RNA–Protein interactions for RNA: ENST00000454257.5

CCDC148-207, Transcript of coiled-coil domain containing 148, humanhuman

TSL 2

Gene CCDC148, Length 2,075 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-207ENST00000454257 TOPBP1Q92547 1522 aa14.49□□□□□ -0.09
CCDC148-207ENST00000454257 MIER1Q8N108 512 aa14.49□□□□□ -0.09
CCDC148-207ENST00000454257 CLSPNQ9HAW4 1339 aa14.46□□□□□ -0.09
CCDC148-207ENST00000454257 ARAP1Q96P48 1450 aa14.46□□□□□ -0.1
CCDC148-207ENST00000454257 MSH5O43196 834 aa14.45□□□□□ -0.1
CCDC148-207ENST00000454257 POTEDQ86YR6 584 aa14.45□□□□□ -0.1
CCDC148-207ENST00000454257 KIF27Q86VH2 1401 aa14.44□□□□□ -0.1
CCDC148-207ENST00000454257 IFT140Q96RY7 1462 aa14.44□□□□□ -0.1
CCDC148-207ENST00000454257 DNMBPQ6XZF7 1577 aa14.43□□□□□ -0.1
CCDC148-207ENST00000454257 CUX1P39880 1505 aa14.42□□□□□ -0.1
CCDC148-207ENST00000454257 DHX57Q6P158 1386 aaKnown RBP14.41□□□□□ -0.1
CCDC148-207ENST00000454257 ZNF608Q9ULD9 1512 aaPredicted RBP14.4□□□□□ -0.1
CCDC148-207ENST00000454257 KANK4Q5T7N3 995 aaPredicted RBP14.39□□□□□ -0.11
CCDC148-207ENST00000454257 POLA1P09884 1462 aaPredicted RBP14.37□□□□□ -0.11
CCDC148-207ENST00000454257 OSCARQ8IYS5 282 aa14.37□□□□□ -0.11
CCDC148-207ENST00000454257 RRBP1Q9P2E9 1410 aaKnown RBP14.37□□□□□ -0.11
CCDC148-207ENST00000454257 AQRO60306 1485 aaKnown RBP eCLIP14.34□□□□□ -0.11
CCDC148-207ENST00000454257 RAD54L2Q9Y4B4 1467 aa14.34□□□□□ -0.11
CCDC148-207ENST00000454257 TDRD9Q8NDG6 1382 aaKnown RBP14.32□□□□□ -0.12
CCDC148-207ENST00000454257 FGD5Q6ZNL6 1462 aa14.31□□□□□ -0.12
CCDC148-207ENST00000454257 ARHGAP35Q9NRY4 1499 aa14.31□□□□□ -0.12
CCDC148-207ENST00000454257 CCNB3Q8WWL7 1395 aa14.31□□□□□ -0.12
CCDC148-207ENST00000454257 TARBP1Q13395 1621 aaKnown RBP14.3□□□□□ -0.12
CCDC148-207ENST00000454257 EIF4G3O43432 1585 aaKnown RBP14.26□□□□□ -0.13
CCDC148-207ENST00000454257 FBLN2P98095 1184 aa14.26□□□□□ -0.13
CCDC148-207ENST00000454257 ITGAEP38570 1179 aa14.25□□□□□ -0.13
CCDC148-207ENST00000454257 IGF1RP08069 1367 aa14.23□□□□□ -0.13
CCDC148-207ENST00000454257 MYT1Q01538 1121 aa14.22□□□□□ -0.13
CCDC148-207ENST00000454257 MAP3K1Q13233 1512 aa14.2□□□□□ -0.14
CCDC148-207ENST00000454257 CARMIL1Q5VZK9 1371 aa14.2□□□□□ -0.14
CCDC148-207ENST00000454257 TIAM1Q13009 1591 aa14.2□□□□□ -0.14
CCDC148-207ENST00000454257 RAB3GAP2Q9H2M9 1393 aa14.19□□□□□ -0.14
CCDC148-207ENST00000454257 CHMP7Q8WUX9 453 aaPredicted RBP14.18□□□□□ -0.14
CCDC148-207ENST00000454257 GRIN2BQ13224 1484 aa14.17□□□□□ -0.14
CCDC148-207ENST00000454257 ABCA10Q8WWZ4 1543 aa14.16□□□□□ -0.14
CCDC148-207ENST00000454257 GAPVD1Q14C86 1478 aa14.15□□□□□ -0.14
CCDC148-207ENST00000454257 SNAPC4Q5SXM2 1469 aa14.15□□□□□ -0.14
CCDC148-207ENST00000454257 LRRC9Q6ZRR7 1453 aa14.15□□□□□ -0.14
CCDC148-207ENST00000454257 FHAD1B1AJZ9 1412 aa14.15□□□□□ -0.14
CCDC148-207ENST00000454257 WDR97A6NE52 1622 aa14.14□□□□□ -0.15
CCDC148-207ENST00000454257 SETD5Q9C0A6 1442 aa14.13□□□□□ -0.15
CCDC148-207ENST00000454257 MAPKBP1O60336 1514 aa14.12□□□□□ -0.15
CCDC148-207ENST00000454257 MAGI1Q96QZ7 1491 aaPredicted RBP14.11□□□□□ -0.15
CCDC148-207ENST00000454257 FAM50AQ14320 339 aaKnown RBP14.11□□□□□ -0.15
CCDC148-207ENST00000454257 PHLDB1Q86UU1 1377 aa14.11□□□□□ -0.15
CCDC148-207ENST00000454257 SUPT16HQ9Y5B9 1047 aaKnown RBP14.08□□□□□ -0.15
CCDC148-207ENST00000454257 ATP1B4Q9UN42 357 aaPredicted RBP14.08□□□□□ -0.16
CCDC148-207ENST00000454257 SYNJ2O15056 1496 aa14.08□□□□□ -0.16
CCDC148-207ENST00000454257 CHD1O14646 1710 aa14.07□□□□□ -0.16
CCDC148-207ENST00000454257 CFAP43Q8NDM7 1665 aa14.07□□□□□ -0.16
CCDC148-207ENST00000454257 PCF11O94913 1555 aaKnown RBP14.07□□□□□ -0.16
CCDC148-207ENST00000454257 P3H3Q8IVL6 736 aa14.06□□□□□ -0.16
CCDC148-207ENST00000454257 ABCA5Q8WWZ7 1642 aa14.06□□□□□ -0.16
CCDC148-207ENST00000454257 ARHGEF11O15085 1522 aa14.03□□□□□ -0.16
CCDC148-207ENST00000454257 CYB5RLQ6IPT4 315 aa14.03□□□□□ -0.16
CCDC148-207ENST00000454257 TIMELESSQ9UNS1 1208 aa14.03□□□□□ -0.16
CCDC148-207ENST00000454257 FYCO1Q9BQS8 1478 aa14.03□□□□□ -0.16
CCDC148-207ENST00000454257 FHOD3Q2V2M9 1422 aa14.02□□□□□ -0.16
CCDC148-207ENST00000454257 EFCAB5A4FU69 1503 aa14.02□□□□□ -0.17
CCDC148-207ENST00000454257 SIN3AQ96ST3 1273 aa14.02□□□□□ -0.17
CCDC148-207ENST00000454257 RIMBP3CA6NJZ7 1639 aa14.01□□□□□ -0.17
CCDC148-207ENST00000454257 RIMBP3BA6NNM3 1639 aa14.01□□□□□ -0.17
CCDC148-207ENST00000454257 RIMBP3Q9UFD9 1639 aa14.01□□□□□ -0.17
CCDC148-207ENST00000454257 PBRM1Q86U86 1689 aa14.01□□□□□ -0.17
CCDC148-207ENST00000454257 CASKIN1Q8WXD9 1431 aa14□□□□□ -0.17
CCDC148-207ENST00000454257 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.99□□□□□ -0.17
CCDC148-207ENST00000454257 DDX10Q13206 875 aaKnown RBP13.98□□□□□ -0.17
CCDC148-207ENST00000454257 KCNH8Q96L42 1107 aa13.97□□□□□ -0.17
CCDC148-207ENST00000454257 GRIN2AQ12879 1464 aa13.96□□□□□ -0.17
CCDC148-207ENST00000454257 CLASP1Q7Z460 1538 aa13.96□□□□□ -0.17
CCDC148-207ENST00000454257 CUL7Q14999 1698 aa13.96□□□□□ -0.17
CCDC148-207ENST00000454257 FMN1Q68DA7 1419 aa13.95□□□□□ -0.18
CCDC148-207ENST00000454257 ADAMTS12P58397 1594 aa13.94□□□□□ -0.18
CCDC148-207ENST00000454257 PPP1R15AO75807 674 aaPredicted RBP13.93□□□□□ -0.18
CCDC148-207ENST00000454257 FGD6Q6ZV73 1430 aa13.93□□□□□ -0.18
CCDC148-207ENST00000454257 CTTNBP2Q8WZ74 1663 aa13.92□□□□□ -0.18
CCDC148-207ENST00000454257 MTUS2Q5JR59 1369 aa13.91□□□□□ -0.18
CCDC148-207ENST00000454257 NUP160Q12769 1436 aa13.91□□□□□ -0.18
CCDC148-207ENST00000454257 TONSLQ96HA7 1378 aa13.9□□□□□ -0.18
CCDC148-207ENST00000454257 ANP32CO43423 234 aa13.89□□□□□ -0.19
CCDC148-207ENST00000454257 CCDC18Q5T9S5 1454 aa13.88□□□□□ -0.19
CCDC148-207ENST00000454257 CCER2I3L3R5 266 aa13.87□□□□□ -0.19
CCDC148-207ENST00000454257 HIRIP3Q9BW71 556 aaPredicted RBP13.87□□□□□ -0.19
CCDC148-207ENST00000454257 CEP170Q5SW79 1584 aa13.87□□□□□ -0.19
CCDC148-207ENST00000454257 HFM1A2PYH4 1435 aa13.87□□□□□ -0.19
CCDC148-207ENST00000454257 JPH4Q96JJ6 628 aa13.86□□□□□ -0.19
CCDC148-207ENST00000454257 TSHZ2Q9NRE2 1034 aa13.86□□□□□ -0.19
CCDC148-207ENST00000454257 UACAQ9BZF9 1416 aa13.86□□□□□ -0.19
CCDC148-207ENST00000454257 FKBP8Q14318 412 aa13.84□□□□□ -0.19
CCDC148-207ENST00000454257 NEFLP07196 543 aa13.83□□□□□ -0.2
CCDC148-207ENST00000454257 PTPN23Q9H3S7 1636 aa13.83□□□□□ -0.2
CCDC148-207ENST00000454257 MYOM3Q5VTT5 1437 aa13.83□□□□□ -0.2
CCDC148-207ENST00000454257 NCOA2Q15596 1464 aa13.83□□□□□ -0.2
CCDC148-207ENST00000454257 BCANQ96GW7 911 aa13.83□□□□□ -0.2
CCDC148-207ENST00000454257 SAMD9Q5K651 1589 aa13.82□□□□□ -0.2
CCDC148-207ENST00000454257 PTPRKQ15262 1439 aa13.82□□□□□ -0.2
CCDC148-207ENST00000454257 PRG4Q92954 1404 aaPredicted RBP13.8□□□□□ -0.2
CCDC148-207ENST00000454257 NAIPQ13075 1403 aa13.8□□□□□ -0.2
CCDC148-207ENST00000454257 EHBP1L1Q8N3D4 1523 aa13.8□□□□□ -0.2
CCDC148-207ENST00000454257 ERCC6L2Q5T890 1561 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms