RNA–Protein interactions for RNA: ENST00000448437.6

STRC-204, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 2,518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-204ENST00000448437 ATAD2BQ9ULI0 1458 aa17.97■□□□□ 0.47
STRC-204ENST00000448437 WDR97A6NE52 1622 aa17.95■□□□□ 0.46
STRC-204ENST00000448437 SIN3AQ96ST3 1273 aa17.95■□□□□ 0.46
STRC-204ENST00000448437 HIRIP3Q9BW71 556 aaPredicted RBP17.95■□□□□ 0.46
STRC-204ENST00000448437 EIF5BO60841 1220 aaKnown RBP17.94■□□□□ 0.46
STRC-204ENST00000448437 PPP1R15AO75807 674 aaPredicted RBP17.93■□□□□ 0.46
STRC-204ENST00000448437 MSH5O43196 834 aa17.91■□□□□ 0.46
STRC-204ENST00000448437 ANP32CO43423 234 aa17.91■□□□□ 0.46
STRC-204ENST00000448437 SETD5Q9C0A6 1442 aa17.88■□□□□ 0.45
STRC-204ENST00000448437 CCER2I3L3R5 266 aa17.88■□□□□ 0.45
STRC-204ENST00000448437 ARHGAP35Q9NRY4 1499 aa17.87■□□□□ 0.45
STRC-204ENST00000448437 BIVM-ERCC5R4GMW8 1640 aa17.86■□□□□ 0.45
STRC-204ENST00000448437 FAM50AQ14320 339 aaKnown RBP17.82■□□□□ 0.44
STRC-204ENST00000448437 NCAPD3P42695 1498 aa17.82■□□□□ 0.44
STRC-204ENST00000448437 KIF27Q86VH2 1401 aa17.8■□□□□ 0.44
STRC-204ENST00000448437 IRX6P78412 446 aaPredicted RBP17.79■□□□□ 0.44
STRC-204ENST00000448437 PLEKHG5O94827 1062 aa17.78■□□□□ 0.44
STRC-204ENST00000448437 CDK11AQ9UQ88 783 aaPredicted RBP17.78■□□□□ 0.44
STRC-204ENST00000448437 FANCIQ9NVI1 1328 aa17.77■□□□□ 0.44
STRC-204ENST00000448437 TIAM1Q13009 1591 aa17.76■□□□□ 0.43
STRC-204ENST00000448437 PHLDB1Q86UU1 1377 aa17.75■□□□□ 0.43
STRC-204ENST00000448437 TIMELESSQ9UNS1 1208 aa17.75■□□□□ 0.43
STRC-204ENST00000448437 HMGXB3Q12766 1538 aa17.74■□□□□ 0.43
STRC-204ENST00000448437 HNRNPUQ00839 825 aaKnown RBP eCLIP17.73■□□□□ 0.43
STRC-204ENST00000448437 CUX1P39880 1505 aa17.73■□□□□ 0.43
STRC-204ENST00000448437 LRRC9Q6ZRR7 1453 aa17.71■□□□□ 0.43
STRC-204ENST00000448437 ATP1B4Q9UN42 357 aaPredicted RBP17.67■□□□□ 0.42
STRC-204ENST00000448437 MAP3K1Q13233 1512 aa17.67■□□□□ 0.42
STRC-204ENST00000448437 TONSLQ96HA7 1378 aa17.67■□□□□ 0.42
STRC-204ENST00000448437 P3H3Q8IVL6 736 aa17.6■□□□□ 0.41
STRC-204ENST00000448437 PPP4R2Q9NY27 417 aa17.57■□□□□ 0.4
STRC-204ENST00000448437 DEKP35659 375 aaKnown RBP17.57■□□□□ 0.4
STRC-204ENST00000448437 IGF1RP08069 1367 aa17.56■□□□□ 0.4
STRC-204ENST00000448437 MYT1LQ9UL68 1186 aa17.56■□□□□ 0.4
STRC-204ENST00000448437 FHAD1B1AJZ9 1412 aa17.55■□□□□ 0.4
STRC-204ENST00000448437 ANO8Q9HCE9 1232 aaPredicted RBP17.54■□□□□ 0.4
STRC-204ENST00000448437 PCF11O94913 1555 aaKnown RBP17.54■□□□□ 0.4
STRC-204ENST00000448437 CFAP43Q8NDM7 1665 aa17.54■□□□□ 0.4
STRC-204ENST00000448437 B4GALNT3Q6L9W6 998 aa17.53■□□□□ 0.4
STRC-204ENST00000448437 ERICH6BQ5W0A0 696 aa17.52■□□□□ 0.4
STRC-204ENST00000448437 CARMIL1Q5VZK9 1371 aa17.52■□□□□ 0.39
STRC-204ENST00000448437 CCDC18Q5T9S5 1454 aa17.51■□□□□ 0.39
STRC-204ENST00000448437 NBR1Q14596 966 aa17.48■□□□□ 0.39
STRC-204ENST00000448437 WASHC2AQ641Q2 1341 aa17.48■□□□□ 0.39
STRC-204ENST00000448437 CCDC184Q52MB2 194 aa17.47■□□□□ 0.39
STRC-204ENST00000448437 UBE2Q2Q8WVN8 375 aa17.47■□□□□ 0.39
STRC-204ENST00000448437 FAM9BQ8IZU0 186 aa17.46■□□□□ 0.39
STRC-204ENST00000448437 UACAQ9BZF9 1416 aa17.46■□□□□ 0.39
STRC-204ENST00000448437 NESP48681 1621 aa17.46■□□□□ 0.39
STRC-204ENST00000448437 HSPA5P11021 654 aaKnown RBP17.46■□□□□ 0.38
STRC-204ENST00000448437 NOP58Q9Y2X3 529 aaKnown RBP17.46■□□□□ 0.38
STRC-204ENST00000448437 FHOD3Q2V2M9 1422 aa17.45■□□□□ 0.38
STRC-204ENST00000448437 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.45■□□□□ 0.38
STRC-204ENST00000448437 CFTRP13569 1480 aa17.45■□□□□ 0.38
STRC-204ENST00000448437 FGD6Q6ZV73 1430 aa17.43■□□□□ 0.38
STRC-204ENST00000448437 HFM1A2PYH4 1435 aa17.41■□□□□ 0.38
STRC-204ENST00000448437 PAK3O75914 559 aaPredicted RBP17.41■□□□□ 0.38
STRC-204ENST00000448437 PTPRKQ15262 1439 aa17.4■□□□□ 0.38
STRC-204ENST00000448437 FYCO1Q9BQS8 1478 aa17.4■□□□□ 0.38
STRC-204ENST00000448437 KDM5BQ9UGL1 1544 aa17.39■□□□□ 0.37
STRC-204ENST00000448437 PTPN23Q9H3S7 1636 aa17.39■□□□□ 0.37
STRC-204ENST00000448437 MRS2Q9HD23 443 aa17.39■□□□□ 0.37
STRC-204ENST00000448437 CNTLNQ9NXG0 1405 aa17.38■□□□□ 0.37
STRC-204ENST00000448437 CADPSQ9ULU8 1353 aa17.38■□□□□ 0.37
STRC-204ENST00000448437 EIF4G2P78344 907 aaKnown RBP eCLIP17.38■□□□□ 0.37
STRC-204ENST00000448437 AQRO60306 1485 aaKnown RBP eCLIP17.37■□□□□ 0.37
STRC-204ENST00000448437 ZBED9Q6R2W3 1325 aa17.37■□□□□ 0.37
STRC-204ENST00000448437 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
STRC-204ENST00000448437 CASKIN1Q8WXD9 1431 aa17.36■□□□□ 0.37
STRC-204ENST00000448437 PRKRIP1Q9H875 184 aaPredicted RBP17.36■□□□□ 0.37
STRC-204ENST00000448437 NAIPQ13075 1403 aa17.35■□□□□ 0.37
STRC-204ENST00000448437 MTUS2Q5JR59 1369 aa17.34■□□□□ 0.37
STRC-204ENST00000448437 NCOA2Q15596 1464 aa17.34■□□□□ 0.37
STRC-204ENST00000448437 PODXL2Q9NZ53 605 aa17.31■□□□□ 0.36
STRC-204ENST00000448437 FMN1Q68DA7 1419 aa17.31■□□□□ 0.36
STRC-204ENST00000448437 C11orf95C9JLR9 678 aaPredicted RBP17.3■□□□□ 0.36
STRC-204ENST00000448437 ANP32AP39687 249 aaKnown RBP17.3■□□□□ 0.36
STRC-204ENST00000448437 ERCC6Q03468 1493 aa17.29■□□□□ 0.36
STRC-204ENST00000448437 RRP7BPQ9NSQ0 103 aa17.29■□□□□ 0.36
STRC-204ENST00000448437 RTL5Q5HYW3 569 aaPredicted RBP17.28■□□□□ 0.36
STRC-204ENST00000448437 CCDC7Q96M83 1385 aa17.28■□□□□ 0.36
STRC-204ENST00000448437 EFCAB5A4FU69 1503 aa17.28■□□□□ 0.36
STRC-204ENST00000448437 CHIC2Q9UKJ5 165 aa17.27■□□□□ 0.36
STRC-204ENST00000448437 CCDC136Q96JN2 1154 aa17.26■□□□□ 0.35
STRC-204ENST00000448437 IPO9Q96P70 1041 aaKnown RBP17.26■□□□□ 0.35
STRC-204ENST00000448437 AKNAQ7Z591 1439 aa17.26■□□□□ 0.35
STRC-204ENST00000448437 LAMC3Q9Y6N6 1575 aa17.25■□□□□ 0.35
STRC-204ENST00000448437 CNGB1Q14028 1251 aaPredicted RBP17.25■□□□□ 0.35
STRC-204ENST00000448437 NCOA1Q15788 1441 aa17.25■□□□□ 0.35
STRC-204ENST00000448437 ZBTB47Q9UFB7 747 aaPredicted RBP17.24■□□□□ 0.35
STRC-204ENST00000448437 MYOM3Q5VTT5 1437 aa17.24■□□□□ 0.35
STRC-204ENST00000448437 PRDM2Q13029 1718 aa17.24■□□□□ 0.35
STRC-204ENST00000448437 L3MBTL2Q969R5 705 aa17.23■□□□□ 0.35
STRC-204ENST00000448437 SNAPC4Q5SXM2 1469 aa17.21■□□□□ 0.35
STRC-204ENST00000448437 FOXD1Q16676 465 aa17.21■□□□□ 0.35
STRC-204ENST00000448437 DENND4BO75064 1496 aaPredicted RBP17.2■□□□□ 0.34
STRC-204ENST00000448437 SENP3-EIF4A1A0A087X0R7 540 aa17.2■□□□□ 0.34
STRC-204ENST00000448437 SMG6Q86US8 1419 aaKnown RBP17.2■□□□□ 0.34
STRC-204ENST00000448437 KIF7Q2M1P5 1343 aa17.18■□□□□ 0.34
STRC-204ENST00000448437 NUDCQ9Y266 331 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms