RNA–Protein interactions for RNA: ENST00000450179.1

TMEM254-206, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-206ENST00000450179 KIF21AQ7Z4S6 1674 aa11.18□□□□□ -0.62
TMEM254-206ENST00000450179 THOC2Q8NI27 1593 aaKnown RBP11.18□□□□□ -0.62
TMEM254-206ENST00000450179 TOP2AP11388 1531 aaKnown RBP11.18□□□□□ -0.62
TMEM254-206ENST00000450179 CADPSQ9ULU8 1353 aa11.16□□□□□ -0.62
TMEM254-206ENST00000450179 ATXN8OSP0DMR3 200 aa11.13□□□□□ -0.63
TMEM254-206ENST00000450179 PDS5BQ9NTI5 1447 aa11.12□□□□□ -0.63
TMEM254-206ENST00000450179 EVX2Q03828 476 aa11.11□□□□□ -0.63
TMEM254-206ENST00000450179 HAP1P54257 671 aaPredicted RBP11.1□□□□□ -0.63
TMEM254-206ENST00000450179 CFTRP13569 1480 aa11.09□□□□□ -0.63
TMEM254-206ENST00000450179 SPDYE2BA6NHP3 402 aa11.09□□□□□ -0.63
TMEM254-206ENST00000450179 SPDYE6P0CI01 402 aa11.09□□□□□ -0.63
TMEM254-206ENST00000450179 FBLN2P98095 1184 aa11.09□□□□□ -0.63
TMEM254-206ENST00000450179 SPDYE2Q495Y8 402 aa11.09□□□□□ -0.63
TMEM254-206ENST00000450179 VSIG10Q8N0Z9 540 aa11.06□□□□□ -0.64
TMEM254-206ENST00000450179 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
TMEM254-206ENST00000450179 MRC2Q9UBG0 1479 aa11.05□□□□□ -0.64
TMEM254-206ENST00000450179 WDR62O43379 1518 aa11.04□□□□□ -0.64
TMEM254-206ENST00000450179 PRDM2Q13029 1718 aa11.04□□□□□ -0.64
TMEM254-206ENST00000450179 ARXQ96QS3 562 aa11.04□□□□□ -0.64
TMEM254-206ENST00000450179 CLEC11AQ9Y240 323 aa11.04□□□□□ -0.64
TMEM254-206ENST00000450179 CCDC88BA6NC98 1476 aa11.04□□□□□ -0.64
TMEM254-206ENST00000450179 FANCD2Q9BXW9 1451 aa11.03□□□□□ -0.64
TMEM254-206ENST00000450179 CEP164Q9UPV0 1460 aa11.02□□□□□ -0.65
TMEM254-206ENST00000450179 PRKAR2AP13861 404 aaKnown RBP11.01□□□□□ -0.65
TMEM254-206ENST00000450179 TPRNQ4KMQ1 711 aa11□□□□□ -0.65
TMEM254-206ENST00000450179 DNAJC5Q9H3Z4 198 aa10.98□□□□□ -0.65
TMEM254-206ENST00000450179 URB2Q14146 1524 aaKnown RBP10.96□□□□□ -0.65
TMEM254-206ENST00000450179 SPDYE1Q8NFV5 336 aaPredicted RBP10.96□□□□□ -0.65
TMEM254-206ENST00000450179 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
TMEM254-206ENST00000450179 SSUH2Q9Y2M2 353 aa10.93□□□□□ -0.66
TMEM254-206ENST00000450179 CHADLQ6NUI6 762 aa10.89□□□□□ -0.67
TMEM254-206ENST00000450179 TIMELESSQ9UNS1 1208 aa10.88□□□□□ -0.67
TMEM254-206ENST00000450179 ERICH6Q7L0X2 663 aa10.87□□□□□ -0.67
TMEM254-206ENST00000450179 TOPBP1Q92547 1522 aa10.86□□□□□ -0.67
TMEM254-206ENST00000450179 C19orf67A6NJJ6 358 aa10.86□□□□□ -0.67
TMEM254-206ENST00000450179 DNMBPQ6XZF7 1577 aa10.84□□□□□ -0.67
TMEM254-206ENST00000450179 ABCC8Q09428 1581 aa10.82□□□□□ -0.68
TMEM254-206ENST00000450179 IFT140Q96RY7 1462 aa10.8□□□□□ -0.68
TMEM254-206ENST00000450179 TULP1O00294 542 aaPredicted RBP10.79□□□□□ -0.68
TMEM254-206ENST00000450179 GABBR2O75899 941 aa10.79□□□□□ -0.68
TMEM254-206ENST00000450179 TARBP1Q13395 1621 aaKnown RBP10.79□□□□□ -0.68
TMEM254-206ENST00000450179 ZNF608Q9ULD9 1512 aaPredicted RBP10.79□□□□□ -0.68
TMEM254-206ENST00000450179 SUPT5HO00267 1087 aaKnown RBP10.78□□□□□ -0.68
TMEM254-206ENST00000450179 PRR29P0C7W0 189 aa10.77□□□□□ -0.69
TMEM254-206ENST00000450179 POLA1P09884 1462 aaPredicted RBP10.76□□□□□ -0.69
TMEM254-206ENST00000450179 EIF4G3O43432 1585 aaKnown RBP10.75□□□□□ -0.69
TMEM254-206ENST00000450179 CUX1P39880 1505 aa10.74□□□□□ -0.69
TMEM254-206ENST00000450179 FBXO3Q9UK99 471 aa10.73□□□□□ -0.69
TMEM254-206ENST00000450179 KDM2AQ9Y2K7 1162 aa10.72□□□□□ -0.69
TMEM254-206ENST00000450179 FGD5Q6ZNL6 1462 aa10.71□□□□□ -0.69
TMEM254-206ENST00000450179 RAD54L2Q9Y4B4 1467 aa10.7□□□□□ -0.7
TMEM254-206ENST00000450179 HOMEZQ8IX15 550 aa10.7□□□□□ -0.7
TMEM254-206ENST00000450179 GTF3C3Q9Y5Q9 886 aa10.7□□□□□ -0.7
TMEM254-206ENST00000450179 WDR97A6NE52 1622 aa10.69□□□□□ -0.7
TMEM254-206ENST00000450179 AQRO60306 1485 aaKnown RBP eCLIP10.68□□□□□ -0.7
TMEM254-206ENST00000450179 SOGA1O94964 1423 aa10.67□□□□□ -0.7
TMEM254-206ENST00000450179 CHD1O14646 1710 aa10.65□□□□□ -0.7
TMEM254-206ENST00000450179 LHX8Q68G74 356 aa10.65□□□□□ -0.7
TMEM254-206ENST00000450179 CD44P16070 742 aaKnown RBP10.64□□□□□ -0.71
TMEM254-206ENST00000450179 BIVM-ERCC5R4GMW8 1640 aa10.64□□□□□ -0.71
TMEM254-206ENST00000450179 TDRD9Q8NDG6 1382 aaKnown RBP10.64□□□□□ -0.71
TMEM254-206ENST00000450179 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.63□□□□□ -0.71
TMEM254-206ENST00000450179 SYNJ1O43426 1573 aa10.62□□□□□ -0.71
TMEM254-206ENST00000450179 FARP1Q9Y4F1 1045 aaPredicted RBP10.62□□□□□ -0.71
TMEM254-206ENST00000450179 TOP2BQ02880 1626 aa10.62□□□□□ -0.71
TMEM254-206ENST00000450179 ABCA5Q8WWZ7 1642 aa10.61□□□□□ -0.71
TMEM254-206ENST00000450179 ABCA10Q8WWZ4 1543 aa10.6□□□□□ -0.71
TMEM254-206ENST00000450179 BBXQ8WY36 941 aaPredicted RBP10.6□□□□□ -0.71
TMEM254-206ENST00000450179 PBRM1Q86U86 1689 aa10.6□□□□□ -0.71
TMEM254-206ENST00000450179 WRNQ14191 1432 aaPredicted RBP eCLIP10.59□□□□□ -0.71
TMEM254-206ENST00000450179 POTEIP0CG38 1075 aa10.59□□□□□ -0.71
TMEM254-206ENST00000450179 SNAPC4Q5SXM2 1469 aa10.59□□□□□ -0.71
TMEM254-206ENST00000450179 GRIN2BQ13224 1484 aa10.58□□□□□ -0.72
TMEM254-206ENST00000450179 RIMBP3CA6NJZ7 1639 aa10.58□□□□□ -0.72
TMEM254-206ENST00000450179 RIMBP3BA6NNM3 1639 aa10.58□□□□□ -0.72
TMEM254-206ENST00000450179 RIMBP3Q9UFD9 1639 aa10.58□□□□□ -0.72
TMEM254-206ENST00000450179 MAGI1Q96QZ7 1491 aaPredicted RBP10.57□□□□□ -0.72
TMEM254-206ENST00000450179 GAPVD1Q14C86 1478 aa10.56□□□□□ -0.72
TMEM254-206ENST00000450179 ARHGEF11O15085 1522 aa10.55□□□□□ -0.72
TMEM254-206ENST00000450179 SYNJ2O15056 1496 aa10.54□□□□□ -0.72
TMEM254-206ENST00000450179 CLASP1Q7Z460 1538 aa10.53□□□□□ -0.72
TMEM254-206ENST00000450179 PKD2Q13563 968 aa10.52□□□□□ -0.73
TMEM254-206ENST00000450179 VASPP50552 380 aaPredicted RBP10.51□□□□□ -0.73
TMEM254-206ENST00000450179 TRIM41Q8WV44 630 aa10.51□□□□□ -0.73
TMEM254-206ENST00000450179 ADAMTS12P58397 1594 aa10.5□□□□□ -0.73
TMEM254-206ENST00000450179 TMEM132AQ24JP5 1023 aa10.49□□□□□ -0.73
TMEM254-206ENST00000450179 PAXIP1Q6ZW49 1069 aaPredicted RBP10.49□□□□□ -0.73
TMEM254-206ENST00000450179 CHMP7Q8WUX9 453 aaPredicted RBP10.48□□□□□ -0.73
TMEM254-206ENST00000450179 CREBZFQ9NS37 354 aa10.47□□□□□ -0.73
TMEM254-206ENST00000450179 ERICH3Q5RHP9 1530 aa10.47□□□□□ -0.73
TMEM254-206ENST00000450179 ZRANB1Q9UGI0 708 aa10.46□□□□□ -0.73
TMEM254-206ENST00000450179 GRIN2AQ12879 1464 aa10.46□□□□□ -0.74
TMEM254-206ENST00000450179 ARAP1Q96P48 1450 aa10.46□□□□□ -0.74
TMEM254-206ENST00000450179 NBR1Q14596 966 aa10.44□□□□□ -0.74
TMEM254-206ENST00000450179 DCBLD2Q96PD2 775 aa10.44□□□□□ -0.74
TMEM254-206ENST00000450179 CEP170Q5SW79 1584 aa10.43□□□□□ -0.74
TMEM254-206ENST00000450179 FHAD1B1AJZ9 1412 aa10.43□□□□□ -0.74
TMEM254-206ENST00000450179 NUP160Q12769 1436 aa10.43□□□□□ -0.74
TMEM254-206ENST00000450179 IFNLR1Q8IU57 520 aaPredicted RBP10.43□□□□□ -0.74
TMEM254-206ENST00000450179 ZNF579Q8NAF0 562 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms