RNA–Protein interactions for RNA: ENST00000448437.6

STRC-204, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 2,518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-204ENST00000448437 NISCHQ9Y2I1 1504 aa24.44■■□□□ 1.5
STRC-204ENST00000448437 SHROOM4Q9ULL8 1493 aa21.59■■□□□ 1.05
STRC-204ENST00000448437 SUPT5HO00267 1087 aaKnown RBP21.45■■□□□ 1.02
STRC-204ENST00000448437 HRCP23327 699 aa21.39■■□□□ 1.02
STRC-204ENST00000448437 MYO15BQ96JP2 1530 aa21.11■□□□□ 0.97
STRC-204ENST00000448437 PCGF6Q9BYE7 350 aa21.09■□□□□ 0.97
STRC-204ENST00000448437 PPARGC1BQ86YN6 1023 aaKnown RBP21■□□□□ 0.95
STRC-204ENST00000448437 CHIC1Q5VXU3 224 aa20.99■□□□□ 0.95
STRC-204ENST00000448437 ZCCHC6Q5VYS8 1495 aaKnown RBP20.77■□□□□ 0.92
STRC-204ENST00000448437 CCDC180Q9P1Z9 1646 aa20.6■□□□□ 0.89
STRC-204ENST00000448437 DCAF1Q9Y4B6 1507 aa20.59■□□□□ 0.89
STRC-204ENST00000448437 PELP1Q8IZL8 1130 aaKnown RBP20.56■□□□□ 0.88
STRC-204ENST00000448437 LOC105371045A0A1W2PR82 267 aa20.52■□□□□ 0.88
STRC-204ENST00000448437 DCAF8L2P0C7V8 631 aa20.46■□□□□ 0.87
STRC-204ENST00000448437 TRIM26Q12899 539 aaPredicted RBP20.42■□□□□ 0.86
STRC-204ENST00000448437 MYT1Q01538 1121 aa20.24■□□□□ 0.83
STRC-204ENST00000448437 ZEB1P37275 1124 aaPredicted RBP20.19■□□□□ 0.82
STRC-204ENST00000448437 SCAF1Q9H7N4 1312 aaKnown RBP20.16■□□□□ 0.82
STRC-204ENST00000448437 ABCC9O60706 1549 aa20.13■□□□□ 0.81
STRC-204ENST00000448437 FAM9AQ8IZU1 332 aaPredicted RBP19.84■□□□□ 0.77
STRC-204ENST00000448437 TRIM41Q8WV44 630 aa19.83■□□□□ 0.77
STRC-204ENST00000448437 EHMT2Q96KQ7 1210 aa19.79■□□□□ 0.76
STRC-204ENST00000448437 ACIN1Q9UKV3 1341 aaKnown RBP19.71■□□□□ 0.75
STRC-204ENST00000448437 NEUROD1Q13562 356 aa19.68■□□□□ 0.74
STRC-204ENST00000448437 RSF1Q96T23 1441 aaPredicted RBP19.63■□□□□ 0.73
STRC-204ENST00000448437 PRKCSHP14314 528 aaPredicted RBP19.62■□□□□ 0.73
STRC-204ENST00000448437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.6■□□□□ 0.73
STRC-204ENST00000448437 CCER1Q8TC90 406 aaPredicted RBP19.57■□□□□ 0.72
STRC-204ENST00000448437 GTF3C3Q9Y5Q9 886 aa19.57■□□□□ 0.72
STRC-204ENST00000448437 TTBK1Q5TCY1 1321 aaPredicted RBP19.56■□□□□ 0.72
STRC-204ENST00000448437 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
STRC-204ENST00000448437 CENPBP07199 599 aaPredicted RBP19.51■□□□□ 0.71
STRC-204ENST00000448437 DIEXFQ68CQ4 756 aaKnown RBP19.49■□□□□ 0.71
STRC-204ENST00000448437 SCRIBQ14160 1630 aa19.45■□□□□ 0.7
STRC-204ENST00000448437 NACADO15069 1562 aa19.26■□□□□ 0.67
STRC-204ENST00000448437 YTHDC1Q96MU7 727 aaKnown RBP19.21■□□□□ 0.67
STRC-204ENST00000448437 SLC24A1O60721 1099 aa19.19■□□□□ 0.66
STRC-204ENST00000448437 ZNF316A6NFI3 1004 aaPredicted RBP19.14■□□□□ 0.65
STRC-204ENST00000448437 CECR2Q9BXF3 1484 aa19.14■□□□□ 0.65
STRC-204ENST00000448437 MROH2BQ7Z745 1585 aa19.1■□□□□ 0.65
STRC-204ENST00000448437 WIZO95785 1651 aa19.05■□□□□ 0.64
STRC-204ENST00000448437 WRNQ14191 1432 aaPredicted RBP eCLIP19.04■□□□□ 0.64
STRC-204ENST00000448437 APLP2Q06481 763 aa19.03■□□□□ 0.64
STRC-204ENST00000448437 CEP162Q5TB80 1403 aa19.01■□□□□ 0.63
STRC-204ENST00000448437 MIER1Q8N108 512 aa19■□□□□ 0.63
STRC-204ENST00000448437 EIF4G1Q04637 1599 aaKnown RBP18.93■□□□□ 0.62
STRC-204ENST00000448437 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
STRC-204ENST00000448437 ABCC8Q09428 1581 aa18.9■□□□□ 0.62
STRC-204ENST00000448437 PABPN1Q86U42 306 aaKnown RBP eCLIP18.9■□□□□ 0.62
STRC-204ENST00000448437 ERICH6Q7L0X2 663 aa18.9■□□□□ 0.62
STRC-204ENST00000448437 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.61
STRC-204ENST00000448437 BCL11AQ9H165 835 aa18.88■□□□□ 0.61
STRC-204ENST00000448437 TNIKQ9UKE5 1360 aa18.86■□□□□ 0.61
STRC-204ENST00000448437 UNC13AQ9UPW8 1703 aa18.86■□□□□ 0.61
STRC-204ENST00000448437 UBTFP17480 764 aaKnown RBP18.85■□□□□ 0.61
STRC-204ENST00000448437 SOGA1O94964 1423 aa18.84■□□□□ 0.61
STRC-204ENST00000448437 HNRNPUL2Q1KMD3 747 aaKnown RBP18.83■□□□□ 0.61
STRC-204ENST00000448437 CSRNP3Q8WYN3 585 aa18.76■□□□□ 0.59
STRC-204ENST00000448437 BICRAQ9NZM4 1560 aa18.73■□□□□ 0.59
STRC-204ENST00000448437 RUSC2Q8N2Y8 1516 aa18.72■□□□□ 0.59
STRC-204ENST00000448437 EEA1Q15075 1411 aa18.68■□□□□ 0.58
STRC-204ENST00000448437 GOLGA3Q08378 1498 aa18.67■□□□□ 0.58
STRC-204ENST00000448437 TOP2AP11388 1531 aaKnown RBP18.66■□□□□ 0.58
STRC-204ENST00000448437 SUPT16HQ9Y5B9 1047 aaKnown RBP18.65■□□□□ 0.58
STRC-204ENST00000448437 SMARCA2P51531 1590 aa18.61■□□□□ 0.57
STRC-204ENST00000448437 CLSPNQ9HAW4 1339 aa18.59■□□□□ 0.57
STRC-204ENST00000448437 DNAJC5BQ9UF47 199 aa18.57■□□□□ 0.56
STRC-204ENST00000448437 CLIP1P30622 1438 aa18.53■□□□□ 0.56
STRC-204ENST00000448437 TSHZ2Q9NRE2 1034 aa18.52■□□□□ 0.55
STRC-204ENST00000448437 SMARCA4P51532 1647 aa18.5■□□□□ 0.55
STRC-204ENST00000448437 CEP164Q9UPV0 1460 aa18.49■□□□□ 0.55
STRC-204ENST00000448437 VPS8Q8N3P4 1428 aa18.48■□□□□ 0.55
STRC-204ENST00000448437 RANGAP1P46060 587 aaPredicted RBP18.48■□□□□ 0.55
STRC-204ENST00000448437 ANP32EQ9BTT0 268 aa18.48■□□□□ 0.55
STRC-204ENST00000448437 DHX57Q6P158 1386 aaKnown RBP18.41■□□□□ 0.54
STRC-204ENST00000448437 KIF21BO75037 1637 aa18.41■□□□□ 0.54
STRC-204ENST00000448437 BCANQ96GW7 911 aa18.33■□□□□ 0.53
STRC-204ENST00000448437 RAPGEF2Q9Y4G8 1499 aa18.33■□□□□ 0.52
STRC-204ENST00000448437 SYNJ1O43426 1573 aa18.33■□□□□ 0.52
STRC-204ENST00000448437 BAZ1BQ9UIG0 1483 aaKnown RBP18.3■□□□□ 0.52
STRC-204ENST00000448437 KCNH8Q96L42 1107 aa18.3■□□□□ 0.52
STRC-204ENST00000448437 DAXXQ9UER7 740 aaPredicted RBP18.25■□□□□ 0.51
STRC-204ENST00000448437 FKBP8Q14318 412 aa18.22■□□□□ 0.51
STRC-204ENST00000448437 KANK4Q5T7N3 995 aaPredicted RBP18.21■□□□□ 0.51
STRC-204ENST00000448437 ITGAEP38570 1179 aa18.16■□□□□ 0.5
STRC-204ENST00000448437 CC2D2AQ9P2K1 1620 aa18.15■□□□□ 0.5
STRC-204ENST00000448437 ARAP1Q96P48 1450 aa18.12■□□□□ 0.49
STRC-204ENST00000448437 RRBP1Q9P2E9 1410 aaKnown RBP18.11■□□□□ 0.49
STRC-204ENST00000448437 RBM19Q9Y4C8 960 aaKnown RBP18.11■□□□□ 0.49
STRC-204ENST00000448437 NEFLP07196 543 aa18.09■□□□□ 0.49
STRC-204ENST00000448437 DDX10Q13206 875 aaKnown RBP18.09■□□□□ 0.49
STRC-204ENST00000448437 CCNB3Q8WWL7 1395 aa18.06■□□□□ 0.48
STRC-204ENST00000448437 CUX2O14529 1486 aa18.06■□□□□ 0.48
STRC-204ENST00000448437 RAB3GAP2Q9H2M9 1393 aa18.02■□□□□ 0.47
STRC-204ENST00000448437 TRIM52Q96A61 297 aa18.01■□□□□ 0.47
STRC-204ENST00000448437 PEG3Q9GZU2 1588 aa18■□□□□ 0.47
STRC-204ENST00000448437 MAPKBP1O60336 1514 aa18■□□□□ 0.47
STRC-204ENST00000448437 ERICH3Q5RHP9 1530 aa18■□□□□ 0.47
STRC-204ENST00000448437 TOP2BQ02880 1626 aa17.98■□□□□ 0.47
STRC-204ENST00000448437 PRXQ9BXM0 1461 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms