RNA–Protein interactions for RNA: ENST00000460563.5

HMGN2-202, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 5

Gene HMGN2, Length 1,045 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-202ENST00000460563 TARBP1Q13395 1621 aaKnown RBP20.02■□□□□ 0.8
HMGN2-202ENST00000460563 ABCC8Q09428 1581 aa20.02■□□□□ 0.8
HMGN2-202ENST00000460563 CHD1O14646 1710 aa20■□□□□ 0.79
HMGN2-202ENST00000460563 POLA2Q14181 598 aa19.99■□□□□ 0.79
HMGN2-202ENST00000460563 POLA1P09884 1462 aaPredicted RBP19.96■□□□□ 0.79
HMGN2-202ENST00000460563 AQRO60306 1485 aaKnown RBP eCLIP19.94■□□□□ 0.789e-13■■■■□ 25.4
HMGN2-202ENST00000460563 ARHGEF11O15085 1522 aa19.93■□□□□ 0.78
HMGN2-202ENST00000460563 FKBP8Q14318 412 aa19.93■□□□□ 0.78
HMGN2-202ENST00000460563 ABCB7O75027 752 aa19.92■□□□□ 0.78
HMGN2-202ENST00000460563 RAD54L2Q9Y4B4 1467 aa19.9■□□□□ 0.78
HMGN2-202ENST00000460563 MKRN4PQ13434 485 aaPredicted RBP19.88■□□□□ 0.77
HMGN2-202ENST00000460563 DSG3P32926 999 aa19.84■□□□□ 0.77
HMGN2-202ENST00000460563 FGD5Q6ZNL6 1462 aa19.84■□□□□ 0.77
HMGN2-202ENST00000460563 CUX1P39880 1505 aa19.83■□□□□ 0.77
HMGN2-202ENST00000460563 CACNB1Q02641 598 aaPredicted RBP19.83■□□□□ 0.77
HMGN2-202ENST00000460563 SOGA1O94964 1423 aa19.81■□□□□ 0.76
HMGN2-202ENST00000460563 TDRD9Q8NDG6 1382 aaKnown RBP19.8■□□□□ 0.76
HMGN2-202ENST00000460563 WDR97A6NE52 1622 aa19.78■□□□□ 0.76
HMGN2-202ENST00000460563 FBLN2P98095 1184 aa19.77■□□□□ 0.76
HMGN2-202ENST00000460563 SNAPC4Q5SXM2 1469 aa19.77■□□□□ 0.76
HMGN2-202ENST00000460563 ARAP1Q96P48 1450 aa19.74■□□□□ 0.75
HMGN2-202ENST00000460563 PBRM1Q86U86 1689 aa19.72■□□□□ 0.75
HMGN2-202ENST00000460563 CYB5RLQ6IPT4 315 aa19.71■□□□□ 0.75
HMGN2-202ENST00000460563 CLASP1Q7Z460 1538 aa19.69■□□□□ 0.74
HMGN2-202ENST00000460563 MAGI1Q96QZ7 1491 aaPredicted RBP19.67■□□□□ 0.74
HMGN2-202ENST00000460563 GRIN2BQ13224 1484 aa19.66■□□□□ 0.74
HMGN2-202ENST00000460563 SYNJ1O43426 1573 aa19.65■□□□□ 0.74
HMGN2-202ENST00000460563 SUPT5HO00267 1087 aaKnown RBP19.64■□□□□ 0.73
HMGN2-202ENST00000460563 ABCA5Q8WWZ7 1642 aa19.62■□□□□ 0.73
HMGN2-202ENST00000460563 ZBTB12Q9Y330 459 aaPredicted RBP19.61■□□□□ 0.73
HMGN2-202ENST00000460563 SYNJ2O15056 1496 aa19.6■□□□□ 0.73
HMGN2-202ENST00000460563 CHMP7Q8WUX9 453 aaPredicted RBP19.59■□□□□ 0.73
HMGN2-202ENST00000460563 GAPVD1Q14C86 1478 aa19.59■□□□□ 0.73
HMGN2-202ENST00000460563 ABCA10Q8WWZ4 1543 aa19.57■□□□□ 0.72
HMGN2-202ENST00000460563 SPDYE4A6NLX3 237 aa19.53■□□□□ 0.72
HMGN2-202ENST00000460563 BIVM-ERCC5R4GMW8 1640 aa19.53■□□□□ 0.72
HMGN2-202ENST00000460563 TOP2BQ02880 1626 aa19.49■□□□□ 0.71
HMGN2-202ENST00000460563 ADAMTS12P58397 1594 aa19.48■□□□□ 0.71
HMGN2-202ENST00000460563 WRNQ14191 1432 aaPredicted RBP eCLIP19.44■□□□□ 0.7
HMGN2-202ENST00000460563 ERCC6L2Q5T890 1561 aa19.44■□□□□ 0.7
HMGN2-202ENST00000460563 GRIN2AQ12879 1464 aa19.43■□□□□ 0.7
HMGN2-202ENST00000460563 CEP170Q5SW79 1584 aa19.43■□□□□ 0.7
HMGN2-202ENST00000460563 NUP160Q12769 1436 aa19.35■□□□□ 0.69
HMGN2-202ENST00000460563 SHROOM2Q13796 1616 aa19.33■□□□□ 0.69
HMGN2-202ENST00000460563 ERICH3Q5RHP9 1530 aa19.33■□□□□ 0.68
HMGN2-202ENST00000460563 PROM2Q8N271 834 aa19.32■□□□□ 0.68
HMGN2-202ENST00000460563 FHAD1B1AJZ9 1412 aa19.32■□□□□ 0.68
HMGN2-202ENST00000460563 RUSC2Q8N2Y8 1516 aa19.21■□□□□ 0.67
HMGN2-202ENST00000460563 SPDYE2BA6NHP3 402 aa19.16■□□□□ 0.66
HMGN2-202ENST00000460563 SPDYE6P0CI01 402 aa19.16■□□□□ 0.66
HMGN2-202ENST00000460563 SPDYE2Q495Y8 402 aa19.16■□□□□ 0.66
HMGN2-202ENST00000460563 KIF13AQ9H1H9 1805 aa19.16■□□□□ 0.66
HMGN2-202ENST00000460563 PRG4Q92954 1404 aaPredicted RBP19.16■□□□□ 0.66
HMGN2-202ENST00000460563 ZNF692Q9BU19 519 aaPredicted RBP19.15■□□□□ 0.66
HMGN2-202ENST00000460563 SSUH2Q9Y2M2 353 aa19.11■□□□□ 0.65
HMGN2-202ENST00000460563 JPH4Q96JJ6 628 aa19.09■□□□□ 0.65
HMGN2-202ENST00000460563 CUL7Q14999 1698 aa19.08■□□□□ 0.65
HMGN2-202ENST00000460563 ADCY10Q96PN6 1610 aa19.04■□□□□ 0.64
HMGN2-202ENST00000460563 KIF27Q86VH2 1401 aa19.03■□□□□ 0.64
HMGN2-202ENST00000460563 FBXO3Q9UK99 471 aa19.03■□□□□ 0.64
HMGN2-202ENST00000460563 IGF1RP08069 1367 aa19.03■□□□□ 0.64
HMGN2-202ENST00000460563 KIAA0586Q9BVV6 1533 aa19■□□□□ 0.63
HMGN2-202ENST00000460563 DIP2BQ9P265 1576 aa18.96■□□□□ 0.63
HMGN2-202ENST00000460563 MAPKBP1O60336 1514 aa18.95■□□□□ 0.62
HMGN2-202ENST00000460563 ABCC10Q5T3U5 1492 aa18.93■□□□□ 0.62
HMGN2-202ENST00000460563 CARMIL1Q5VZK9 1371 aa18.91■□□□□ 0.62
HMGN2-202ENST00000460563 TSPOAP1O95153 1857 aa18.9■□□□□ 0.62
HMGN2-202ENST00000460563 FAM69CQ0P6D2 419 aa18.88■□□□□ 0.61
HMGN2-202ENST00000460563 IQGAP2Q13576 1575 aa18.88■□□□□ 0.61
HMGN2-202ENST00000460563 NPM1P06748 294 aaKnown RBP eCLIP18.86■□□□□ 0.61
HMGN2-202ENST00000460563 TTBK1Q5TCY1 1321 aaPredicted RBP18.85■□□□□ 0.61
HMGN2-202ENST00000460563 RTN4Q9NQC3 1192 aaKnown RBP18.85■□□□□ 0.61
HMGN2-202ENST00000460563 VASPP50552 380 aaPredicted RBP18.84■□□□□ 0.61
HMGN2-202ENST00000460563 PTPRGP23470 1445 aa18.81■□□□□ 0.6
HMGN2-202ENST00000460563 KDM6BO15054 1643 aa18.79■□□□□ 0.6
HMGN2-202ENST00000460563 RBM42Q9BTD8 480 aaKnown RBP18.79■□□□□ 0.6
HMGN2-202ENST00000460563 TNIKQ9UKE5 1360 aa18.79■□□□□ 0.6
HMGN2-202ENST00000460563 CARMIL2Q6F5E8 1435 aa18.78■□□□□ 0.6
HMGN2-202ENST00000460563 AMER1Q5JTC6 1135 aaPredicted RBP18.78■□□□□ 0.6
HMGN2-202ENST00000460563 DISP1Q96F81 1524 aa18.78■□□□□ 0.6
HMGN2-202ENST00000460563 ABCC2Q92887 1545 aa18.76■□□□□ 0.59
HMGN2-202ENST00000460563 PPRC1Q5VV67 1664 aaKnown RBP18.75■□□□□ 0.59
HMGN2-202ENST00000460563 RAPGEF2Q9Y4G8 1499 aa18.74■□□□□ 0.59
HMGN2-202ENST00000460563 CTTNBP2Q8WZ74 1663 aa18.73■□□□□ 0.59
HMGN2-202ENST00000460563 KIAA0556O60303 1618 aa18.73■□□□□ 0.59
HMGN2-202ENST00000460563 UGGT2Q9NYU1 1516 aa18.72■□□□□ 0.59
HMGN2-202ENST00000460563 ASXL2Q76L83 1435 aa18.71■□□□□ 0.59
HMGN2-202ENST00000460563 UHRF1BP1LA0JNW5 1464 aa18.71■□□□□ 0.59
HMGN2-202ENST00000460563 ZCCHC11Q5TAX3 1644 aaKnown RBP18.7■□□□□ 0.58
HMGN2-202ENST00000460563 UACAQ9BZF9 1416 aa18.69■□□□□ 0.58
HMGN2-202ENST00000460563 AKT1S1Q96B36 256 aa18.69■□□□□ 0.58
HMGN2-202ENST00000460563 GLI2P10070 1586 aa18.68■□□□□ 0.58
HMGN2-202ENST00000460563 PLB1Q6P1J6 1458 aa18.66■□□□□ 0.58
HMGN2-202ENST00000460563 IFNLR1Q8IU57 520 aaPredicted RBP18.65■□□□□ 0.58
HMGN2-202ENST00000460563 STAG3Q9UJ98 1225 aa18.65■□□□□ 0.58
HMGN2-202ENST00000460563 KDM5BQ9UGL1 1544 aa18.64■□□□□ 0.57
HMGN2-202ENST00000460563 MAP3K4Q9Y6R4 1608 aa18.63■□□□□ 0.57
HMGN2-202ENST00000460563 EPRSP07814 1512 aaKnown RBP18.61■□□□□ 0.57
HMGN2-202ENST00000460563 KDM4FA0A1W2PPD8 638 aa18.57■□□□□ 0.56
HMGN2-202ENST00000460563 REM2Q8IYK8 340 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms