RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 MAP3K1Q13233 1512 aa19.83■□□□□ 0.76
POLR1B-209ENST00000448770 PCF11O94913 1555 aaKnown RBP19.79■□□□□ 0.76
POLR1B-209ENST00000448770 CADPSQ9ULU8 1353 aa19.79■□□□□ 0.76
POLR1B-209ENST00000448770 SETD5Q9C0A6 1442 aa19.77■□□□□ 0.76
POLR1B-209ENST00000448770 WDR97A6NE52 1622 aa19.77■□□□□ 0.75
POLR1B-209ENST00000448770 CFAP43Q8NDM7 1665 aa19.76■□□□□ 0.75
POLR1B-209ENST00000448770 SIN3AQ96ST3 1273 aa19.76■□□□□ 0.75
POLR1B-209ENST00000448770 P3H3Q8IVL6 736 aa19.75■□□□□ 0.75
POLR1B-209ENST00000448770 FAM50AQ14320 339 aaKnown RBP19.7■□□□□ 0.74
POLR1B-209ENST00000448770 FHOD3Q2V2M9 1422 aa19.7■□□□□ 0.74
POLR1B-209ENST00000448770 RAD54L2Q9Y4B4 1467 aa19.67■□□□□ 0.74
POLR1B-209ENST00000448770 FHAD1B1AJZ9 1412 aa19.66■□□□□ 0.74
POLR1B-209ENST00000448770 FANCD2Q9BXW9 1451 aa19.63■□□□□ 0.73
POLR1B-209ENST00000448770 DDX10Q13206 875 aaKnown RBP19.63■□□□□ 0.73
POLR1B-209ENST00000448770 ATP1B4Q9UN42 357 aaPredicted RBP19.63■□□□□ 0.73
POLR1B-209ENST00000448770 HIRIP3Q9BW71 556 aaPredicted RBP19.61■□□□□ 0.73
POLR1B-209ENST00000448770 MYT1Q01538 1121 aa19.61■□□□□ 0.73
POLR1B-209ENST00000448770 FYCO1Q9BQS8 1478 aa19.59■□□□□ 0.73
POLR1B-209ENST00000448770 PPP1R15AO75807 674 aaPredicted RBP19.59■□□□□ 0.73
POLR1B-209ENST00000448770 POLA1P09884 1462 aaPredicted RBP19.58■□□□□ 0.73
POLR1B-209ENST00000448770 TSHZ2Q9NRE2 1034 aa19.58■□□□□ 0.73
POLR1B-209ENST00000448770 ABCA10Q8WWZ4 1543 aa19.58■□□□□ 0.72
POLR1B-209ENST00000448770 CASKIN1Q8WXD9 1431 aa19.57■□□□□ 0.72
POLR1B-209ENST00000448770 DNMBPQ6XZF7 1577 aa19.56■□□□□ 0.72
POLR1B-209ENST00000448770 LAMC3Q9Y6N6 1575 aa19.55■□□□□ 0.72
POLR1B-209ENST00000448770 TOPBP1Q92547 1522 aa19.55■□□□□ 0.72
POLR1B-209ENST00000448770 DNAJC5BQ9UF47 199 aa19.54■□□□□ 0.72
POLR1B-209ENST00000448770 NESP48681 1621 aa19.54■□□□□ 0.72
POLR1B-209ENST00000448770 EFCAB5A4FU69 1503 aa19.54■□□□□ 0.72
POLR1B-209ENST00000448770 PTPRKQ15262 1439 aa19.53■□□□□ 0.72
POLR1B-209ENST00000448770 SNAPC4Q5SXM2 1469 aa19.52■□□□□ 0.72
POLR1B-209ENST00000448770 CTTNBP2Q8WZ74 1663 aa19.52■□□□□ 0.72
POLR1B-209ENST00000448770 AQRO60306 1485 aaKnown RBP eCLIP19.52■□□□□ 0.712e-6■■■■■ 31.8
POLR1B-209ENST00000448770 LRRIQ1Q96JM4 1722 aa19.51■□□□□ 0.71
POLR1B-209ENST00000448770 FGD6Q6ZV73 1430 aa19.51■□□□□ 0.71
POLR1B-209ENST00000448770 BCANQ96GW7 911 aa19.5■□□□□ 0.71
POLR1B-209ENST00000448770 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.49■□□□□ 0.71
POLR1B-209ENST00000448770 CUL7Q14999 1698 aa19.48■□□□□ 0.71
POLR1B-209ENST00000448770 CCDC18Q5T9S5 1454 aa19.46■□□□□ 0.71
POLR1B-209ENST00000448770 TIMELESSQ9UNS1 1208 aa19.44■□□□□ 0.7
POLR1B-209ENST00000448770 PTPN23Q9H3S7 1636 aa19.43■□□□□ 0.7
POLR1B-209ENST00000448770 FKBP8Q14318 412 aa19.42■□□□□ 0.7
POLR1B-209ENST00000448770 KDM5BQ9UGL1 1544 aa19.41■□□□□ 0.7
POLR1B-209ENST00000448770 FMN1Q68DA7 1419 aa19.41■□□□□ 0.7
POLR1B-209ENST00000448770 HFM1A2PYH4 1435 aa19.4■□□□□ 0.7
POLR1B-209ENST00000448770 SAMD9Q5K651 1589 aa19.4■□□□□ 0.7
POLR1B-209ENST00000448770 URB2Q14146 1524 aaKnown RBP19.4■□□□□ 0.7
POLR1B-209ENST00000448770 TRIM52Q96A61 297 aa19.4■□□□□ 0.7
POLR1B-209ENST00000448770 MTUS2Q5JR59 1369 aa19.38■□□□□ 0.69
POLR1B-209ENST00000448770 NAIPQ13075 1403 aa19.38■□□□□ 0.69
POLR1B-209ENST00000448770 UACAQ9BZF9 1416 aa19.38■□□□□ 0.69
POLR1B-209ENST00000448770 NCOA2Q15596 1464 aa19.38■□□□□ 0.69
POLR1B-209ENST00000448770 GRIN2BQ13224 1484 aa19.37■□□□□ 0.69
POLR1B-209ENST00000448770 TDRD9Q8NDG6 1382 aaKnown RBP19.37■□□□□ 0.69
POLR1B-209ENST00000448770 TONSLQ96HA7 1378 aa19.37■□□□□ 0.69
POLR1B-209ENST00000448770 ABCA5Q8WWZ7 1642 aa19.36■□□□□ 0.69
POLR1B-209ENST00000448770 MAGI3Q5TCQ9 1506 aa19.35■□□□□ 0.69
POLR1B-209ENST00000448770 CCER2I3L3R5 266 aa19.35■□□□□ 0.69
POLR1B-209ENST00000448770 PDS5BQ9NTI5 1447 aa19.35■□□□□ 0.69
POLR1B-209ENST00000448770 MYOM3Q5VTT5 1437 aa19.34■□□□□ 0.69
POLR1B-209ENST00000448770 ANP32CO43423 234 aa19.32■□□□□ 0.68
POLR1B-209ENST00000448770 KIF21AQ7Z4S6 1674 aa19.32■□□□□ 0.68
POLR1B-209ENST00000448770 DENND4BO75064 1496 aaPredicted RBP19.31■□□□□ 0.68
POLR1B-209ENST00000448770 ARHGEF11O15085 1522 aa19.28■□□□□ 0.68
POLR1B-209ENST00000448770 UGGT2Q9NYU1 1516 aa19.28■□□□□ 0.68
POLR1B-209ENST00000448770 SUPT6HQ7KZ85 1726 aaKnown RBP19.28■□□□□ 0.68
POLR1B-209ENST00000448770 GAPVD1Q14C86 1478 aa19.28■□□□□ 0.68
POLR1B-209ENST00000448770 EHBP1L1Q8N3D4 1523 aa19.27■□□□□ 0.68
POLR1B-209ENST00000448770 KDM6BO15054 1643 aa19.27■□□□□ 0.68
POLR1B-209ENST00000448770 THOC2Q8NI27 1593 aaKnown RBP19.25■□□□□ 0.67
POLR1B-209ENST00000448770 RRP7BPQ9NSQ0 103 aa19.24■□□□□ 0.67
POLR1B-209ENST00000448770 CHIC2Q9UKJ5 165 aa19.22■□□□□ 0.67
POLR1B-209ENST00000448770 ANP32EQ9BTT0 268 aa19.2■□□□□ 0.66
POLR1B-209ENST00000448770 WASHC2AQ641Q2 1341 aa19.19■□□□□ 0.66
POLR1B-209ENST00000448770 GCC2Q8IWJ2 1684 aa19.19■□□□□ 0.66
POLR1B-209ENST00000448770 TCOF1Q13428 1488 aaKnown RBP19.18■□□□□ 0.66
POLR1B-209ENST00000448770 HECW1Q76N89 1606 aa19.18■□□□□ 0.66
POLR1B-209ENST00000448770 HSPA5P11021 654 aaKnown RBP19.17■□□□□ 0.66
POLR1B-209ENST00000448770 NEFLP07196 543 aa19.16■□□□□ 0.66
POLR1B-209ENST00000448770 TARBP1Q13395 1621 aaKnown RBP19.15■□□□□ 0.66
POLR1B-209ENST00000448770 CDK13Q14004 1512 aaKnown RBP19.15■□□□□ 0.66
POLR1B-209ENST00000448770 RBM19Q9Y4C8 960 aaKnown RBP19.14■□□□□ 0.66
POLR1B-209ENST00000448770 CCDC184Q52MB2 194 aa19.13■□□□□ 0.65
POLR1B-209ENST00000448770 FOXD1Q16676 465 aa19.12■□□□□ 0.65
POLR1B-209ENST00000448770 EPRSP07814 1512 aaKnown RBP19.11■□□□□ 0.65
POLR1B-209ENST00000448770 ARID3CA6NKF2 412 aa19.11■□□□□ 0.65
POLR1B-209ENST00000448770 HNRNPUQ00839 825 aaKnown RBP eCLIP19.11■□□□□ 0.65
POLR1B-209ENST00000448770 MRC2Q9UBG0 1479 aa19.11■□□□□ 0.65
POLR1B-209ENST00000448770 C11orf95C9JLR9 678 aaPredicted RBP19.1■□□□□ 0.65
POLR1B-209ENST00000448770 IRX6P78412 446 aaPredicted RBP19.1■□□□□ 0.65
POLR1B-209ENST00000448770 AKNAQ7Z591 1439 aa19.08■□□□□ 0.65
POLR1B-209ENST00000448770 PBRM1Q86U86 1689 aa19.07■□□□□ 0.64
POLR1B-209ENST00000448770 WDR62O43379 1518 aa19.07■□□□□ 0.64
POLR1B-209ENST00000448770 L3MBTL2Q969R5 705 aa19.07■□□□□ 0.64
POLR1B-209ENST00000448770 IQGAP2Q13576 1575 aa19.06■□□□□ 0.64
POLR1B-209ENST00000448770 MPHOSPH9Q99550 1183 aa19.06■□□□□ 0.64
POLR1B-209ENST00000448770 CNTLNQ9NXG0 1405 aa19.04■□□□□ 0.64
POLR1B-209ENST00000448770 ADAMTS12P58397 1594 aa19.03■□□□□ 0.64
POLR1B-209ENST00000448770 EIF4G2P78344 907 aaKnown RBP eCLIP19.02■□□□□ 0.64
POLR1B-209ENST00000448770 NBPF8Q3BBV2 869 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms