RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 BAZ1BQ9UIG0 1483 aaKnown RBP6.99□□□□□ -1.29
PMS1-215ENST00000447232 ILDR1Q86SU0 546 aaPredicted RBP6.99□□□□□ -1.29
PMS1-215ENST00000447232 SSUH2Q9Y2M2 353 aa6.99□□□□□ -1.29
PMS1-215ENST00000447232 SMARCA4P51532 1647 aa6.99□□□□□ -1.29
PMS1-215ENST00000447232 CYB5RLQ6IPT4 315 aa6.98□□□□□ -1.29
PMS1-215ENST00000447232 PIP4P2Q8N4L2 257 aa6.98□□□□□ -1.29
PMS1-215ENST00000447232 PEG3Q9GZU2 1588 aa6.95□□□□□ -1.3
PMS1-215ENST00000447232 FXR2P51116 673 aaKnown RBP eCLIP6.95□□□□□ -1.3
PMS1-215ENST00000447232 CADPSQ9ULU8 1353 aa6.95□□□□□ -1.3
PMS1-215ENST00000447232 ARAP1Q96P48 1450 aa6.95□□□□□ -1.3
PMS1-215ENST00000447232 SPDYE1Q8NFV5 336 aaPredicted RBP6.92□□□□□ -1.3
PMS1-215ENST00000447232 CEP164Q9UPV0 1460 aa6.91□□□□□ -1.3
PMS1-215ENST00000447232 CLEC11AQ9Y240 323 aa6.91□□□□□ -1.3
PMS1-215ENST00000447232 FANCD2Q9BXW9 1451 aa6.87□□□□□ -1.31
PMS1-215ENST00000447232 RSF1Q96T23 1441 aaPredicted RBP6.86□□□□□ -1.31
PMS1-215ENST00000447232 URB2Q14146 1524 aaKnown RBP6.86□□□□□ -1.31
PMS1-215ENST00000447232 ZNF608Q9ULD9 1512 aaPredicted RBP6.84□□□□□ -1.31
PMS1-215ENST00000447232 PRKAR2AP13861 404 aaKnown RBP6.83□□□□□ -1.32
PMS1-215ENST00000447232 HAX1O00165 279 aa6.82□□□□□ -1.32
PMS1-215ENST00000447232 CHD1O14646 1710 aa6.81□□□□□ -1.32
PMS1-215ENST00000447232 PRR29P0C7W0 189 aa6.81□□□□□ -1.32
PMS1-215ENST00000447232 SPDYE4A6NLX3 237 aa6.8□□□□□ -1.32
PMS1-215ENST00000447232 SP7Q8TDD2 431 aaPredicted RBP6.8□□□□□ -1.32
PMS1-215ENST00000447232 IFT140Q96RY7 1462 aa6.8□□□□□ -1.32
PMS1-215ENST00000447232 CFTRP13569 1480 aa6.79□□□□□ -1.32
PMS1-215ENST00000447232 MROH2BQ7Z745 1585 aa6.79□□□□□ -1.32
PMS1-215ENST00000447232 EVX2Q03828 476 aa6.78□□□□□ -1.32
PMS1-215ENST00000447232 CHADLQ6NUI6 762 aa6.78□□□□□ -1.32
PMS1-215ENST00000447232 EIF4G3O43432 1585 aaKnown RBP6.78□□□□□ -1.32
PMS1-215ENST00000447232 CLASP1Q7Z460 1538 aa6.75□□□□□ -1.33
PMS1-215ENST00000447232 KDM4FA0A1W2PPD8 638 aa6.74□□□□□ -1.33
PMS1-215ENST00000447232 C19orf67A6NJJ6 358 aa6.72□□□□□ -1.33
PMS1-215ENST00000447232 STAG3Q9UJ98 1225 aa6.71□□□□□ -1.34
PMS1-215ENST00000447232 AQRO60306 1485 aaKnown RBP eCLIP6.7□□□□□ -1.341e-9■■■■□ 22.4
PMS1-215ENST00000447232 TOPBP1Q92547 1522 aa6.69□□□□□ -1.34
PMS1-215ENST00000447232 FARP1Q9Y4F1 1045 aaPredicted RBP6.69□□□□□ -1.34
PMS1-215ENST00000447232 TARBP1Q13395 1621 aaKnown RBP6.69□□□□□ -1.34
PMS1-215ENST00000447232 GAPVD1Q14C86 1478 aa6.69□□□□□ -1.34
PMS1-215ENST00000447232 KIF13AQ9H1H9 1805 aa6.68□□□□□ -1.34
PMS1-215ENST00000447232 PRDM2Q13029 1718 aa6.68□□□□□ -1.34
PMS1-215ENST00000447232 WIZO95785 1651 aa6.68□□□□□ -1.34
PMS1-215ENST00000447232 ERCC6L2Q5T890 1561 aa6.67□□□□□ -1.34
PMS1-215ENST00000447232 SYNJ1O43426 1573 aa6.67□□□□□ -1.34
PMS1-215ENST00000447232 PROM2Q8N271 834 aa6.67□□□□□ -1.34
PMS1-215ENST00000447232 CREBZFQ9NS37 354 aa6.67□□□□□ -1.34
PMS1-215ENST00000447232 FBXO41Q8TF61 875 aa6.64□□□□□ -1.35
PMS1-215ENST00000447232 ABCC8Q09428 1581 aa6.64□□□□□ -1.35
PMS1-215ENST00000447232 HECW2Q9P2P5 1572 aa6.64□□□□□ -1.35
PMS1-215ENST00000447232 DNMBPQ6XZF7 1577 aa6.63□□□□□ -1.35
PMS1-215ENST00000447232 SNAPC4Q5SXM2 1469 aa6.62□□□□□ -1.35
PMS1-215ENST00000447232 CD44P16070 742 aaKnown RBP6.62□□□□□ -1.35
PMS1-215ENST00000447232 GABBR2O75899 941 aa6.61□□□□□ -1.35
PMS1-215ENST00000447232 LMTK3Q96Q04 1460 aa6.61□□□□□ -1.35
PMS1-215ENST00000447232 MAGI1Q96QZ7 1491 aaPredicted RBP6.6□□□□□ -1.35
PMS1-215ENST00000447232 POLA1P09884 1462 aaPredicted RBP6.6□□□□□ -1.35
PMS1-215ENST00000447232 CHMP7Q8WUX9 453 aaPredicted RBP6.59□□□□□ -1.35
PMS1-215ENST00000447232 WDR97A6NE52 1622 aa6.59□□□□□ -1.35
PMS1-215ENST00000447232 MNX1P50219 401 aaPredicted RBP6.59□□□□□ -1.36
PMS1-215ENST00000447232 KDM6BO15054 1643 aa6.59□□□□□ -1.36
PMS1-215ENST00000447232 SYNJ2O15056 1496 aa6.58□□□□□ -1.36
PMS1-215ENST00000447232 SOCS7O14512 581 aa6.58□□□□□ -1.36
PMS1-215ENST00000447232 TDRD9Q8NDG6 1382 aaKnown RBP6.58□□□□□ -1.36
PMS1-215ENST00000447232 ABCC10Q5T3U5 1492 aa6.57□□□□□ -1.36
PMS1-215ENST00000447232 TOP2AP11388 1531 aaKnown RBP6.57□□□□□ -1.36
PMS1-215ENST00000447232 ADGRL1O94910 1474 aa6.57□□□□□ -1.36
PMS1-215ENST00000447232 RAD54L2Q9Y4B4 1467 aa6.57□□□□□ -1.36
PMS1-215ENST00000447232 DIP2BQ9P265 1576 aa6.55□□□□□ -1.36
PMS1-215ENST00000447232 FAM69CQ0P6D2 419 aa6.54□□□□□ -1.36
PMS1-215ENST00000447232 ILDR2Q71H61 639 aa6.54□□□□□ -1.36
PMS1-215ENST00000447232 GRIN2BQ13224 1484 aa6.54□□□□□ -1.36
PMS1-215ENST00000447232 FKBP8Q14318 412 aa6.54□□□□□ -1.36
PMS1-215ENST00000447232 ZRANB1Q9UGI0 708 aa6.54□□□□□ -1.36
PMS1-215ENST00000447232 CEP170Q5SW79 1584 aa6.53□□□□□ -1.36
PMS1-215ENST00000447232 SOGA1O94964 1423 aa6.53□□□□□ -1.36
PMS1-215ENST00000447232 MAPKBP1O60336 1514 aa6.52□□□□□ -1.37
PMS1-215ENST00000447232 NPM1P06748 294 aaKnown RBP eCLIP6.52□□□□□ -1.37
PMS1-215ENST00000447232 ZNF579Q8NAF0 562 aaKnown RBP6.52□□□□□ -1.37
PMS1-215ENST00000447232 SHROOM2Q13796 1616 aa6.52□□□□□ -1.37
PMS1-215ENST00000447232 CLCN6P51797 869 aa6.51□□□□□ -1.37
PMS1-215ENST00000447232 CCDC88BA6NC98 1476 aa6.49□□□□□ -1.37
PMS1-215ENST00000447232 PBRM1Q86U86 1689 aa6.49□□□□□ -1.37
PMS1-215ENST00000447232 POTEIP0CG38 1075 aa6.49□□□□□ -1.37
PMS1-215ENST00000447232 NUP160Q12769 1436 aa6.48□□□□□ -1.37
PMS1-215ENST00000447232 MIER1Q8N108 512 aa6.48□□□□□ -1.37
PMS1-215ENST00000447232 TSPOAP1O95153 1857 aa6.48□□□□□ -1.37
PMS1-215ENST00000447232 FGD5Q6ZNL6 1462 aa6.48□□□□□ -1.37
PMS1-215ENST00000447232 PAK3O75914 559 aaPredicted RBP6.47□□□□□ -1.37
PMS1-215ENST00000447232 GRIN2AQ12879 1464 aa6.47□□□□□ -1.37
PMS1-215ENST00000447232 DISP3Q9P2K9 1392 aa6.46□□□□□ -1.38
PMS1-215ENST00000447232 PHF12Q96QT6 1004 aa6.45□□□□□ -1.38
PMS1-215ENST00000447232 GALR2O43603 387 aaPredicted RBP6.45□□□□□ -1.38
PMS1-215ENST00000447232 PPRC1Q5VV67 1664 aaKnown RBP6.44□□□□□ -1.38
PMS1-215ENST00000447232 ADCY10Q96PN6 1610 aa6.44□□□□□ -1.38
PMS1-215ENST00000447232 PLEKHG5O94827 1062 aa6.44□□□□□ -1.38
PMS1-215ENST00000447232 ABCA5Q8WWZ7 1642 aa6.43□□□□□ -1.38
PMS1-215ENST00000447232 PLCD3Q8N3E9 789 aa6.43□□□□□ -1.38
PMS1-215ENST00000447232 COL17A1Q9UMD9 1497 aaPredicted RBP6.42□□□□□ -1.38
PMS1-215ENST00000447232 DCBLD2Q96PD2 775 aa6.42□□□□□ -1.38
PMS1-215ENST00000447232 TSPYL2Q9H2G4 693 aaPredicted RBP6.42□□□□□ -1.38
PMS1-215ENST00000447232 PRG4Q92954 1404 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms