RNA–Protein interactions for RNA: ENST00000451343.4

TNXB-203, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 3,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-203ENST00000451343 IGF1RP08069 1367 aa16.69■□□□□ 0.26
TNXB-203ENST00000451343 RAB3GAP2Q9H2M9 1393 aa16.67■□□□□ 0.26
TNXB-203ENST00000451343 ATP1B4Q9UN42 357 aaPredicted RBP16.67■□□□□ 0.26
TNXB-203ENST00000451343 LAMC3Q9Y6N6 1575 aa16.65■□□□□ 0.26
TNXB-203ENST00000451343 DAXXQ9UER7 740 aaPredicted RBP16.65■□□□□ 0.26
TNXB-203ENST00000451343 KCNH8Q96L42 1107 aa16.64■□□□□ 0.25
TNXB-203ENST00000451343 FGD5Q6ZNL6 1462 aa16.64■□□□□ 0.25
TNXB-203ENST00000451343 CARMIL1Q5VZK9 1371 aa16.63■□□□□ 0.25
TNXB-203ENST00000451343 FAM50AQ14320 339 aaKnown RBP16.63■□□□□ 0.25
TNXB-203ENST00000451343 RAD54L2Q9Y4B4 1467 aa16.62■□□□□ 0.25
TNXB-203ENST00000451343 SIN3AQ96ST3 1273 aa16.61■□□□□ 0.25
TNXB-203ENST00000451343 PHLDB1Q86UU1 1377 aa16.6■□□□□ 0.25
TNXB-203ENST00000451343 TIAM1Q13009 1591 aa16.6■□□□□ 0.25
TNXB-203ENST00000451343 MAPKBP1O60336 1514 aa16.6■□□□□ 0.25
TNXB-203ENST00000451343 SUPT16HQ9Y5B9 1047 aaKnown RBP16.59■□□□□ 0.25
TNXB-203ENST00000451343 KIF21AQ7Z4S6 1674 aa16.56■□□□□ 0.24
TNXB-203ENST00000451343 LRRC9Q6ZRR7 1453 aa16.56■□□□□ 0.24
TNXB-203ENST00000451343 SETD5Q9C0A6 1442 aa16.54■□□□□ 0.24
TNXB-203ENST00000451343 HIRIP3Q9BW71 556 aaPredicted RBP16.54■□□□□ 0.24
TNXB-203ENST00000451343 TDRD9Q8NDG6 1382 aaKnown RBP16.53■□□□□ 0.24
TNXB-203ENST00000451343 FHOD3Q2V2M9 1422 aa16.52■□□□□ 0.23
TNXB-203ENST00000451343 DDX10Q13206 875 aaKnown RBP16.52■□□□□ 0.23
TNXB-203ENST00000451343 TOPBP1Q92547 1522 aa16.51■□□□□ 0.23
TNXB-203ENST00000451343 PCF11O94913 1555 aaKnown RBP16.5■□□□□ 0.23
TNXB-203ENST00000451343 WDR97A6NE52 1622 aa16.49■□□□□ 0.23
TNXB-203ENST00000451343 POLA1P09884 1462 aaPredicted RBP16.49■□□□□ 0.23
TNXB-203ENST00000451343 PDS5BQ9NTI5 1447 aa16.49■□□□□ 0.23
TNXB-203ENST00000451343 EIF5BO60841 1220 aaKnown RBP16.49■□□□□ 0.23
TNXB-203ENST00000451343 URB2Q14146 1524 aaKnown RBP16.48■□□□□ 0.23
TNXB-203ENST00000451343 DNMBPQ6XZF7 1577 aa16.47■□□□□ 0.23
TNXB-203ENST00000451343 MAP3K1Q13233 1512 aa16.47■□□□□ 0.23
TNXB-203ENST00000451343 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
TNXB-203ENST00000451343 BCANQ96GW7 911 aa16.43■□□□□ 0.22
TNXB-203ENST00000451343 CFAP43Q8NDM7 1665 aa16.41■□□□□ 0.22
TNXB-203ENST00000451343 PPP1R15AO75807 674 aaPredicted RBP16.35■□□□□ 0.21
TNXB-203ENST00000451343 TSHZ2Q9NRE2 1034 aa16.35■□□□□ 0.21
TNXB-203ENST00000451343 CASKIN1Q8WXD9 1431 aa16.34■□□□□ 0.21
TNXB-203ENST00000451343 FYCO1Q9BQS8 1478 aa16.34■□□□□ 0.21
TNXB-203ENST00000451343 ABCA10Q8WWZ4 1543 aa16.33■□□□□ 0.2
TNXB-203ENST00000451343 TRIM52Q96A61 297 aa16.32■□□□□ 0.2
TNXB-203ENST00000451343 FKBP8Q14318 412 aa16.32■□□□□ 0.2
TNXB-203ENST00000451343 AQRO60306 1485 aaKnown RBP eCLIP16.31■□□□□ 0.23e-8■■■■□ 25.5
TNXB-203ENST00000451343 ERCC6Q03468 1493 aa16.31■□□□□ 0.2
TNXB-203ENST00000451343 FGD6Q6ZV73 1430 aa16.31■□□□□ 0.2
TNXB-203ENST00000451343 PTPRKQ15262 1439 aa16.3■□□□□ 0.2
TNXB-203ENST00000451343 MTUS2Q5JR59 1369 aa16.3■□□□□ 0.2
TNXB-203ENST00000451343 MRC2Q9UBG0 1479 aa16.3■□□□□ 0.2
TNXB-203ENST00000451343 PLEKHG5O94827 1062 aa16.29■□□□□ 0.2
TNXB-203ENST00000451343 GAPVD1Q14C86 1478 aa16.28■□□□□ 0.2
TNXB-203ENST00000451343 TONSLQ96HA7 1378 aa16.28■□□□□ 0.2
TNXB-203ENST00000451343 FBLN2P98095 1184 aa16.28■□□□□ 0.2
TNXB-203ENST00000451343 TARBP1Q13395 1621 aaKnown RBP16.28■□□□□ 0.2
TNXB-203ENST00000451343 EFCAB5A4FU69 1503 aa16.28■□□□□ 0.2
TNXB-203ENST00000451343 ARID3CA6NKF2 412 aa16.28■□□□□ 0.2
TNXB-203ENST00000451343 CCDC18Q5T9S5 1454 aa16.27■□□□□ 0.2
TNXB-203ENST00000451343 THOC2Q8NI27 1593 aaKnown RBP16.27■□□□□ 0.2
TNXB-203ENST00000451343 WDR62O43379 1518 aa16.26■□□□□ 0.19
TNXB-203ENST00000451343 SNAPC4Q5SXM2 1469 aa16.25■□□□□ 0.19
TNXB-203ENST00000451343 ANP32CO43423 234 aa16.25■□□□□ 0.19
TNXB-203ENST00000451343 TIMELESSQ9UNS1 1208 aa16.25■□□□□ 0.19
TNXB-203ENST00000451343 FMN1Q68DA7 1419 aa16.24■□□□□ 0.19
TNXB-203ENST00000451343 CTTNBP2Q8WZ74 1663 aa16.24■□□□□ 0.19
TNXB-203ENST00000451343 ANP32EQ9BTT0 268 aa16.22■□□□□ 0.19
TNXB-203ENST00000451343 CHIC2Q9UKJ5 165 aa16.22■□□□□ 0.19
TNXB-203ENST00000451343 CUL7Q14999 1698 aa16.22■□□□□ 0.19
TNXB-203ENST00000451343 ABCA5Q8WWZ7 1642 aa16.22■□□□□ 0.19
TNXB-203ENST00000451343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.22■□□□□ 0.19
TNXB-203ENST00000451343 RRP7BPQ9NSQ0 103 aa16.21■□□□□ 0.19
TNXB-203ENST00000451343 NCOA2Q15596 1464 aa16.2■□□□□ 0.18
TNXB-203ENST00000451343 ZNF608Q9ULD9 1512 aaPredicted RBP16.2■□□□□ 0.18
TNXB-203ENST00000451343 HFM1A2PYH4 1435 aa16.19■□□□□ 0.18
TNXB-203ENST00000451343 LRRIQ1Q96JM4 1722 aa16.19■□□□□ 0.18
TNXB-203ENST00000451343 PTPN23Q9H3S7 1636 aa16.19■□□□□ 0.18
TNXB-203ENST00000451343 NAIPQ13075 1403 aa16.18■□□□□ 0.18
TNXB-203ENST00000451343 UACAQ9BZF9 1416 aa16.18■□□□□ 0.18
TNXB-203ENST00000451343 CCER2I3L3R5 266 aa16.17■□□□□ 0.18
TNXB-203ENST00000451343 MYOM3Q5VTT5 1437 aa16.16■□□□□ 0.18
TNXB-203ENST00000451343 NEFLP07196 543 aa16.15■□□□□ 0.18
TNXB-203ENST00000451343 GRIN2BQ13224 1484 aa16.14■□□□□ 0.17
TNXB-203ENST00000451343 SAMD9Q5K651 1589 aa16.13■□□□□ 0.17
TNXB-203ENST00000451343 MAGI3Q5TCQ9 1506 aa16.12■□□□□ 0.17
TNXB-203ENST00000451343 ANO8Q9HCE9 1232 aaPredicted RBP16.12■□□□□ 0.17
TNXB-203ENST00000451343 FOXD1Q16676 465 aa16.11■□□□□ 0.17
TNXB-203ENST00000451343 KDM5BQ9UGL1 1544 aa16.1■□□□□ 0.17
TNXB-203ENST00000451343 PBRM1Q86U86 1689 aa16.1■□□□□ 0.17
TNXB-203ENST00000451343 CHMP7Q8WUX9 453 aaPredicted RBP16.1■□□□□ 0.17
TNXB-203ENST00000451343 IRX6P78412 446 aaPredicted RBP16.09■□□□□ 0.17
TNXB-203ENST00000451343 HSPA5P11021 654 aaKnown RBP16.08■□□□□ 0.17
TNXB-203ENST00000451343 HNRNPUQ00839 825 aaKnown RBP eCLIP16.08■□□□□ 0.17
TNXB-203ENST00000451343 SUPT6HQ7KZ85 1726 aaKnown RBP16.08■□□□□ 0.17
TNXB-203ENST00000451343 IFT140Q96RY7 1462 aa16.08■□□□□ 0.17
TNXB-203ENST00000451343 EHBP1L1Q8N3D4 1523 aa16.07■□□□□ 0.16
TNXB-203ENST00000451343 WASHC2AQ641Q2 1341 aa16.07■□□□□ 0.16
TNXB-203ENST00000451343 UGGT2Q9NYU1 1516 aa16.06■□□□□ 0.16
TNXB-203ENST00000451343 KDM6BO15054 1643 aa16.05■□□□□ 0.16
TNXB-203ENST00000451343 DENND4BO75064 1496 aaPredicted RBP16.05■□□□□ 0.16
TNXB-203ENST00000451343 CDK13Q14004 1512 aaKnown RBP16.03■□□□□ 0.16
TNXB-203ENST00000451343 EIF4G3O43432 1585 aaKnown RBP16.03■□□□□ 0.16
TNXB-203ENST00000451343 CCDC184Q52MB2 194 aa16.03■□□□□ 0.16
TNXB-203ENST00000451343 RBM19Q9Y4C8 960 aaKnown RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms