RNA–Protein interactions for RNA: ENST00000450921.1

HMGB1P7-201, Transcript of high mobility group box 1 pseudogene 7, humanhuman

BASIC

Gene HMGB1P7, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P7-201ENST00000450921 ZBTB22O15209 634 aa11.4□□□□□ -0.58
HMGB1P7-201ENST00000450921 REM2Q8IYK8 340 aaPredicted RBP11.4□□□□□ -0.58
HMGB1P7-201ENST00000450921 TOPBP1Q92547 1522 aa11.39□□□□□ -0.59
HMGB1P7-201ENST00000450921 FXR2P51116 673 aaKnown RBP eCLIP11.37□□□□□ -0.59
HMGB1P7-201ENST00000450921 ZNF608Q9ULD9 1512 aaPredicted RBP11.36□□□□□ -0.59
HMGB1P7-201ENST00000450921 EVX2Q03828 476 aa11.36□□□□□ -0.59
HMGB1P7-201ENST00000450921 DNMBPQ6XZF7 1577 aa11.33□□□□□ -0.6
HMGB1P7-201ENST00000450921 FBLN2P98095 1184 aa11.32□□□□□ -0.6
HMGB1P7-201ENST00000450921 AQRO60306 1485 aaKnown RBP eCLIP11.31□□□□□ -0.6
HMGB1P7-201ENST00000450921 PITPNM1O00562 1244 aa11.3□□□□□ -0.6
HMGB1P7-201ENST00000450921 SOGA1O94964 1423 aa11.29□□□□□ -0.6
HMGB1P7-201ENST00000450921 LHX8Q68G74 356 aa11.28□□□□□ -0.6
HMGB1P7-201ENST00000450921 POLA1P09884 1462 aaPredicted RBP11.27□□□□□ -0.6
HMGB1P7-201ENST00000450921 CYB5RLQ6IPT4 315 aa11.27□□□□□ -0.61
HMGB1P7-201ENST00000450921 EIF4G3O43432 1585 aaKnown RBP11.26□□□□□ -0.61
HMGB1P7-201ENST00000450921 SUPT5HO00267 1087 aaKnown RBP11.26□□□□□ -0.61
HMGB1P7-201ENST00000450921 TDRD9Q8NDG6 1382 aaKnown RBP11.26□□□□□ -0.61
HMGB1P7-201ENST00000450921 TARBP1Q13395 1621 aaKnown RBP11.25□□□□□ -0.61
HMGB1P7-201ENST00000450921 CHMP7Q8WUX9 453 aaPredicted RBP11.25□□□□□ -0.61
HMGB1P7-201ENST00000450921 PLSCR2Q9NRY7 297 aa11.25□□□□□ -0.61
HMGB1P7-201ENST00000450921 RAD54L2Q9Y4B4 1467 aa11.25□□□□□ -0.61
HMGB1P7-201ENST00000450921 RIMBP3CA6NJZ7 1639 aa11.24□□□□□ -0.61
HMGB1P7-201ENST00000450921 RIMBP3BA6NNM3 1639 aa11.24□□□□□ -0.61
HMGB1P7-201ENST00000450921 RIMBP3Q9UFD9 1639 aa11.24□□□□□ -0.61
HMGB1P7-201ENST00000450921 ARHGEF11O15085 1522 aa11.23□□□□□ -0.61
HMGB1P7-201ENST00000450921 FGD5Q6ZNL6 1462 aa11.2□□□□□ -0.62
HMGB1P7-201ENST00000450921 FOXD4L1Q9NU39 408 aa11.2□□□□□ -0.62
HMGB1P7-201ENST00000450921 ZBTB12Q9Y330 459 aaPredicted RBP11.2□□□□□ -0.62
HMGB1P7-201ENST00000450921 CHD1O14646 1710 aa11.18□□□□□ -0.62
HMGB1P7-201ENST00000450921 WDR97A6NE52 1622 aa11.17□□□□□ -0.62
HMGB1P7-201ENST00000450921 CUX1P39880 1505 aa11.17□□□□□ -0.62
HMGB1P7-201ENST00000450921 GRIN2BQ13224 1484 aa11.16□□□□□ -0.62
HMGB1P7-201ENST00000450921 SNAPC4Q5SXM2 1469 aa11.15□□□□□ -0.62
HMGB1P7-201ENST00000450921 MAGI1Q96QZ7 1491 aaPredicted RBP11.14□□□□□ -0.63
HMGB1P7-201ENST00000450921 GAPVD1Q14C86 1478 aa11.12□□□□□ -0.63
HMGB1P7-201ENST00000450921 MYCNP04198 464 aaPredicted RBP11.12□□□□□ -0.63
HMGB1P7-201ENST00000450921 SYNJ2O15056 1496 aa11.12□□□□□ -0.63
HMGB1P7-201ENST00000450921 ARAP1Q96P48 1450 aa11.11□□□□□ -0.63
HMGB1P7-201ENST00000450921 SYNJ1O43426 1573 aa11.11□□□□□ -0.63
HMGB1P7-201ENST00000450921 WRNQ14191 1432 aaPredicted RBP eCLIP11.09□□□□□ -0.63
HMGB1P7-201ENST00000450921 ABCA10Q8WWZ4 1543 aa11.09□□□□□ -0.63
HMGB1P7-201ENST00000450921 GABBR2O75899 941 aa11.07□□□□□ -0.64
HMGB1P7-201ENST00000450921 CLASP1Q7Z460 1538 aa11.06□□□□□ -0.64
HMGB1P7-201ENST00000450921 C19orf67A6NJJ6 358 aa11.04□□□□□ -0.64
HMGB1P7-201ENST00000450921 PBRM1Q86U86 1689 aa11.03□□□□□ -0.64
HMGB1P7-201ENST00000450921 ABCA5Q8WWZ7 1642 aa11.01□□□□□ -0.65
HMGB1P7-201ENST00000450921 TOP2BQ02880 1626 aa11□□□□□ -0.65
HMGB1P7-201ENST00000450921 PRKAR2AP13861 404 aaKnown RBP10.99□□□□□ -0.65
HMGB1P7-201ENST00000450921 FHAD1B1AJZ9 1412 aa10.99□□□□□ -0.65
HMGB1P7-201ENST00000450921 GRIN2AQ12879 1464 aa10.99□□□□□ -0.65
HMGB1P7-201ENST00000450921 BIVM-ERCC5R4GMW8 1640 aa10.97□□□□□ -0.65
HMGB1P7-201ENST00000450921 ERICH3Q5RHP9 1530 aa10.95□□□□□ -0.66
HMGB1P7-201ENST00000450921 NUP160Q12769 1436 aa10.95□□□□□ -0.66
HMGB1P7-201ENST00000450921 JPH4Q96JJ6 628 aa10.95□□□□□ -0.66
HMGB1P7-201ENST00000450921 ADAMTS12P58397 1594 aa10.93□□□□□ -0.66
HMGB1P7-201ENST00000450921 CEP170Q5SW79 1584 aa10.91□□□□□ -0.66
HMGB1P7-201ENST00000450921 NPM1P06748 294 aaKnown RBP eCLIP10.9□□□□□ -0.66
HMGB1P7-201ENST00000450921 ATF5Q9Y2D1 282 aaPredicted RBP10.9□□□□□ -0.66
HMGB1P7-201ENST00000450921 PRG4Q92954 1404 aaPredicted RBP10.89□□□□□ -0.67
HMGB1P7-201ENST00000450921 ERCC6L2Q5T890 1561 aa10.88□□□□□ -0.67
HMGB1P7-201ENST00000450921 IGF1RP08069 1367 aa10.87□□□□□ -0.67
HMGB1P7-201ENST00000450921 KIF27Q86VH2 1401 aa10.86□□□□□ -0.67
HMGB1P7-201ENST00000450921 SHROOM2Q13796 1616 aa10.86□□□□□ -0.67
HMGB1P7-201ENST00000450921 POTEIP0CG38 1075 aa10.83□□□□□ -0.68
HMGB1P7-201ENST00000450921 KIAA0586Q9BVV6 1533 aa10.81□□□□□ -0.68
HMGB1P7-201ENST00000450921 FAM69CQ0P6D2 419 aa10.81□□□□□ -0.68
HMGB1P7-201ENST00000450921 CARMIL1Q5VZK9 1371 aa10.8□□□□□ -0.68
HMGB1P7-201ENST00000450921 ATXN8OSP0DMR3 200 aa10.79□□□□□ -0.68
HMGB1P7-201ENST00000450921 SPDYE1Q8NFV5 336 aaPredicted RBP10.79□□□□□ -0.68
HMGB1P7-201ENST00000450921 CLEC11AQ9Y240 323 aa10.79□□□□□ -0.68
HMGB1P7-201ENST00000450921 SPDYE2BA6NHP3 402 aa10.78□□□□□ -0.68
HMGB1P7-201ENST00000450921 SPDYE6P0CI01 402 aa10.78□□□□□ -0.68
HMGB1P7-201ENST00000450921 SPDYE2Q495Y8 402 aa10.78□□□□□ -0.68
HMGB1P7-201ENST00000450921 RUSC2Q8N2Y8 1516 aa10.77□□□□□ -0.69
HMGB1P7-201ENST00000450921 CUL7Q14999 1698 aa10.76□□□□□ -0.69
HMGB1P7-201ENST00000450921 TTBK1Q5TCY1 1321 aaPredicted RBP10.76□□□□□ -0.69
HMGB1P7-201ENST00000450921 PTPRGP23470 1445 aa10.75□□□□□ -0.69
HMGB1P7-201ENST00000450921 CARMIL2Q6F5E8 1435 aa10.75□□□□□ -0.69
HMGB1P7-201ENST00000450921 ABCC10Q5T3U5 1492 aa10.74□□□□□ -0.69
HMGB1P7-201ENST00000450921 TNIKQ9UKE5 1360 aa10.72□□□□□ -0.69
HMGB1P7-201ENST00000450921 MAPKBP1O60336 1514 aa10.71□□□□□ -0.69
HMGB1P7-201ENST00000450921 KIF13AQ9H1H9 1805 aa10.7□□□□□ -0.7
HMGB1P7-201ENST00000450921 ADCY10Q96PN6 1610 aa10.69□□□□□ -0.7
HMGB1P7-201ENST00000450921 CHADLQ6NUI6 762 aa10.68□□□□□ -0.7
HMGB1P7-201ENST00000450921 RAPGEF2Q9Y4G8 1499 aa10.68□□□□□ -0.7
HMGB1P7-201ENST00000450921 POTEMA6NI47 508 aa10.67□□□□□ -0.7
HMGB1P7-201ENST00000450921 FAM9AQ8IZU1 332 aaPredicted RBP10.67□□□□□ -0.7
HMGB1P7-201ENST00000450921 IQGAP2Q13576 1575 aa10.66□□□□□ -0.7
HMGB1P7-201ENST00000450921 UACAQ9BZF9 1416 aa10.65□□□□□ -0.7
HMGB1P7-201ENST00000450921 DIP2BQ9P265 1576 aa10.65□□□□□ -0.71
HMGB1P7-201ENST00000450921 ABCC2Q92887 1545 aa10.64□□□□□ -0.71
HMGB1P7-201ENST00000450921 PLB1Q6P1J6 1458 aa10.63□□□□□ -0.71
HMGB1P7-201ENST00000450921 CLCN6P51797 869 aa10.63□□□□□ -0.71
HMGB1P7-201ENST00000450921 UHRF1BP1LA0JNW5 1464 aa10.62□□□□□ -0.71
HMGB1P7-201ENST00000450921 ASXL2Q76L83 1435 aa10.62□□□□□ -0.71
HMGB1P7-201ENST00000450921 POTEGQ6S5H5 508 aa10.61□□□□□ -0.71
HMGB1P7-201ENST00000450921 DISP1Q96F81 1524 aa10.61□□□□□ -0.71
HMGB1P7-201ENST00000450921 UGGT2Q9NYU1 1516 aa10.6□□□□□ -0.71
HMGB1P7-201ENST00000450921 CD44P16070 742 aaKnown RBP10.59□□□□□ -0.71
HMGB1P7-201ENST00000450921 OTUD5Q96G74 571 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms