RNA–Protein interactions for RNA: ENST00000442250.5

ITGA6-206, Transcript of integrin subunit alpha 6, humanhuman

TSL 5 BASIC

Gene ITGA6, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-206ENST00000442250 BIVM-ERCC5R4GMW8 1640 aa13.74□□□□□ -0.21
ITGA6-206ENST00000442250 FAM50AQ14320 339 aaKnown RBP13.74□□□□□ -0.21
ITGA6-206ENST00000442250 LAMC3Q9Y6N6 1575 aa13.73□□□□□ -0.21
ITGA6-206ENST00000442250 KIF21AQ7Z4S6 1674 aa13.72□□□□□ -0.21
ITGA6-206ENST00000442250 PRXQ9BXM0 1461 aa13.72□□□□□ -0.21
ITGA6-206ENST00000442250 DNMBPQ6XZF7 1577 aa13.71□□□□□ -0.21
ITGA6-206ENST00000442250 GAPVD1Q14C86 1478 aa13.71□□□□□ -0.22
ITGA6-206ENST00000442250 ZNF608Q9ULD9 1512 aaPredicted RBP13.7□□□□□ -0.22
ITGA6-206ENST00000442250 FHOD3Q2V2M9 1422 aa13.69□□□□□ -0.22
ITGA6-206ENST00000442250 VPS8Q8N3P4 1428 aa13.66□□□□□ -0.22
ITGA6-206ENST00000442250 ARAP1Q96P48 1450 aa13.66□□□□□ -0.22
ITGA6-206ENST00000442250 ANP32EQ9BTT0 268 aa13.65□□□□□ -0.22
ITGA6-206ENST00000442250 MRC2Q9UBG0 1479 aa13.65□□□□□ -0.22
ITGA6-206ENST00000442250 KIF21BO75037 1637 aa13.65□□□□□ -0.22
ITGA6-206ENST00000442250 BCANQ96GW7 911 aa13.64□□□□□ -0.23
ITGA6-206ENST00000442250 SUPT16HQ9Y5B9 1047 aaKnown RBP13.63□□□□□ -0.23
ITGA6-206ENST00000442250 ABCA10Q8WWZ4 1543 aa13.61□□□□□ -0.23
ITGA6-206ENST00000442250 TSHZ2Q9NRE2 1034 aa13.6□□□□□ -0.23
ITGA6-206ENST00000442250 ARHGAP35Q9NRY4 1499 aa13.6□□□□□ -0.23
ITGA6-206ENST00000442250 PRDM2Q13029 1718 aa13.55□□□□□ -0.24
ITGA6-206ENST00000442250 CHIC2Q9UKJ5 165 aa13.54□□□□□ -0.24
ITGA6-206ENST00000442250 ZNF777Q9ULD5 760 aaPredicted RBP13.53□□□□□ -0.24
ITGA6-206ENST00000442250 ERICH3Q5RHP9 1530 aa13.53□□□□□ -0.24
ITGA6-206ENST00000442250 SNAPC4Q5SXM2 1469 aa13.51□□□□□ -0.25
ITGA6-206ENST00000442250 MTUS2Q5JR59 1369 aa13.5□□□□□ -0.25
ITGA6-206ENST00000442250 JPH4Q96JJ6 628 aa13.49□□□□□ -0.25
ITGA6-206ENST00000442250 GRIN2BQ13224 1484 aa13.48□□□□□ -0.25
ITGA6-206ENST00000442250 IFT140Q96RY7 1462 aa13.47□□□□□ -0.25
ITGA6-206ENST00000442250 FHAD1B1AJZ9 1412 aa13.45□□□□□ -0.26
ITGA6-206ENST00000442250 KCNH8Q96L42 1107 aa13.44□□□□□ -0.26
ITGA6-206ENST00000442250 RRP7BPQ9NSQ0 103 aa13.42□□□□□ -0.26
ITGA6-206ENST00000442250 TARBP1Q13395 1621 aaKnown RBP13.41□□□□□ -0.26
ITGA6-206ENST00000442250 PHLDB1Q86UU1 1377 aa13.39□□□□□ -0.27
ITGA6-206ENST00000442250 CCNB3Q8WWL7 1395 aa13.38□□□□□ -0.27
ITGA6-206ENST00000442250 FKBP8Q14318 412 aa13.38□□□□□ -0.27
ITGA6-206ENST00000442250 TRIM52Q96A61 297 aa13.38□□□□□ -0.27
ITGA6-206ENST00000442250 WDR62O43379 1518 aa13.37□□□□□ -0.27
ITGA6-206ENST00000442250 ABCA5Q8WWZ7 1642 aa13.36□□□□□ -0.27
ITGA6-206ENST00000442250 FMN1Q68DA7 1419 aa13.35□□□□□ -0.27
ITGA6-206ENST00000442250 EIF4G3O43432 1585 aaKnown RBP13.35□□□□□ -0.27
ITGA6-206ENST00000442250 ZNF644Q9H582 1327 aaPredicted RBP13.33□□□□□ -0.27
ITGA6-206ENST00000442250 MYT1LQ9UL68 1186 aa13.33□□□□□ -0.28
ITGA6-206ENST00000442250 CUL7Q14999 1698 aa13.33□□□□□ -0.28
ITGA6-206ENST00000442250 PCF11O94913 1555 aaKnown RBP13.33□□□□□ -0.28
ITGA6-206ENST00000442250 GRIN2AQ12879 1464 aa13.32□□□□□ -0.28
ITGA6-206ENST00000442250 CDK11AQ9UQ88 783 aaPredicted RBP13.31□□□□□ -0.28
ITGA6-206ENST00000442250 SIN3AQ96ST3 1273 aa13.31□□□□□ -0.28
ITGA6-206ENST00000442250 RBM19Q9Y4C8 960 aaKnown RBP13.3□□□□□ -0.28
ITGA6-206ENST00000442250 LRRC9Q6ZRR7 1453 aa13.3□□□□□ -0.28
ITGA6-206ENST00000442250 THOC2Q8NI27 1593 aaKnown RBP13.3□□□□□ -0.28
ITGA6-206ENST00000442250 CDK13Q14004 1512 aaKnown RBP13.3□□□□□ -0.28
ITGA6-206ENST00000442250 PLEKHD1A6NEE1 506 aa13.29□□□□□ -0.28
ITGA6-206ENST00000442250 PBRM1Q86U86 1689 aa13.29□□□□□ -0.28
ITGA6-206ENST00000442250 PLB1Q6P1J6 1458 aa13.27□□□□□ -0.28
ITGA6-206ENST00000442250 IQGAP2Q13576 1575 aa13.27□□□□□ -0.28
ITGA6-206ENST00000442250 CASKIN1Q8WXD9 1431 aa13.27□□□□□ -0.29
ITGA6-206ENST00000442250 WDR97A6NE52 1622 aa13.27□□□□□ -0.29
ITGA6-206ENST00000442250 ADAMTS12P58397 1594 aa13.27□□□□□ -0.29
ITGA6-206ENST00000442250 SYNJ2O15056 1496 aa13.27□□□□□ -0.29
ITGA6-206ENST00000442250 HIRIP3Q9BW71 556 aaPredicted RBP13.27□□□□□ -0.29
ITGA6-206ENST00000442250 CFDP1Q9UEE9 299 aaPredicted RBP13.27□□□□□ -0.29
ITGA6-206ENST00000442250 CLSPNQ9HAW4 1339 aa13.26□□□□□ -0.29
ITGA6-206ENST00000442250 PRG4Q92954 1404 aaPredicted RBP13.26□□□□□ -0.29
ITGA6-206ENST00000442250 FOXD1Q16676 465 aa13.26□□□□□ -0.29
ITGA6-206ENST00000442250 CARMIL2Q6F5E8 1435 aa13.25□□□□□ -0.29
ITGA6-206ENST00000442250 KIAA0586Q9BVV6 1533 aa13.25□□□□□ -0.29
ITGA6-206ENST00000442250 TIAM1Q13009 1591 aa13.25□□□□□ -0.29
ITGA6-206ENST00000442250 PRKCSHP14314 528 aaPredicted RBP13.24□□□□□ -0.29
ITGA6-206ENST00000442250 ERICH6Q7L0X2 663 aa13.24□□□□□ -0.29
ITGA6-206ENST00000442250 RAB3GAP2Q9H2M9 1393 aa13.23□□□□□ -0.29
ITGA6-206ENST00000442250 PTPRGP23470 1445 aa13.23□□□□□ -0.29
ITGA6-206ENST00000442250 NEFLP07196 543 aa13.22□□□□□ -0.29
ITGA6-206ENST00000442250 CTTNBP2Q8WZ74 1663 aa13.22□□□□□ -0.29
ITGA6-206ENST00000442250 MAGI1Q96QZ7 1491 aaPredicted RBP13.21□□□□□ -0.29
ITGA6-206ENST00000442250 EFCAB5A4FU69 1503 aa13.2□□□□□ -0.3
ITGA6-206ENST00000442250 FYCO1Q9BQS8 1478 aa13.2□□□□□ -0.3
ITGA6-206ENST00000442250 HNRNPMP52272 730 aaKnown RBP eCLIP13.19□□□□□ -0.31e-6■■■■□ 22.9
ITGA6-206ENST00000442250 MSH5O43196 834 aa13.18□□□□□ -0.3
ITGA6-206ENST00000442250 NCOA2Q15596 1464 aa13.18□□□□□ -0.3
ITGA6-206ENST00000442250 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.18□□□□□ -0.36e-8■■□□□ 12
ITGA6-206ENST00000442250 CEP170Q5SW79 1584 aa13.18□□□□□ -0.3
ITGA6-206ENST00000442250 CNGB1Q14028 1251 aaPredicted RBP13.17□□□□□ -0.3
ITGA6-206ENST00000442250 DISP1Q96F81 1524 aa13.16□□□□□ -0.3
ITGA6-206ENST00000442250 ZNF326Q5BKZ1 582 aaKnown RBP13.16□□□□□ -0.3
ITGA6-206ENST00000442250 EPRSP07814 1512 aaKnown RBP13.16□□□□□ -0.3
ITGA6-206ENST00000442250 IRX6P78412 446 aaPredicted RBP13.16□□□□□ -0.3
ITGA6-206ENST00000442250 CYB5RLQ6IPT4 315 aa13.16□□□□□ -0.3
ITGA6-206ENST00000442250 OSCARQ8IYS5 282 aa13.16□□□□□ -0.3
ITGA6-206ENST00000442250 FGD6Q6ZV73 1430 aa13.15□□□□□ -0.3
ITGA6-206ENST00000442250 DDX10Q13206 875 aaKnown RBP13.15□□□□□ -0.3
ITGA6-206ENST00000442250 RRBP1Q9P2E9 1410 aaKnown RBP13.14□□□□□ -0.31
ITGA6-206ENST00000442250 DHX57Q6P158 1386 aaKnown RBP13.14□□□□□ -0.31
ITGA6-206ENST00000442250 SETD5Q9C0A6 1442 aa13.13□□□□□ -0.31
ITGA6-206ENST00000442250 NPM1P06748 294 aaKnown RBP eCLIP13.11□□□□□ -0.31
ITGA6-206ENST00000442250 MAGI3Q5TCQ9 1506 aa13.1□□□□□ -0.31
ITGA6-206ENST00000442250 TSPY4P0CV99 314 aa13.1□□□□□ -0.31
ITGA6-206ENST00000442250 TSPY10P0CW01 314 aa13.1□□□□□ -0.31
ITGA6-206ENST00000442250 MYOM3Q5VTT5 1437 aa13.1□□□□□ -0.31
ITGA6-206ENST00000442250 NUP153P49790 1475 aaKnown RBP13.1□□□□□ -0.31
ITGA6-206ENST00000442250 SENP3Q9H4L4 574 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms