RNA–Protein interactions for RNA: ENST00000455743.5

BARD1-204, Transcript of BRCA1 associated RING domain 1, humanhuman

TSL 5

Gene BARD1, Length 2,261 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-204ENST00000455743 PHLDB1Q86UU1 1377 aa23.3■■□□□ 1.32
BARD1-204ENST00000455743 P3H3Q8IVL6 736 aa23.3■■□□□ 1.32
BARD1-204ENST00000455743 FHAD1B1AJZ9 1412 aa23.3■■□□□ 1.32
BARD1-204ENST00000455743 MAPKBP1O60336 1514 aa23.28■■□□□ 1.32
BARD1-204ENST00000455743 SETD5Q9C0A6 1442 aa23.28■■□□□ 1.32
BARD1-204ENST00000455743 FAM50AQ14320 339 aaKnown RBP23.24■■□□□ 1.31
BARD1-204ENST00000455743 RAD54L2Q9Y4B4 1467 aa23.24■■□□□ 1.31
BARD1-204ENST00000455743 PCF11O94913 1555 aaKnown RBP23.24■■□□□ 1.31
BARD1-204ENST00000455743 ATP1B4Q9UN42 357 aaPredicted RBP23.24■■□□□ 1.31
BARD1-204ENST00000455743 CFAP43Q8NDM7 1665 aa23.23■■□□□ 1.31
BARD1-204ENST00000455743 DNMBPQ6XZF7 1577 aa23.22■■□□□ 1.31
BARD1-204ENST00000455743 ABCA10Q8WWZ4 1543 aa23.2■■□□□ 1.3
BARD1-204ENST00000455743 FHOD3Q2V2M9 1422 aa23.19■■□□□ 1.3
BARD1-204ENST00000455743 POLA1P09884 1462 aaPredicted RBP23.18■■□□□ 1.3
BARD1-204ENST00000455743 TOPBP1Q92547 1522 aa23.17■■□□□ 1.3
BARD1-204ENST00000455743 SIN3AQ96ST3 1273 aa23.14■■□□□ 1.29
BARD1-204ENST00000455743 FYCO1Q9BQS8 1478 aa23.13■■□□□ 1.29
BARD1-204ENST00000455743 EFCAB5A4FU69 1503 aa23.12■■□□□ 1.29
BARD1-204ENST00000455743 NESP48681 1621 aa23.12■■□□□ 1.29
BARD1-204ENST00000455743 CASKIN1Q8WXD9 1431 aa23.12■■□□□ 1.29
BARD1-204ENST00000455743 CUL7Q14999 1698 aa23.1■■□□□ 1.29
BARD1-204ENST00000455743 AQRO60306 1485 aaKnown RBP eCLIP23.09■■□□□ 1.29
BARD1-204ENST00000455743 WDR97A6NE52 1622 aa23.08■■□□□ 1.28
BARD1-204ENST00000455743 CTTNBP2Q8WZ74 1663 aa23.07■■□□□ 1.28
BARD1-204ENST00000455743 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.04■■□□□ 1.28
BARD1-204ENST00000455743 KCNH8Q96L42 1107 aa23.02■■□□□ 1.28
BARD1-204ENST00000455743 TIMELESSQ9UNS1 1208 aa23.02■■□□□ 1.28
BARD1-204ENST00000455743 SUPT16HQ9Y5B9 1047 aaKnown RBP23.02■■□□□ 1.28
BARD1-204ENST00000455743 FMN1Q68DA7 1419 aa23.01■■□□□ 1.27
BARD1-204ENST00000455743 DDX10Q13206 875 aaKnown RBP22.98■■□□□ 1.27
BARD1-204ENST00000455743 URB2Q14146 1524 aaKnown RBP22.97■■□□□ 1.27
BARD1-204ENST00000455743 SNAPC4Q5SXM2 1469 aa22.97■■□□□ 1.27
BARD1-204ENST00000455743 FGD6Q6ZV73 1430 aa22.97■■□□□ 1.27
BARD1-204ENST00000455743 PPP1R15AO75807 674 aaPredicted RBP22.95■■□□□ 1.26
BARD1-204ENST00000455743 TDRD9Q8NDG6 1382 aaKnown RBP22.94■■□□□ 1.26
BARD1-204ENST00000455743 MTUS2Q5JR59 1369 aa22.93■■□□□ 1.26
BARD1-204ENST00000455743 LAMC3Q9Y6N6 1575 aa22.92■■□□□ 1.26
BARD1-204ENST00000455743 SAMD9Q5K651 1589 aa22.89■■□□□ 1.26
BARD1-204ENST00000455743 ABCA5Q8WWZ7 1642 aa22.89■■□□□ 1.25
BARD1-204ENST00000455743 HIRIP3Q9BW71 556 aaPredicted RBP22.88■■□□□ 1.25
BARD1-204ENST00000455743 PTPRKQ15262 1439 aa22.88■■□□□ 1.25
BARD1-204ENST00000455743 GAPVD1Q14C86 1478 aa22.88■■□□□ 1.25
BARD1-204ENST00000455743 LRRIQ1Q96JM4 1722 aa22.87■■□□□ 1.25
BARD1-204ENST00000455743 CCDC18Q5T9S5 1454 aa22.86■■□□□ 1.25
BARD1-204ENST00000455743 GRIN2BQ13224 1484 aa22.84■■□□□ 1.25
BARD1-204ENST00000455743 HFM1A2PYH4 1435 aa22.84■■□□□ 1.25
BARD1-204ENST00000455743 NCOA2Q15596 1464 aa22.83■■□□□ 1.24
BARD1-204ENST00000455743 PTPN23Q9H3S7 1636 aa22.81■■□□□ 1.24
BARD1-204ENST00000455743 MYOM3Q5VTT5 1437 aa22.81■■□□□ 1.24
BARD1-204ENST00000455743 UACAQ9BZF9 1416 aa22.81■■□□□ 1.24
BARD1-204ENST00000455743 TONSLQ96HA7 1378 aa22.81■■□□□ 1.24
BARD1-204ENST00000455743 MYT1Q01538 1121 aa22.8■■□□□ 1.24
BARD1-204ENST00000455743 PDS5BQ9NTI5 1447 aa22.79■■□□□ 1.24
BARD1-204ENST00000455743 NAIPQ13075 1403 aa22.78■■□□□ 1.24
BARD1-204ENST00000455743 SUPT6HQ7KZ85 1726 aaKnown RBP22.77■■□□□ 1.24
BARD1-204ENST00000455743 THOC2Q8NI27 1593 aaKnown RBP22.77■■□□□ 1.24
BARD1-204ENST00000455743 EHBP1L1Q8N3D4 1523 aa22.74■■□□□ 1.23
BARD1-204ENST00000455743 CCER2I3L3R5 266 aa22.73■■□□□ 1.23
BARD1-204ENST00000455743 ANP32CO43423 234 aa22.73■■□□□ 1.23
BARD1-204ENST00000455743 UGGT2Q9NYU1 1516 aa22.71■■□□□ 1.23
BARD1-204ENST00000455743 KIF21AQ7Z4S6 1674 aa22.7■■□□□ 1.23
BARD1-204ENST00000455743 MAGI3Q5TCQ9 1506 aa22.7■■□□□ 1.22
BARD1-204ENST00000455743 TARBP1Q13395 1621 aaKnown RBP22.69■■□□□ 1.22
BARD1-204ENST00000455743 ARHGEF11O15085 1522 aa22.68■■□□□ 1.22
BARD1-204ENST00000455743 RRP7BPQ9NSQ0 103 aa22.65■■□□□ 1.22
BARD1-204ENST00000455743 TSHZ2Q9NRE2 1034 aa22.65■■□□□ 1.22
BARD1-204ENST00000455743 CHIC2Q9UKJ5 165 aa22.64■■□□□ 1.22
BARD1-204ENST00000455743 FKBP8Q14318 412 aa22.63■■□□□ 1.21
BARD1-204ENST00000455743 TCOF1Q13428 1488 aaKnown RBP22.62■■□□□ 1.21
BARD1-204ENST00000455743 KDM5BQ9UGL1 1544 aa22.62■■□□□ 1.21
BARD1-204ENST00000455743 TRIM52Q96A61 297 aa22.61■■□□□ 1.21
BARD1-204ENST00000455743 BCANQ96GW7 911 aa22.61■■□□□ 1.21
BARD1-204ENST00000455743 HECW1Q76N89 1606 aa22.61■■□□□ 1.21
BARD1-204ENST00000455743 PBRM1Q86U86 1689 aa22.59■■□□□ 1.21
BARD1-204ENST00000455743 EPRSP07814 1512 aaKnown RBP22.58■■□□□ 1.21
BARD1-204ENST00000455743 IQGAP2Q13576 1575 aa22.57■■□□□ 1.2
BARD1-204ENST00000455743 GCC2Q8IWJ2 1684 aa22.56■■□□□ 1.2
BARD1-204ENST00000455743 DENND4BO75064 1496 aaPredicted RBP22.55■■□□□ 1.2
BARD1-204ENST00000455743 ERCC6Q03468 1493 aa22.55■■□□□ 1.2
BARD1-204ENST00000455743 CDK13Q14004 1512 aaKnown RBP22.53■■□□□ 1.2
BARD1-204ENST00000455743 KDM6BO15054 1643 aa22.53■■□□□ 1.2
BARD1-204ENST00000455743 ARID3CA6NKF2 412 aa22.52■■□□□ 1.2
BARD1-204ENST00000455743 AKNAQ7Z591 1439 aa22.51■■□□□ 1.19
BARD1-204ENST00000455743 ADAMTS12P58397 1594 aa22.51■■□□□ 1.19
BARD1-204ENST00000455743 MIA2Q96PC5 1412 aa22.51■■□□□ 1.19
BARD1-204ENST00000455743 NEFLP07196 543 aa22.5■■□□□ 1.19
BARD1-204ENST00000455743 HSPA5P11021 654 aaKnown RBP22.49■■□□□ 1.19
BARD1-204ENST00000455743 MPHOSPH9Q99550 1183 aa22.49■■□□□ 1.19
BARD1-204ENST00000455743 WDR62O43379 1518 aa22.49■■□□□ 1.19
BARD1-204ENST00000455743 WASHC2AQ641Q2 1341 aa22.46■■□□□ 1.19
BARD1-204ENST00000455743 FOXD1Q16676 465 aa22.43■■□□□ 1.18
BARD1-204ENST00000455743 EIF4G2P78344 907 aaKnown RBP eCLIP22.42■■□□□ 1.18
BARD1-204ENST00000455743 MRC2Q9UBG0 1479 aa22.42■■□□□ 1.18
BARD1-204ENST00000455743 L3MBTL2Q969R5 705 aa22.42■■□□□ 1.18
BARD1-204ENST00000455743 DAPK1P53355 1430 aa22.37■■□□□ 1.17
BARD1-204ENST00000455743 HNRNPUQ00839 825 aaKnown RBP eCLIP22.37■■□□□ 1.17
BARD1-204ENST00000455743 ZNF608Q9ULD9 1512 aaPredicted RBP22.36■■□□□ 1.17
BARD1-204ENST00000455743 ROCK1Q13464 1354 aa22.35■■□□□ 1.17
BARD1-204ENST00000455743 ZNF644Q9H582 1327 aaPredicted RBP22.34■■□□□ 1.17
BARD1-204ENST00000455743 ABCC5O15440 1437 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms