6B-204ENST00000461490 NPM1P06748 294 aaKnown RBP eCLIP11.64□□□□□ -0.55
PDE6B-204ENST00000461490 PELP1Q8IZL8 1130 aaKnown RBP11.64□□□□□ -0.55
PDE6B-204ENST00000461490 CREBZFQ9NS37 354 aa11.64□□□□□ -0.55
PDE6B-204ENST00000461490 ADCY10Q96PN6 1610 aa11.61□□□□□ -0.55
PDE6B-204ENST00000461490 TSPOAP1O95153 1857 aa11.6□□□□□ -0.55
PDE6B-204ENST00000461490 FAM69CQ0P6D2 419 aa11.59□□□□□ -0.55
PDE6B-204ENST00000461490 LCE2DQ5TA82 110 aaPredicted RBP11.59□□□□□ -0.55
PDE6B-204ENST00000461490 PHF12Q96QT6 1004 aa11.58□□□□□ -0.56
PDE6B-204ENST00000461490 IQGAP2Q13576 1575 aa11.58□□□□□ -0.56
PDE6B-204ENST00000461490 POTEJP0CG39 1038 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms