RNA–Protein interactions for RNA: ENST00000450179.1

TMEM254-206, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-206ENST00000450179 AEBP2Q6ZN18 517 aaPredicted RBP20.86■□□□□ 0.93
TMEM254-206ENST00000450179 CHIC1Q5VXU3 224 aa19.5■□□□□ 0.71
TMEM254-206ENST00000450179 SENP3Q9H4L4 574 aaPredicted RBP17.73■□□□□ 0.43
TMEM254-206ENST00000450179 PHF23Q9BUL5 403 aaPredicted RBP17.52■□□□□ 0.4
TMEM254-206ENST00000450179 FOXD1Q16676 465 aa16.62■□□□□ 0.25
TMEM254-206ENST00000450179 POTEDQ86YR6 584 aa15.7■□□□□ 0.1
TMEM254-206ENST00000450179 MSH5O43196 834 aa15.57■□□□□ 0.08
TMEM254-206ENST00000450179 PIAS4Q8N2W9 510 aaPredicted RBP15.48■□□□□ 0.07
TMEM254-206ENST00000450179 PLPPR3Q6T4P5 718 aa15.44■□□□□ 0.06
TMEM254-206ENST00000450179 PPP6R1Q9UPN7 881 aa15.39■□□□□ 0.05
TMEM254-206ENST00000450179 ADRA2BP18089 450 aa15.33■□□□□ 0.04
TMEM254-206ENST00000450179 NISCHQ9Y2I1 1504 aa14.85□□□□□ -0.03
TMEM254-206ENST00000450179 MAPK8IP2Q13387 824 aaPredicted RBP14.18□□□□□ -0.14
TMEM254-206ENST00000450179 DMRT2Q9Y5R5 561 aa14.04□□□□□ -0.16
TMEM254-206ENST00000450179 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.19
TMEM254-206ENST00000450179 CACNB1Q02641 598 aaPredicted RBP13.58□□□□□ -0.24
TMEM254-206ENST00000450179 DCAF8L1A6NGE4 600 aa13.57□□□□□ -0.24
TMEM254-206ENST00000450179 PPP4R3CPQ6ZMV5 832 aa13.55□□□□□ -0.24
TMEM254-206ENST00000450179 HOXD11P31277 338 aaPredicted RBP13.41□□□□□ -0.26
TMEM254-206ENST00000450179 CNKSR2Q8WXI2 1034 aa13.3□□□□□ -0.28
TMEM254-206ENST00000450179 RNF39Q9H2S5 420 aa13.3□□□□□ -0.28
TMEM254-206ENST00000450179 CCDC180Q9P1Z9 1646 aa13.28□□□□□ -0.28
TMEM254-206ENST00000450179 EHMT2Q96KQ7 1210 aa13.26□□□□□ -0.29
TMEM254-206ENST00000450179 RNF216Q9NWF9 866 aaPredicted RBP13.24□□□□□ -0.29
TMEM254-206ENST00000450179 ABCC9O60706 1549 aa13.06□□□□□ -0.32
TMEM254-206ENST00000450179 C1QBPQ07021 282 aaKnown RBP13.05□□□□□ -0.32
TMEM254-206ENST00000450179 SLC24A1O60721 1099 aa13.01□□□□□ -0.33
TMEM254-206ENST00000450179 NCBP3Q53F19 620 aaKnown RBP12.89□□□□□ -0.35
TMEM254-206ENST00000450179 DNAJC5BQ9UF47 199 aa12.89□□□□□ -0.35
TMEM254-206ENST00000450179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.83□□□□□ -0.36
TMEM254-206ENST00000450179 KCNA4P22459 653 aa12.8□□□□□ -0.36
TMEM254-206ENST00000450179 NPM3O75607 178 aaKnown RBP12.78□□□□□ -0.36
TMEM254-206ENST00000450179 CSRNP3Q8WYN3 585 aa12.66□□□□□ -0.38
TMEM254-206ENST00000450179 U3KPZ7 1027 aaPredicted RBP12.54□□□□□ -0.4
TMEM254-206ENST00000450179 RB1CC1Q8TDY2 1594 aa12.52□□□□□ -0.4
TMEM254-206ENST00000450179 NACADO15069 1562 aa12.48□□□□□ -0.41
TMEM254-206ENST00000450179 SPINK5Q9NQ38 1064 aaPredicted RBP12.47□□□□□ -0.41
TMEM254-206ENST00000450179 CAPN15O75808 1086 aa12.44□□□□□ -0.42
TMEM254-206ENST00000450179 SLC4A1APQ9BWU0 796 aaKnown RBP12.42□□□□□ -0.42
TMEM254-206ENST00000450179 MYO15BQ96JP2 1530 aa12.4□□□□□ -0.42
TMEM254-206ENST00000450179 DSG3P32926 999 aa12.39□□□□□ -0.43
TMEM254-206ENST00000450179 AMER1Q5JTC6 1135 aaPredicted RBP12.37□□□□□ -0.43
TMEM254-206ENST00000450179 ZCCHC6Q5VYS8 1495 aaKnown RBP12.35□□□□□ -0.43
TMEM254-206ENST00000450179 DCAF8L2P0C7V8 631 aa12.32□□□□□ -0.44
TMEM254-206ENST00000450179 UNC13AQ9UPW8 1703 aa12.31□□□□□ -0.44
TMEM254-206ENST00000450179 RTN4Q9NQC3 1192 aaKnown RBP12.31□□□□□ -0.44
TMEM254-206ENST00000450179 DCAF1Q9Y4B6 1507 aa12.3□□□□□ -0.44
TMEM254-206ENST00000450179 SLC4A2P04920 1241 aa12.28□□□□□ -0.44
TMEM254-206ENST00000450179 POTEHQ6S545 545 aa12.24□□□□□ -0.45
TMEM254-206ENST00000450179 BICRAQ9NZM4 1560 aa12.21□□□□□ -0.46
TMEM254-206ENST00000450179 TRHP20396 242 aaPredicted RBP12.19□□□□□ -0.46
TMEM254-206ENST00000450179 ABCB7O75027 752 aa12.18□□□□□ -0.46
TMEM254-206ENST00000450179 PABPN1Q86U42 306 aaKnown RBP eCLIP12.15□□□□□ -0.46
TMEM254-206ENST00000450179 ZNF219Q9P2Y4 722 aaPredicted RBP12.07□□□□□ -0.48
TMEM254-206ENST00000450179 SCRIBQ14160 1630 aa12.07□□□□□ -0.48
TMEM254-206ENST00000450179 APLP2Q06481 763 aa12.04□□□□□ -0.48
TMEM254-206ENST00000450179 SHROOM4Q9ULL8 1493 aa12.02□□□□□ -0.48
TMEM254-206ENST00000450179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.99□□□□□ -0.49
TMEM254-206ENST00000450179 HNRNPUL2Q1KMD3 747 aaKnown RBP11.99□□□□□ -0.49
TMEM254-206ENST00000450179 SAMD1Q6SPF0 538 aaPredicted RBP11.94□□□□□ -0.5
TMEM254-206ENST00000450179 EIF4G1Q04637 1599 aaKnown RBP11.86□□□□□ -0.51
TMEM254-206ENST00000450179 CC2D2AQ9P2K1 1620 aa11.84□□□□□ -0.51
TMEM254-206ENST00000450179 ZBTB22O15209 634 aa11.8□□□□□ -0.52
TMEM254-206ENST00000450179 MYCNP04198 464 aaPredicted RBP11.78□□□□□ -0.52
TMEM254-206ENST00000450179 POLA2Q14181 598 aa11.78□□□□□ -0.52
TMEM254-206ENST00000450179 RBM42Q9BTD8 480 aaKnown RBP11.76□□□□□ -0.53
TMEM254-206ENST00000450179 CECR2Q9BXF3 1484 aa11.75□□□□□ -0.53
TMEM254-206ENST00000450179 CHRDL2Q6WN34 429 aa11.67□□□□□ -0.54
TMEM254-206ENST00000450179 ATF5Q9Y2D1 282 aaPredicted RBP11.63□□□□□ -0.55
TMEM254-206ENST00000450179 SMARCA4P51532 1647 aa11.56□□□□□ -0.56
TMEM254-206ENST00000450179 FOXD4L1Q9NU39 408 aa11.55□□□□□ -0.56
TMEM254-206ENST00000450179 NCAPD3P42695 1498 aa11.52□□□□□ -0.56
TMEM254-206ENST00000450179 ATAD2BQ9ULI0 1458 aa11.51□□□□□ -0.57
TMEM254-206ENST00000450179 BAZ1AQ9NRL2 1556 aaPredicted RBP11.5□□□□□ -0.57
TMEM254-206ENST00000450179 SMARCA2P51531 1590 aa11.48□□□□□ -0.57
TMEM254-206ENST00000450179 PEG3Q9GZU2 1588 aa11.47□□□□□ -0.57
TMEM254-206ENST00000450179 HMGXB3Q12766 1538 aa11.47□□□□□ -0.57
TMEM254-206ENST00000450179 OSCARQ8IYS5 282 aa11.46□□□□□ -0.57
TMEM254-206ENST00000450179 AKT1S1Q96B36 256 aa11.45□□□□□ -0.58
TMEM254-206ENST00000450179 MROH2BQ7Z745 1585 aa11.45□□□□□ -0.58
TMEM254-206ENST00000450179 ZBTB12Q9Y330 459 aaPredicted RBP11.42□□□□□ -0.58
TMEM254-206ENST00000450179 REM2Q8IYK8 340 aaPredicted RBP11.4□□□□□ -0.58
TMEM254-206ENST00000450179 BAZ1BQ9UIG0 1483 aaKnown RBP11.38□□□□□ -0.59
TMEM254-206ENST00000450179 PIP4P2Q8N4L2 257 aa11.36□□□□□ -0.59
TMEM254-206ENST00000450179 FKBP8Q14318 412 aa11.35□□□□□ -0.59
TMEM254-206ENST00000450179 SP7Q8TDD2 431 aaPredicted RBP11.35□□□□□ -0.59
TMEM254-206ENST00000450179 BCANQ96GW7 911 aa11.33□□□□□ -0.6
TMEM254-206ENST00000450179 WIZO95785 1651 aa11.32□□□□□ -0.6
TMEM254-206ENST00000450179 PITPNM1O00562 1244 aa11.31□□□□□ -0.6
TMEM254-206ENST00000450179 PLCB2Q00722 1185 aa11.31□□□□□ -0.6
TMEM254-206ENST00000450179 NESP48681 1621 aa11.29□□□□□ -0.6
TMEM254-206ENST00000450179 RSF1Q96T23 1441 aaPredicted RBP11.26□□□□□ -0.61
TMEM254-206ENST00000450179 PRKCSHP14314 528 aaPredicted RBP11.25□□□□□ -0.61
TMEM254-206ENST00000450179 TAOK2Q9UL54 1235 aa11.24□□□□□ -0.61
TMEM254-206ENST00000450179 LAMC3Q9Y6N6 1575 aa11.24□□□□□ -0.61
TMEM254-206ENST00000450179 DAXXQ9UER7 740 aaPredicted RBP11.23□□□□□ -0.61
TMEM254-206ENST00000450179 ERCC6Q03468 1493 aa11.23□□□□□ -0.61
TMEM254-206ENST00000450179 HAX1O00165 279 aa11.22□□□□□ -0.61
TMEM254-206ENST00000450179 FXR2P51116 673 aaKnown RBP eCLIP11.21□□□□□ -0.61
TMEM254-206ENST00000450179 CUX2O14529 1486 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms