RNA–Protein interactions for RNA: ENST00000441892.6

CDH17-202, Transcript of cadherin 17, humanhuman

TSL 2 BASIC

Gene CDH17, Length 2,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-202ENST00000441892 RNF216Q9NWF9 866 aaPredicted RBP11.25□□□□□ -0.61
CDH17-202ENST00000441892 CADPSQ9ULU8 1353 aa11.24□□□□□ -0.61
CDH17-202ENST00000441892 LAMC3Q9Y6N6 1575 aa11.22□□□□□ -0.61
CDH17-202ENST00000441892 SALL2Q9Y467 1007 aaPredicted RBP11.22□□□□□ -0.61
CDH17-202ENST00000441892 CEP162Q5TB80 1403 aa11.22□□□□□ -0.61
CDH17-202ENST00000441892 CFTRP13569 1480 aa11.2□□□□□ -0.62
CDH17-202ENST00000441892 KIF21AQ7Z4S6 1674 aa11.2□□□□□ -0.62
CDH17-202ENST00000441892 TAOK2Q9UL54 1235 aa11.17□□□□□ -0.62
CDH17-202ENST00000441892 TNIKQ9UKE5 1360 aa11.16□□□□□ -0.62
CDH17-202ENST00000441892 ITGAEP38570 1179 aa11.16□□□□□ -0.62
CDH17-202ENST00000441892 CDK11AQ9UQ88 783 aaPredicted RBP11.16□□□□□ -0.62
CDH17-202ENST00000441892 ATXN8OSP0DMR3 200 aa11.15□□□□□ -0.62
CDH17-202ENST00000441892 HAP1P54257 671 aaPredicted RBP11.15□□□□□ -0.63
CDH17-202ENST00000441892 HNRNPUL2Q1KMD3 747 aaKnown RBP11.15□□□□□ -0.63
CDH17-202ENST00000441892 ERCC6Q03468 1493 aa11.15□□□□□ -0.63
CDH17-202ENST00000441892 PRDM2Q13029 1718 aa11.14□□□□□ -0.63
CDH17-202ENST00000441892 PDS5BQ9NTI5 1447 aa11.12□□□□□ -0.63
CDH17-202ENST00000441892 FANCD2Q9BXW9 1451 aa11.12□□□□□ -0.63
CDH17-202ENST00000441892 KCNH8Q96L42 1107 aa11.12□□□□□ -0.63
CDH17-202ENST00000441892 ATF5Q9Y2D1 282 aaPredicted RBP11.12□□□□□ -0.63
CDH17-202ENST00000441892 MYCNP04198 464 aaPredicted RBP11.1□□□□□ -0.63
CDH17-202ENST00000441892 CCDC136Q96JN2 1154 aa11.1□□□□□ -0.63
CDH17-202ENST00000441892 THOC2Q8NI27 1593 aaKnown RBP11.1□□□□□ -0.63
CDH17-202ENST00000441892 DHX57Q6P158 1386 aaKnown RBP11.07□□□□□ -0.64
CDH17-202ENST00000441892 CEP164Q9UPV0 1460 aa11.07□□□□□ -0.64
CDH17-202ENST00000441892 NOP58Q9Y2X3 529 aaKnown RBP11.06□□□□□ -0.64
CDH17-202ENST00000441892 URB2Q14146 1524 aaKnown RBP11.04□□□□□ -0.64
CDH17-202ENST00000441892 MRC2Q9UBG0 1479 aa11.03□□□□□ -0.64
CDH17-202ENST00000441892 CCER2I3L3R5 266 aa11.02□□□□□ -0.65
CDH17-202ENST00000441892 NBR1Q14596 966 aa11.01□□□□□ -0.65
CDH17-202ENST00000441892 TPRNQ4KMQ1 711 aa11.01□□□□□ -0.65
CDH17-202ENST00000441892 IL27Q8NEV9 243 aa11.01□□□□□ -0.65
CDH17-202ENST00000441892 WDR62O43379 1518 aa11□□□□□ -0.65
CDH17-202ENST00000441892 EEA1Q15075 1411 aa11□□□□□ -0.65
CDH17-202ENST00000441892 RTL5Q5HYW3 569 aaPredicted RBP11□□□□□ -0.65
CDH17-202ENST00000441892 EIF5BO60841 1220 aaKnown RBP11□□□□□ -0.65
CDH17-202ENST00000441892 HOXD11P31277 338 aaPredicted RBP11□□□□□ -0.65
CDH17-202ENST00000441892 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.99□□□□□ -0.65
CDH17-202ENST00000441892 ABCC8Q09428 1581 aa10.98□□□□□ -0.65
CDH17-202ENST00000441892 KDM2AQ9Y2K7 1162 aa10.97□□□□□ -0.65
CDH17-202ENST00000441892 TOPBP1Q92547 1522 aa10.97□□□□□ -0.65
CDH17-202ENST00000441892 TRIM52Q96A61 297 aa10.96□□□□□ -0.65
CDH17-202ENST00000441892 CUX2O14529 1486 aa10.96□□□□□ -0.65
CDH17-202ENST00000441892 CUX1P39880 1505 aa10.96□□□□□ -0.66
CDH17-202ENST00000441892 PKNOX2Q96KN3 472 aa10.96□□□□□ -0.66
CDH17-202ENST00000441892 GOLGA3Q08378 1498 aa10.95□□□□□ -0.66
CDH17-202ENST00000441892 C11orf95C9JLR9 678 aaPredicted RBP10.94□□□□□ -0.66
CDH17-202ENST00000441892 PAK3O75914 559 aaPredicted RBP10.94□□□□□ -0.66
CDH17-202ENST00000441892 UBTFP17480 764 aaKnown RBP10.94□□□□□ -0.66
CDH17-202ENST00000441892 PPP4R2Q9NY27 417 aa10.94□□□□□ -0.66
CDH17-202ENST00000441892 DNMBPQ6XZF7 1577 aa10.94□□□□□ -0.66
CDH17-202ENST00000441892 FBLN2P98095 1184 aa10.93□□□□□ -0.66
CDH17-202ENST00000441892 PPP1R15AO75807 674 aaPredicted RBP10.92□□□□□ -0.66
CDH17-202ENST00000441892 WASHC2AQ641Q2 1341 aa10.91□□□□□ -0.66
CDH17-202ENST00000441892 SYNJ1O43426 1573 aa10.91□□□□□ -0.66
CDH17-202ENST00000441892 DDX10Q13206 875 aaKnown RBP10.91□□□□□ -0.66
CDH17-202ENST00000441892 VPS8Q8N3P4 1428 aa10.91□□□□□ -0.66
CDH17-202ENST00000441892 SOGA1O94964 1423 aa10.9□□□□□ -0.67
CDH17-202ENST00000441892 ANP32CO43423 234 aa10.89□□□□□ -0.67
CDH17-202ENST00000441892 IPO9Q96P70 1041 aaKnown RBP10.89□□□□□ -0.67
CDH17-202ENST00000441892 CLIP1P30622 1438 aa10.88□□□□□ -0.67
CDH17-202ENST00000441892 POLA1P09884 1462 aaPredicted RBP10.88□□□□□ -0.67
CDH17-202ENST00000441892 RAD54L2Q9Y4B4 1467 aa10.88□□□□□ -0.67
CDH17-202ENST00000441892 TIMELESSQ9UNS1 1208 aa10.88□□□□□ -0.67
CDH17-202ENST00000441892 FGD5Q6ZNL6 1462 aa10.88□□□□□ -0.67
CDH17-202ENST00000441892 USP35Q9P2H5 1018 aa10.88□□□□□ -0.67
CDH17-202ENST00000441892 WASHC2CQ9Y4E1 1318 aa10.87□□□□□ -0.67
CDH17-202ENST00000441892 ANP32AP39687 249 aaKnown RBP10.87□□□□□ -0.67
CDH17-202ENST00000441892 TARBP1Q13395 1621 aaKnown RBP10.86□□□□□ -0.67
CDH17-202ENST00000441892 BIVM-ERCC5R4GMW8 1640 aa10.86□□□□□ -0.67
CDH17-202ENST00000441892 VSIG10Q8N0Z9 540 aa10.86□□□□□ -0.67
CDH17-202ENST00000441892 ZBTB47Q9UFB7 747 aaPredicted RBP10.86□□□□□ -0.67
CDH17-202ENST00000441892 TOP2BQ02880 1626 aa10.86□□□□□ -0.67
CDH17-202ENST00000441892 ZNF608Q9ULD9 1512 aaPredicted RBP10.86□□□□□ -0.67
CDH17-202ENST00000441892 IRX6P78412 446 aaPredicted RBP10.85□□□□□ -0.67
CDH17-202ENST00000441892 PKD2Q13563 968 aa10.84□□□□□ -0.67
CDH17-202ENST00000441892 DMRT2Q9Y5R5 561 aa10.84□□□□□ -0.67
CDH17-202ENST00000441892 RSPH6AQ9H0K4 717 aa10.82□□□□□ -0.68
CDH17-202ENST00000441892 IFNLR1Q8IU57 520 aaPredicted RBP10.82□□□□□ -0.68
CDH17-202ENST00000441892 IFT140Q96RY7 1462 aa10.82□□□□□ -0.68
CDH17-202ENST00000441892 AQRO60306 1485 aaKnown RBP eCLIP10.8□□□□□ -0.68
CDH17-202ENST00000441892 GLIPR1L2Q4G1C9 344 aa10.8□□□□□ -0.68
CDH17-202ENST00000441892 WDR97A6NE52 1622 aa10.8□□□□□ -0.68
CDH17-202ENST00000441892 HNRNPUQ00839 825 aaKnown RBP eCLIP10.8□□□□□ -0.68
CDH17-202ENST00000441892 TDRD9Q8NDG6 1382 aaKnown RBP10.79□□□□□ -0.68
CDH17-202ENST00000441892 RUSC2Q8N2Y8 1516 aa10.78□□□□□ -0.68
CDH17-202ENST00000441892 RRBP1Q9P2E9 1410 aaKnown RBP10.78□□□□□ -0.68
CDH17-202ENST00000441892 B4GALNT3Q6L9W6 998 aa10.78□□□□□ -0.68
CDH17-202ENST00000441892 KIF21BO75037 1637 aa10.78□□□□□ -0.68
CDH17-202ENST00000441892 EIF4G3O43432 1585 aaKnown RBP10.78□□□□□ -0.68
CDH17-202ENST00000441892 MAPKBP1O60336 1514 aa10.77□□□□□ -0.69
CDH17-202ENST00000441892 NEFMP07197 916 aa10.76□□□□□ -0.69
CDH17-202ENST00000441892 ABCA10Q8WWZ4 1543 aa10.75□□□□□ -0.69
CDH17-202ENST00000441892 VASPP50552 380 aaPredicted RBP10.75□□□□□ -0.69
CDH17-202ENST00000441892 DAXXQ9UER7 740 aaPredicted RBP10.75□□□□□ -0.69
CDH17-202ENST00000441892 TULP1O00294 542 aaPredicted RBP10.74□□□□□ -0.69
CDH17-202ENST00000441892 PPM1GO15355 546 aaPredicted RBP10.74□□□□□ -0.69
CDH17-202ENST00000441892 NPM1P06748 294 aaKnown RBP eCLIP10.73□□□□□ -0.69
CDH17-202ENST00000441892 BRPF3Q9ULD4 1205 aa10.73□□□□□ -0.69
CDH17-202ENST00000441892 ABCA5Q8WWZ7 1642 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms