RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 CFTRP13569 1480 aa11.18□□□□□ -0.62
HMGN1P36-201ENST00000446623 SSUH2Q9Y2M2 353 aa11.16□□□□□ -0.62
HMGN1P36-201ENST00000446623 URB2Q14146 1524 aaKnown RBP11.14□□□□□ -0.63
HMGN1P36-201ENST00000446623 CHRDL2Q6WN34 429 aa11.12□□□□□ -0.63
HMGN1P36-201ENST00000446623 TOP2AP11388 1531 aaKnown RBP11.12□□□□□ -0.63
HMGN1P36-201ENST00000446623 RSF1Q96T23 1441 aaPredicted RBP11.11□□□□□ -0.63
HMGN1P36-201ENST00000446623 SPDYE4A6NLX3 237 aa11.11□□□□□ -0.63
HMGN1P36-201ENST00000446623 PITPNM1O00562 1244 aa11.1□□□□□ -0.63
HMGN1P36-201ENST00000446623 PRDM2Q13029 1718 aa11.07□□□□□ -0.64
HMGN1P36-201ENST00000446623 RIMBP3CA6NJZ7 1639 aa11.06□□□□□ -0.64
HMGN1P36-201ENST00000446623 RIMBP3BA6NNM3 1639 aa11.06□□□□□ -0.64
HMGN1P36-201ENST00000446623 RIMBP3Q9UFD9 1639 aa11.06□□□□□ -0.64
HMGN1P36-201ENST00000446623 CLEC11AQ9Y240 323 aa11.06□□□□□ -0.64
HMGN1P36-201ENST00000446623 ZNF608Q9ULD9 1512 aaPredicted RBP11.04□□□□□ -0.64
HMGN1P36-201ENST00000446623 POTEHQ6S545 545 aa11.03□□□□□ -0.64
HMGN1P36-201ENST00000446623 IFT140Q96RY7 1462 aa11.02□□□□□ -0.65
HMGN1P36-201ENST00000446623 ARHGEF11O15085 1522 aa11.01□□□□□ -0.65
HMGN1P36-201ENST00000446623 SPDYE1Q8NFV5 336 aaPredicted RBP11.01□□□□□ -0.65
HMGN1P36-201ENST00000446623 CCDC88BA6NC98 1476 aa11□□□□□ -0.65
HMGN1P36-201ENST00000446623 TOPBP1Q92547 1522 aa10.99□□□□□ -0.65
HMGN1P36-201ENST00000446623 EIF4G3O43432 1585 aaKnown RBP10.98□□□□□ -0.65
HMGN1P36-201ENST00000446623 FKBP8Q14318 412 aa10.94□□□□□ -0.66
HMGN1P36-201ENST00000446623 PIP4P2Q8N4L2 257 aa10.94□□□□□ -0.66
HMGN1P36-201ENST00000446623 ABCC8Q09428 1581 aa10.94□□□□□ -0.66
HMGN1P36-201ENST00000446623 DNMBPQ6XZF7 1577 aa10.94□□□□□ -0.66
HMGN1P36-201ENST00000446623 CHD1O14646 1710 aa10.93□□□□□ -0.66
HMGN1P36-201ENST00000446623 TARBP1Q13395 1621 aaKnown RBP10.92□□□□□ -0.66
HMGN1P36-201ENST00000446623 CYB5RLQ6IPT4 315 aa10.92□□□□□ -0.66
HMGN1P36-201ENST00000446623 AQRO60306 1485 aaKnown RBP eCLIP10.91□□□□□ -0.66
HMGN1P36-201ENST00000446623 FXR2P51116 673 aaKnown RBP eCLIP10.89□□□□□ -0.67
HMGN1P36-201ENST00000446623 ARAP1Q96P48 1450 aa10.88□□□□□ -0.67
HMGN1P36-201ENST00000446623 PRR29P0C7W0 189 aa10.88□□□□□ -0.67
HMGN1P36-201ENST00000446623 POLA1P09884 1462 aaPredicted RBP10.87□□□□□ -0.67
HMGN1P36-201ENST00000446623 RAD54L2Q9Y4B4 1467 aa10.83□□□□□ -0.68
HMGN1P36-201ENST00000446623 PRKAR2AP13861 404 aaKnown RBP10.82□□□□□ -0.68
HMGN1P36-201ENST00000446623 CHADLQ6NUI6 762 aa10.82□□□□□ -0.68
HMGN1P36-201ENST00000446623 PROM2Q8N271 834 aa10.82□□□□□ -0.68
HMGN1P36-201ENST00000446623 TDRD9Q8NDG6 1382 aaKnown RBP10.81□□□□□ -0.68
HMGN1P36-201ENST00000446623 STAG3Q9UJ98 1225 aa10.8□□□□□ -0.68
HMGN1P36-201ENST00000446623 SOGA1O94964 1423 aa10.8□□□□□ -0.68
HMGN1P36-201ENST00000446623 CLASP1Q7Z460 1538 aa10.79□□□□□ -0.68
HMGN1P36-201ENST00000446623 WDR97A6NE52 1622 aa10.79□□□□□ -0.68
HMGN1P36-201ENST00000446623 SNAPC4Q5SXM2 1469 aa10.79□□□□□ -0.68
HMGN1P36-201ENST00000446623 FGD5Q6ZNL6 1462 aa10.77□□□□□ -0.69
HMGN1P36-201ENST00000446623 SYNJ1O43426 1573 aa10.76□□□□□ -0.69
HMGN1P36-201ENST00000446623 MAGI1Q96QZ7 1491 aaPredicted RBP10.75□□□□□ -0.69
HMGN1P36-201ENST00000446623 CHMP7Q8WUX9 453 aaPredicted RBP10.74□□□□□ -0.69
HMGN1P36-201ENST00000446623 GRIN2BQ13224 1484 aa10.74□□□□□ -0.69
HMGN1P36-201ENST00000446623 CUX1P39880 1505 aa10.74□□□□□ -0.69
HMGN1P36-201ENST00000446623 SYNJ2O15056 1496 aa10.73□□□□□ -0.69
HMGN1P36-201ENST00000446623 PBRM1Q86U86 1689 aa10.7□□□□□ -0.7
HMGN1P36-201ENST00000446623 GAPVD1Q14C86 1478 aa10.68□□□□□ -0.7
HMGN1P36-201ENST00000446623 CREBZFQ9NS37 354 aa10.68□□□□□ -0.7
HMGN1P36-201ENST00000446623 HAX1O00165 279 aa10.67□□□□□ -0.7
HMGN1P36-201ENST00000446623 ABCA5Q8WWZ7 1642 aa10.66□□□□□ -0.7
HMGN1P36-201ENST00000446623 ABCA10Q8WWZ4 1543 aa10.63□□□□□ -0.71
HMGN1P36-201ENST00000446623 FARP1Q9Y4F1 1045 aaPredicted RBP10.63□□□□□ -0.71
HMGN1P36-201ENST00000446623 ERCC6L2Q5T890 1561 aa10.62□□□□□ -0.71
HMGN1P36-201ENST00000446623 GRIN2AQ12879 1464 aa10.61□□□□□ -0.71
HMGN1P36-201ENST00000446623 ADAMTS12P58397 1594 aa10.59□□□□□ -0.71
HMGN1P36-201ENST00000446623 CEP170Q5SW79 1584 aa10.58□□□□□ -0.72
HMGN1P36-201ENST00000446623 EVX2Q03828 476 aa10.58□□□□□ -0.72
HMGN1P36-201ENST00000446623 MIER1Q8N108 512 aa10.58□□□□□ -0.72
HMGN1P36-201ENST00000446623 NUP160Q12769 1436 aa10.57□□□□□ -0.72
HMGN1P36-201ENST00000446623 SHROOM2Q13796 1616 aa10.56□□□□□ -0.72
HMGN1P36-201ENST00000446623 WRNQ14191 1432 aaPredicted RBP eCLIP10.56□□□□□ -0.72
HMGN1P36-201ENST00000446623 PLCD3Q8N3E9 789 aa10.54□□□□□ -0.72
HMGN1P36-201ENST00000446623 C19orf67A6NJJ6 358 aa10.53□□□□□ -0.72
HMGN1P36-201ENST00000446623 FBXO3Q9UK99 471 aa10.53□□□□□ -0.72
HMGN1P36-201ENST00000446623 TOP2BQ02880 1626 aa10.53□□□□□ -0.72
HMGN1P36-201ENST00000446623 BIVM-ERCC5R4GMW8 1640 aa10.53□□□□□ -0.72
HMGN1P36-201ENST00000446623 FHAD1B1AJZ9 1412 aa10.52□□□□□ -0.73
HMGN1P36-201ENST00000446623 KIF13AQ9H1H9 1805 aa10.52□□□□□ -0.73
HMGN1P36-201ENST00000446623 MNX1P50219 401 aaPredicted RBP10.52□□□□□ -0.73
HMGN1P36-201ENST00000446623 ERICH3Q5RHP9 1530 aa10.5□□□□□ -0.73
HMGN1P36-201ENST00000446623 PLEKHG5O94827 1062 aa10.5□□□□□ -0.73
HMGN1P36-201ENST00000446623 CD44P16070 742 aaKnown RBP10.5□□□□□ -0.73
HMGN1P36-201ENST00000446623 PRG4Q92954 1404 aaPredicted RBP10.49□□□□□ -0.73
HMGN1P36-201ENST00000446623 SP7Q8TDD2 431 aaPredicted RBP10.48□□□□□ -0.73
HMGN1P36-201ENST00000446623 SUPT5HO00267 1087 aaKnown RBP10.47□□□□□ -0.73
HMGN1P36-201ENST00000446623 NPM1P06748 294 aaKnown RBP eCLIP10.47□□□□□ -0.73
HMGN1P36-201ENST00000446623 RUSC2Q8N2Y8 1516 aa10.44□□□□□ -0.74
HMGN1P36-201ENST00000446623 VASPP50552 380 aaPredicted RBP10.43□□□□□ -0.74
HMGN1P36-201ENST00000446623 JPH4Q96JJ6 628 aa10.43□□□□□ -0.74
HMGN1P36-201ENST00000446623 ABCC10Q5T3U5 1492 aa10.42□□□□□ -0.74
HMGN1P36-201ENST00000446623 ZRANB1Q9UGI0 708 aa10.42□□□□□ -0.74
HMGN1P36-201ENST00000446623 DIP2BQ9P265 1576 aa10.41□□□□□ -0.74
HMGN1P36-201ENST00000446623 FAM69CQ0P6D2 419 aa10.41□□□□□ -0.74
HMGN1P36-201ENST00000446623 MAPKBP1O60336 1514 aa10.41□□□□□ -0.74
HMGN1P36-201ENST00000446623 ADCY10Q96PN6 1610 aa10.4□□□□□ -0.74
HMGN1P36-201ENST00000446623 TSPYL2Q9H2G4 693 aaPredicted RBP10.37□□□□□ -0.75
HMGN1P36-201ENST00000446623 PAK3O75914 559 aaPredicted RBP10.36□□□□□ -0.75
HMGN1P36-201ENST00000446623 ZBTB47Q9UFB7 747 aaPredicted RBP10.36□□□□□ -0.75
HMGN1P36-201ENST00000446623 KDM6BO15054 1643 aa10.36□□□□□ -0.75
HMGN1P36-201ENST00000446623 KIAA0586Q9BVV6 1533 aa10.35□□□□□ -0.75
HMGN1P36-201ENST00000446623 KLHL34Q8N239 644 aa10.35□□□□□ -0.75
HMGN1P36-201ENST00000446623 TSPOAP1O95153 1857 aa10.34□□□□□ -0.75
HMGN1P36-201ENST00000446623 KDM4FA0A1W2PPD8 638 aa10.33□□□□□ -0.76
HMGN1P36-201ENST00000446623 RASEFQ8IZ41 740 aa10.33□□□□□ -0.76
HMGN1P36-201ENST00000446623 CUL7Q14999 1698 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms