RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 ANP32EQ9BTT0 268 aa20.01■□□□□ 0.79
NCL-207ENST00000461347 DHX57Q6P158 1386 aaKnown RBP19.99■□□□□ 0.79
NCL-207ENST00000461347 CHIC2Q9UKJ5 165 aa19.99■□□□□ 0.79
NCL-207ENST00000461347 FAM9BQ8IZU0 186 aa19.98■□□□□ 0.79
NCL-207ENST00000461347 KCNH8Q96L42 1107 aa19.96■□□□□ 0.79
NCL-207ENST00000461347 TSHZ2Q9NRE2 1034 aa19.94■□□□□ 0.78
NCL-207ENST00000461347 MTUS2Q5JR59 1369 aa19.92■□□□□ 0.78
NCL-207ENST00000461347 RAB3GAP2Q9H2M9 1393 aa19.9■□□□□ 0.78
NCL-207ENST00000461347 RTL5Q5HYW3 569 aaPredicted RBP19.9■□□□□ 0.78
NCL-207ENST00000461347 RRP7BPQ9NSQ0 103 aa19.86■□□□□ 0.77
NCL-207ENST00000461347 MRS2Q9HD23 443 aa19.84■□□□□ 0.77
NCL-207ENST00000461347 BIVM-ERCC5R4GMW8 1640 aa19.83■□□□□ 0.77
NCL-207ENST00000461347 SETD5Q9C0A6 1442 aa19.83■□□□□ 0.76
NCL-207ENST00000461347 CFTRP13569 1480 aa19.8■□□□□ 0.76
NCL-207ENST00000461347 DAXXQ9UER7 740 aaPredicted RBP19.79■□□□□ 0.76
NCL-207ENST00000461347 CUX2O14529 1486 aa19.79■□□□□ 0.76
NCL-207ENST00000461347 EIF4G2P78344 907 aaKnown RBP eCLIP19.78■□□□□ 0.768e-30■□□□□ 8.2
NCL-207ENST00000461347 CARMIL1Q5VZK9 1371 aa19.78■□□□□ 0.76
NCL-207ENST00000461347 RBM19Q9Y4C8 960 aaKnown RBP19.77■□□□□ 0.76
NCL-207ENST00000461347 KIF21BO75037 1637 aa19.75■□□□□ 0.75
NCL-207ENST00000461347 ZNF777Q9ULD5 760 aaPredicted RBP19.74■□□□□ 0.75
NCL-207ENST00000461347 SENP3-EIF4A1A0A087X0R7 540 aa19.73■□□□□ 0.75
NCL-207ENST00000461347 CCER2I3L3R5 266 aa19.72■□□□□ 0.75
NCL-207ENST00000461347 ANP32AP39687 249 aaKnown RBP19.72■□□□□ 0.75
NCL-207ENST00000461347 TIMELESSQ9UNS1 1208 aa19.71■□□□□ 0.75
NCL-207ENST00000461347 SYNJ1O43426 1573 aa19.71■□□□□ 0.75
NCL-207ENST00000461347 TOP2BQ02880 1626 aa19.71■□□□□ 0.75
NCL-207ENST00000461347 PPP1R15AO75807 674 aaPredicted RBP19.7■□□□□ 0.74
NCL-207ENST00000461347 FHAD1B1AJZ9 1412 aa19.7■□□□□ 0.74
NCL-207ENST00000461347 NPM2Q86SE8 214 aaKnown RBP19.69■□□□□ 0.74
NCL-207ENST00000461347 NBR1Q14596 966 aa19.69■□□□□ 0.74
NCL-207ENST00000461347 CCDC136Q96JN2 1154 aa19.68■□□□□ 0.74
NCL-207ENST00000461347 SALL2Q9Y467 1007 aaPredicted RBP19.68■□□□□ 0.74
NCL-207ENST00000461347 FBLN2P98095 1184 aa19.63■□□□□ 0.73
NCL-207ENST00000461347 LAMC3Q9Y6N6 1575 aa19.62■□□□□ 0.73
NCL-207ENST00000461347 TMC1Q8TDI8 760 aa19.61■□□□□ 0.73
NCL-207ENST00000461347 B4GALNT3Q6L9W6 998 aa19.61■□□□□ 0.73
NCL-207ENST00000461347 SLC4A1APQ9BWU0 796 aaKnown RBP19.61■□□□□ 0.73
NCL-207ENST00000461347 ARHGAP35Q9NRY4 1499 aa19.59■□□□□ 0.73
NCL-207ENST00000461347 ARAP1Q96P48 1450 aa19.58■□□□□ 0.72
NCL-207ENST00000461347 PPP4R2Q9NY27 417 aa19.58■□□□□ 0.72
NCL-207ENST00000461347 HSPA5P11021 654 aaKnown RBP19.57■□□□□ 0.72
NCL-207ENST00000461347 MYT1LQ9UL68 1186 aa19.56■□□□□ 0.72
NCL-207ENST00000461347 CUX1P39880 1505 aa19.53■□□□□ 0.72
NCL-207ENST00000461347 FHOD3Q2V2M9 1422 aa19.53■□□□□ 0.72
NCL-207ENST00000461347 KDM2AQ9Y2K7 1162 aa19.53■□□□□ 0.72
NCL-207ENST00000461347 FOXD1Q16676 465 aa19.51■□□□□ 0.71
NCL-207ENST00000461347 ZBTB47Q9UFB7 747 aaPredicted RBP19.51■□□□□ 0.71
NCL-207ENST00000461347 CADPSQ9ULU8 1353 aa19.51■□□□□ 0.71
NCL-207ENST00000461347 RRBP1Q9P2E9 1410 aaKnown RBP19.49■□□□□ 0.71
NCL-207ENST00000461347 WDR97A6NE52 1622 aa19.48■□□□□ 0.71
NCL-207ENST00000461347 PHLDB1Q86UU1 1377 aa19.47■□□□□ 0.71
NCL-207ENST00000461347 PRXQ9BXM0 1461 aa19.44■□□□□ 0.7
NCL-207ENST00000461347 KIF21AQ7Z4S6 1674 aa19.44■□□□□ 0.7
NCL-207ENST00000461347 IGF1RP08069 1367 aa19.44■□□□□ 0.7
NCL-207ENST00000461347 ERICH3Q5RHP9 1530 aa19.4■□□□□ 0.7
NCL-207ENST00000461347 PRKCSHP14314 528 aaPredicted RBP19.38■□□□□ 0.69
NCL-207ENST00000461347 L3MBTL2Q969R5 705 aa19.38■□□□□ 0.69
NCL-207ENST00000461347 DNMBPQ6XZF7 1577 aa19.37■□□□□ 0.69
NCL-207ENST00000461347 MPHOSPH9Q99550 1183 aa19.36■□□□□ 0.69
NCL-207ENST00000461347 FMN1Q68DA7 1419 aa19.36■□□□□ 0.69
NCL-207ENST00000461347 NOP58Q9Y2X3 529 aaKnown RBP19.35■□□□□ 0.69
NCL-207ENST00000461347 LRRC9Q6ZRR7 1453 aa19.35■□□□□ 0.69
NCL-207ENST00000461347 TDRD9Q8NDG6 1382 aaKnown RBP19.34■□□□□ 0.69
NCL-207ENST00000461347 NESP48681 1621 aa19.33■□□□□ 0.69
NCL-207ENST00000461347 CFDP1Q9UEE9 299 aaPredicted RBP19.33■□□□□ 0.68
NCL-207ENST00000461347 TSPY4P0CV99 314 aa19.32■□□□□ 0.68
NCL-207ENST00000461347 TSPY10P0CW01 314 aa19.32■□□□□ 0.68
NCL-207ENST00000461347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.32■□□□□ 0.683e-12■■■■□ 25.3
NCL-207ENST00000461347 CARD11Q9BXL7 1154 aa19.32■□□□□ 0.68
NCL-207ENST00000461347 FANCD2Q9BXW9 1451 aa19.32■□□□□ 0.68
NCL-207ENST00000461347 CCDC18Q5T9S5 1454 aa19.31■□□□□ 0.68
NCL-207ENST00000461347 ERICH6BQ5W0A0 696 aa19.29■□□□□ 0.68
NCL-207ENST00000461347 RGL3Q3MIN7 710 aa19.28■□□□□ 0.68
NCL-207ENST00000461347 EIF5BO60841 1220 aaKnown RBP19.28■□□□□ 0.68
NCL-207ENST00000461347 DEKP35659 375 aaKnown RBP19.28■□□□□ 0.68
NCL-207ENST00000461347 CANXP27824 592 aaKnown RBP19.26■□□□□ 0.67
NCL-207ENST00000461347 PRKRIP1Q9H875 184 aaPredicted RBP19.26■□□□□ 0.67
NCL-207ENST00000461347 FGD5Q6ZNL6 1462 aa19.25■□□□□ 0.67
NCL-207ENST00000461347 DNAJC5BQ9UF47 199 aa19.25■□□□□ 0.67
NCL-207ENST00000461347 URB2Q14146 1524 aaKnown RBP19.23■□□□□ 0.67
NCL-207ENST00000461347 FGD6Q6ZV73 1430 aa19.23■□□□□ 0.67
NCL-207ENST00000461347 TOPBP1Q92547 1522 aa19.23■□□□□ 0.67
NCL-207ENST00000461347 LAS1LQ9Y4W2 734 aaKnown RBP19.22■□□□□ 0.67
NCL-207ENST00000461347 TARBP1Q13395 1621 aaKnown RBP19.2■□□□□ 0.66
NCL-207ENST00000461347 THOC2Q8NI27 1593 aaKnown RBP19.19■□□□□ 0.66
NCL-207ENST00000461347 WASHC2AQ641Q2 1341 aa19.19■□□□□ 0.66
NCL-207ENST00000461347 CHMP7Q8WUX9 453 aaPredicted RBP19.19■□□□□ 0.66
NCL-207ENST00000461347 ABCA5Q8WWZ7 1642 aa19.19■□□□□ 0.66
NCL-207ENST00000461347 UACAQ9BZF9 1416 aa19.18■□□□□ 0.66
NCL-207ENST00000461347 PKD2Q13563 968 aa19.17■□□□□ 0.66
NCL-207ENST00000461347 TIAM1Q13009 1591 aa19.17■□□□□ 0.66
NCL-207ENST00000461347 FANCIQ9NVI1 1328 aa19.17■□□□□ 0.66
NCL-207ENST00000461347 WDR62O43379 1518 aa19.17■□□□□ 0.66
NCL-207ENST00000461347 WDR43Q15061 677 aaKnown RBP eCLIP19.16■□□□□ 0.662e-8■■■□□ 15.1
NCL-207ENST00000461347 RAD54L2Q9Y4B4 1467 aa19.16■□□□□ 0.66
NCL-207ENST00000461347 PLEKHD1A6NEE1 506 aa19.15■□□□□ 0.66
NCL-207ENST00000461347 DCAF11Q8TEB1 546 aa19.15■□□□□ 0.66
NCL-207ENST00000461347 ABCA10Q8WWZ4 1543 aa19.15■□□□□ 0.66
NCL-207ENST00000461347 NUDCQ9Y266 331 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms