RNA–Protein interactions for RNA: ENST00000461490.1

PDE6B-204, Transcript of phosphodiesterase 6B, humanhuman

TSL 3

Gene PDE6B, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-204ENST00000461490 AEBP2Q6ZN18 517 aaPredicted RBP23.88■■□□□ 1.41
PDE6B-204ENST00000461490 CHIC1Q5VXU3 224 aa22.3■■□□□ 1.16
PDE6B-204ENST00000461490 SENP3Q9H4L4 574 aaPredicted RBP20.49■□□□□ 0.87
PDE6B-204ENST00000461490 PHF23Q9BUL5 403 aaPredicted RBP20.11■□□□□ 0.81
PDE6B-204ENST00000461490 FOXD1Q16676 465 aa19.18■□□□□ 0.66
PDE6B-204ENST00000461490 POTEDQ86YR6 584 aa19.04■□□□□ 0.64
PDE6B-204ENST00000461490 MSH5O43196 834 aa18.24■□□□□ 0.51
PDE6B-204ENST00000461490 PIAS4Q8N2W9 510 aaPredicted RBP17.72■□□□□ 0.43
PDE6B-204ENST00000461490 PPP6R1Q9UPN7 881 aa17.37■□□□□ 0.37
PDE6B-204ENST00000461490 ADRA2BP18089 450 aa17.25■□□□□ 0.35
PDE6B-204ENST00000461490 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
PDE6B-204ENST00000461490 NISCHQ9Y2I1 1504 aa16.75■□□□□ 0.27
PDE6B-204ENST00000461490 DMRT2Q9Y5R5 561 aa16.14■□□□□ 0.17
PDE6B-204ENST00000461490 CACNB1Q02641 598 aaPredicted RBP16.07■□□□□ 0.16
PDE6B-204ENST00000461490 MAPK8IP2Q13387 824 aaPredicted RBP16.06■□□□□ 0.16
PDE6B-204ENST00000461490 SCAF1Q9H7N4 1312 aaKnown RBP15.8■□□□□ 0.12
PDE6B-204ENST00000461490 RNF39Q9H2S5 420 aa15.5■□□□□ 0.07
PDE6B-204ENST00000461490 DCAF8L1A6NGE4 600 aa15.44■□□□□ 0.06
PDE6B-204ENST00000461490 HOXD11P31277 338 aaPredicted RBP15.28■□□□□ 0.04
PDE6B-204ENST00000461490 C1QBPQ07021 282 aaKnown RBP15.23■□□□□ 0.03
PDE6B-204ENST00000461490 ABCC9O60706 1549 aa15.02□□□□□ -0.01
PDE6B-204ENST00000461490 CCDC180Q9P1Z9 1646 aa15.01□□□□□ -0.01
PDE6B-204ENST00000461490 PPP4R3CPQ6ZMV5 832 aa14.99□□□□□ -0.01
PDE6B-204ENST00000461490 RNF216Q9NWF9 866 aaPredicted RBP14.95□□□□□ -0.02
PDE6B-204ENST00000461490 DNAJC5BQ9UF47 199 aa14.93□□□□□ -0.02
PDE6B-204ENST00000461490 CNKSR2Q8WXI2 1034 aa14.89□□□□□ -0.03
PDE6B-204ENST00000461490 POTEHQ6S545 545 aa14.77□□□□□ -0.05
PDE6B-204ENST00000461490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.49□□□□□ -0.09
PDE6B-204ENST00000461490 DCAF8L2P0C7V8 631 aa14.28□□□□□ -0.12
PDE6B-204ENST00000461490 RB1CC1Q8TDY2 1594 aa14.27□□□□□ -0.12
PDE6B-204ENST00000461490 DSG3P32926 999 aa14.27□□□□□ -0.13
PDE6B-204ENST00000461490 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
PDE6B-204ENST00000461490 NACADO15069 1562 aa14.17□□□□□ -0.14
PDE6B-204ENST00000461490 SPINK5Q9NQ38 1064 aaPredicted RBP14.14□□□□□ -0.15
PDE6B-204ENST00000461490 U3KPZ7 1027 aaPredicted RBP14.14□□□□□ -0.15
PDE6B-204ENST00000461490 CAPN15O75808 1086 aa14.13□□□□□ -0.15
PDE6B-204ENST00000461490 UNC13AQ9UPW8 1703 aa14.05□□□□□ -0.16
PDE6B-204ENST00000461490 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
PDE6B-204ENST00000461490 NPM3O75607 178 aaKnown RBP13.98□□□□□ -0.17
PDE6B-204ENST00000461490 MYO15BQ96JP2 1530 aa13.91□□□□□ -0.18
PDE6B-204ENST00000461490 ZCCHC6Q5VYS8 1495 aaKnown RBP13.87□□□□□ -0.19
PDE6B-204ENST00000461490 BICRAQ9NZM4 1560 aa13.85□□□□□ -0.19
PDE6B-204ENST00000461490 DCAF1Q9Y4B6 1507 aa13.77□□□□□ -0.21
PDE6B-204ENST00000461490 SCRIBQ14160 1630 aa13.75□□□□□ -0.21
PDE6B-204ENST00000461490 ABCB7O75027 752 aa13.73□□□□□ -0.21
PDE6B-204ENST00000461490 TRHP20396 242 aaPredicted RBP13.72□□□□□ -0.21
PDE6B-204ENST00000461490 ZNF219Q9P2Y4 722 aaPredicted RBP13.71□□□□□ -0.21
PDE6B-204ENST00000461490 APLP2Q06481 763 aa13.67□□□□□ -0.22
PDE6B-204ENST00000461490 RBM42Q9BTD8 480 aaKnown RBP13.63□□□□□ -0.23
PDE6B-204ENST00000461490 CHRDL2Q6WN34 429 aa13.61□□□□□ -0.23
PDE6B-204ENST00000461490 SHROOM4Q9ULL8 1493 aa13.56□□□□□ -0.24
PDE6B-204ENST00000461490 SLC4A2P04920 1241 aa13.56□□□□□ -0.24
PDE6B-204ENST00000461490 CC2D2AQ9P2K1 1620 aa13.56□□□□□ -0.24
PDE6B-204ENST00000461490 EIF4G1Q04637 1599 aaKnown RBP13.51□□□□□ -0.25
PDE6B-204ENST00000461490 SP7Q8TDD2 431 aaPredicted RBP13.5□□□□□ -0.25
PDE6B-204ENST00000461490 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
PDE6B-204ENST00000461490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.48□□□□□ -0.25
PDE6B-204ENST00000461490 HNRNPUL2Q1KMD3 747 aaKnown RBP13.48□□□□□ -0.25
PDE6B-204ENST00000461490 SAMD1Q6SPF0 538 aaPredicted RBP13.37□□□□□ -0.27
PDE6B-204ENST00000461490 POLA2Q14181 598 aa13.21□□□□□ -0.29
PDE6B-204ENST00000461490 AKT1S1Q96B36 256 aa13.16□□□□□ -0.3
PDE6B-204ENST00000461490 PIP4P2Q8N4L2 257 aa13.13□□□□□ -0.31
PDE6B-204ENST00000461490 SMARCA4P51532 1647 aa13.09□□□□□ -0.31
PDE6B-204ENST00000461490 HAX1O00165 279 aa13.07□□□□□ -0.32
PDE6B-204ENST00000461490 KCNA4P22459 653 aa13.06□□□□□ -0.32
PDE6B-204ENST00000461490 NCAPD3P42695 1498 aa13.05□□□□□ -0.32
PDE6B-204ENST00000461490 ATAD2BQ9ULI0 1458 aa13.05□□□□□ -0.32
PDE6B-204ENST00000461490 REM2Q8IYK8 340 aaPredicted RBP13.03□□□□□ -0.32
PDE6B-204ENST00000461490 SMARCA2P51531 1590 aa13.02□□□□□ -0.33
PDE6B-204ENST00000461490 BAZ1AQ9NRL2 1556 aaPredicted RBP12.99□□□□□ -0.33
PDE6B-204ENST00000461490 HMGXB3Q12766 1538 aa12.97□□□□□ -0.33
PDE6B-204ENST00000461490 MYCNP04198 464 aaPredicted RBP12.96□□□□□ -0.33
PDE6B-204ENST00000461490 ERCC6Q03468 1493 aa12.96□□□□□ -0.34
PDE6B-204ENST00000461490 FXR2P51116 673 aaKnown RBP eCLIP12.95□□□□□ -0.34
PDE6B-204ENST00000461490 BAZ1BQ9UIG0 1483 aaKnown RBP12.95□□□□□ -0.34
PDE6B-204ENST00000461490 MROH2BQ7Z745 1585 aa12.94□□□□□ -0.34
PDE6B-204ENST00000461490 NESP48681 1621 aa12.92□□□□□ -0.34
PDE6B-204ENST00000461490 ZBTB12Q9Y330 459 aaPredicted RBP12.9□□□□□ -0.34
PDE6B-204ENST00000461490 PITPNM1O00562 1244 aa12.89□□□□□ -0.35
PDE6B-204ENST00000461490 PEG3Q9GZU2 1588 aa12.89□□□□□ -0.35
PDE6B-204ENST00000461490 EVX2Q03828 476 aa12.87□□□□□ -0.35
PDE6B-204ENST00000461490 WIZO95785 1651 aa12.84□□□□□ -0.35
PDE6B-204ENST00000461490 CUX2O14529 1486 aa12.84□□□□□ -0.35
PDE6B-204ENST00000461490 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
PDE6B-204ENST00000461490 DNAJC5Q9H3Z4 198 aa12.8□□□□□ -0.36
PDE6B-204ENST00000461490 KIF21AQ7Z4S6 1674 aa12.79□□□□□ -0.36
PDE6B-204ENST00000461490 LAMC3Q9Y6N6 1575 aa12.78□□□□□ -0.36
PDE6B-204ENST00000461490 THOC2Q8NI27 1593 aaKnown RBP12.73□□□□□ -0.37
PDE6B-204ENST00000461490 ATF5Q9Y2D1 282 aaPredicted RBP12.71□□□□□ -0.37
PDE6B-204ENST00000461490 PDS5BQ9NTI5 1447 aa12.71□□□□□ -0.38
PDE6B-204ENST00000461490 CADPSQ9ULU8 1353 aa12.69□□□□□ -0.38
PDE6B-204ENST00000461490 RSF1Q96T23 1441 aaPredicted RBP12.67□□□□□ -0.38
PDE6B-204ENST00000461490 LHX8Q68G74 356 aa12.65□□□□□ -0.38
PDE6B-204ENST00000461490 TOP2AP11388 1531 aaKnown RBP12.61□□□□□ -0.39
PDE6B-204ENST00000461490 MRC2Q9UBG0 1479 aa12.59□□□□□ -0.39
PDE6B-204ENST00000461490 FANCD2Q9BXW9 1451 aa12.57□□□□□ -0.4
PDE6B-204ENST00000461490 CEP164Q9UPV0 1460 aa12.57□□□□□ -0.4
PDE6B-204ENST00000461490 C19orf67A6NJJ6 358 aa12.56□□□□□ -0.4
PDE6B-204ENST00000461490 GABBR2O75899 941 aa12.55□□□□□ -0.4
PDE6B-204ENST00000461490 WDR62O43379 1518 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms