RNA–Protein interactions for RNA: ENST00000452974.1

LCT-202, Transcript of lactase, humanhuman

TSL 1 (best)

Gene LCT, Length 3,508 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCT-202ENST00000452974 VPS8Q8N3P4 1428 aa9.86□□□□□ -0.83
LCT-202ENST00000452974 POLA1P09884 1462 aaPredicted RBP9.86□□□□□ -0.83
LCT-202ENST00000452974 PRXQ9BXM0 1461 aa9.85□□□□□ -0.83
LCT-202ENST00000452974 ANP32EQ9BTT0 268 aa9.83□□□□□ -0.84
LCT-202ENST00000452974 AQRO60306 1485 aaKnown RBP eCLIP9.83□□□□□ -0.84
LCT-202ENST00000452974 URB2Q14146 1524 aaKnown RBP9.81□□□□□ -0.84
LCT-202ENST00000452974 KIF21BO75037 1637 aa9.8□□□□□ -0.84
LCT-202ENST00000452974 GAPVD1Q14C86 1478 aa9.8□□□□□ -0.84
LCT-202ENST00000452974 RTN4Q9NQC3 1192 aaKnown RBP9.79□□□□□ -0.84
LCT-202ENST00000452974 BIVM-ERCC5R4GMW8 1640 aa9.79□□□□□ -0.84
LCT-202ENST00000452974 FHOD3Q2V2M9 1422 aa9.79□□□□□ -0.84
LCT-202ENST00000452974 LAMC3Q9Y6N6 1575 aa9.79□□□□□ -0.84
LCT-202ENST00000452974 DNMBPQ6XZF7 1577 aa9.78□□□□□ -0.84
LCT-202ENST00000452974 ARAP1Q96P48 1450 aa9.77□□□□□ -0.84
LCT-202ENST00000452974 THOC2Q8NI27 1593 aaKnown RBP9.74□□□□□ -0.85
LCT-202ENST00000452974 MTUS2Q5JR59 1369 aa9.74□□□□□ -0.85
LCT-202ENST00000452974 ARHGAP35Q9NRY4 1499 aa9.74□□□□□ -0.85
LCT-202ENST00000452974 ERICH3Q5RHP9 1530 aa9.74□□□□□ -0.85
LCT-202ENST00000452974 ABCA10Q8WWZ4 1543 aa9.74□□□□□ -0.85
LCT-202ENST00000452974 MRC2Q9UBG0 1479 aa9.73□□□□□ -0.85
LCT-202ENST00000452974 PHF23Q9BUL5 403 aaPredicted RBP9.73□□□□□ -0.85
LCT-202ENST00000452974 CHIC2Q9UKJ5 165 aa9.71□□□□□ -0.86
LCT-202ENST00000452974 ZNF777Q9ULD5 760 aaPredicted RBP9.7□□□□□ -0.86
LCT-202ENST00000452974 FHAD1B1AJZ9 1412 aa9.7□□□□□ -0.86
LCT-202ENST00000452974 ZNF608Q9ULD9 1512 aaPredicted RBP9.7□□□□□ -0.86
LCT-202ENST00000452974 CCNB3Q8WWL7 1395 aa9.67□□□□□ -0.86
LCT-202ENST00000452974 TRIM52Q96A61 297 aa9.66□□□□□ -0.86
LCT-202ENST00000452974 CDK11AQ9UQ88 783 aaPredicted RBP9.66□□□□□ -0.86
LCT-202ENST00000452974 KIF21AQ7Z4S6 1674 aa9.66□□□□□ -0.86
LCT-202ENST00000452974 JPH4Q96JJ6 628 aa9.65□□□□□ -0.86
LCT-202ENST00000452974 GRIN2BQ13224 1484 aa9.65□□□□□ -0.86
LCT-202ENST00000452974 FMN1Q68DA7 1419 aa9.64□□□□□ -0.87
LCT-202ENST00000452974 RRP7BPQ9NSQ0 103 aa9.64□□□□□ -0.87
LCT-202ENST00000452974 IFT140Q96RY7 1462 aa9.63□□□□□ -0.87
LCT-202ENST00000452974 SNAPC4Q5SXM2 1469 aa9.61□□□□□ -0.87
LCT-202ENST00000452974 PRDM2Q13029 1718 aa9.6□□□□□ -0.87
LCT-202ENST00000452974 PHLDB1Q86UU1 1377 aa9.6□□□□□ -0.87
LCT-202ENST00000452974 DIEXFQ68CQ4 756 aaKnown RBP9.6□□□□□ -0.87
LCT-202ENST00000452974 KCNH8Q96L42 1107 aa9.6□□□□□ -0.87
LCT-202ENST00000452974 EIF5BO60841 1220 aaKnown RBP9.59□□□□□ -0.88
LCT-202ENST00000452974 MYT1LQ9UL68 1186 aa9.59□□□□□ -0.88
LCT-202ENST00000452974 PLEKHD1A6NEE1 506 aa9.58□□□□□ -0.88
LCT-202ENST00000452974 DAXXQ9UER7 740 aaPredicted RBP9.57□□□□□ -0.88
LCT-202ENST00000452974 YTHDC1Q96MU7 727 aaKnown RBP9.57□□□□□ -0.88
LCT-202ENST00000452974 LRRC9Q6ZRR7 1453 aa9.56□□□□□ -0.88
LCT-202ENST00000452974 SIN3AQ96ST3 1273 aa9.56□□□□□ -0.88
LCT-202ENST00000452974 CFDP1Q9UEE9 299 aaPredicted RBP9.56□□□□□ -0.88
LCT-202ENST00000452974 ZNF316A6NFI3 1004 aaPredicted RBP9.55□□□□□ -0.88
LCT-202ENST00000452974 CASKIN1Q8WXD9 1431 aa9.55□□□□□ -0.88
LCT-202ENST00000452974 ANO8Q9HCE9 1232 aaPredicted RBP9.55□□□□□ -0.88
LCT-202ENST00000452974 RAB3GAP2Q9H2M9 1393 aa9.54□□□□□ -0.88
LCT-202ENST00000452974 KCNA4P22459 653 aa9.54□□□□□ -0.88
LCT-202ENST00000452974 CARMIL2Q6F5E8 1435 aa9.54□□□□□ -0.88
LCT-202ENST00000452974 CUL7Q14999 1698 aa9.54□□□□□ -0.88
LCT-202ENST00000452974 PCF11O94913 1555 aaKnown RBP9.51□□□□□ -0.89
LCT-202ENST00000452974 ZNF644Q9H582 1327 aaPredicted RBP9.51□□□□□ -0.89
LCT-202ENST00000452974 GRIN2AQ12879 1464 aa9.51□□□□□ -0.89
LCT-202ENST00000452974 TARBP1Q13395 1621 aaKnown RBP9.51□□□□□ -0.89
LCT-202ENST00000452974 HIRIP3Q9BW71 556 aaPredicted RBP9.51□□□□□ -0.89
LCT-202ENST00000452974 EFCAB5A4FU69 1503 aa9.5□□□□□ -0.89
LCT-202ENST00000452974 TIAM1Q13009 1591 aa9.5□□□□□ -0.89
LCT-202ENST00000452974 ABCA5Q8WWZ7 1642 aa9.5□□□□□ -0.89
LCT-202ENST00000452974 WDR62O43379 1518 aa9.5□□□□□ -0.89
LCT-202ENST00000452974 FYCO1Q9BQS8 1478 aa9.5□□□□□ -0.89
LCT-202ENST00000452974 SETD5Q9C0A6 1442 aa9.5□□□□□ -0.89
LCT-202ENST00000452974 NCBP3Q53F19 620 aaKnown RBP9.5□□□□□ -0.89
LCT-202ENST00000452974 KIAA0586Q9BVV6 1533 aa9.5□□□□□ -0.89
LCT-202ENST00000452974 UBE2Q2Q8WVN8 375 aa9.49□□□□□ -0.89
LCT-202ENST00000452974 RRBP1Q9P2E9 1410 aaKnown RBP9.49□□□□□ -0.89
LCT-202ENST00000452974 DHX57Q6P158 1386 aaKnown RBP9.49□□□□□ -0.89
LCT-202ENST00000452974 IQGAP2Q13576 1575 aa9.49□□□□□ -0.89
LCT-202ENST00000452974 PTPRGP23470 1445 aa9.49□□□□□ -0.89
LCT-202ENST00000452974 ZNF326Q5BKZ1 582 aaKnown RBP9.48□□□□□ -0.89
LCT-202ENST00000452974 SYNJ2O15056 1496 aa9.48□□□□□ -0.89
LCT-202ENST00000452974 FOXD1Q16676 465 aa9.48□□□□□ -0.89
LCT-202ENST00000452974 TSPY4P0CV99 314 aa9.47□□□□□ -0.89
LCT-202ENST00000452974 TSPY10P0CW01 314 aa9.47□□□□□ -0.89
LCT-202ENST00000452974 CDK13Q14004 1512 aaKnown RBP9.47□□□□□ -0.89
LCT-202ENST00000452974 FGD6Q6ZV73 1430 aa9.47□□□□□ -0.89
LCT-202ENST00000452974 NCOA2Q15596 1464 aa9.46□□□□□ -0.89
LCT-202ENST00000452974 PRG4Q92954 1404 aaPredicted RBP9.46□□□□□ -0.89
LCT-202ENST00000452974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.45□□□□□ -0.9
LCT-202ENST00000452974 PLB1Q6P1J6 1458 aa9.45□□□□□ -0.9
LCT-202ENST00000452974 MAGI1Q96QZ7 1491 aaPredicted RBP9.45□□□□□ -0.9
LCT-202ENST00000452974 EIF4G3O43432 1585 aaKnown RBP9.45□□□□□ -0.9
LCT-202ENST00000452974 CNGB1Q14028 1251 aaPredicted RBP9.45□□□□□ -0.9
LCT-202ENST00000452974 SLC4A1APQ9BWU0 796 aaKnown RBP9.45□□□□□ -0.9
LCT-202ENST00000452974 TSHZ2Q9NRE2 1034 aa9.45□□□□□ -0.9
LCT-202ENST00000452974 ADAMTS12P58397 1594 aa9.45□□□□□ -0.9
LCT-202ENST00000452974 TONSLQ96HA7 1378 aa9.44□□□□□ -0.9
LCT-202ENST00000452974 POLR3GLQ9BT43 218 aa9.44□□□□□ -0.9
LCT-202ENST00000452974 NPM1P06748 294 aaKnown RBP eCLIP9.44□□□□□ -0.9
LCT-202ENST00000452974 MYOM3Q5VTT5 1437 aa9.44□□□□□ -0.9
LCT-202ENST00000452974 HNRNPMP52272 730 aaKnown RBP eCLIP9.43□□□□□ -0.9
LCT-202ENST00000452974 CCDC18Q5T9S5 1454 aa9.43□□□□□ -0.9
LCT-202ENST00000452974 EPRSP07814 1512 aaKnown RBP9.43□□□□□ -0.9
LCT-202ENST00000452974 AMER1Q5JTC6 1135 aaPredicted RBP9.41□□□□□ -0.9
LCT-202ENST00000452974 CLSPNQ9HAW4 1339 aa9.41□□□□□ -0.9
LCT-202ENST00000452974 CTTNBP2Q8WZ74 1663 aa9.4□□□□□ -0.9
LCT-202ENST00000452974 PBRM1Q86U86 1689 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms