RNA–Protein interactions for RNA: ENST00000441730.2

BRPF3-204, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 3,329 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-204ENST00000441730 ABCA10Q8WWZ4 1543 aa15.64■□□□□ 0.09
BRPF3-204ENST00000441730 SNAPC4Q5SXM2 1469 aa15.62■□□□□ 0.09
BRPF3-204ENST00000441730 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.61■□□□□ 0.09
BRPF3-204ENST00000441730 HNRNPUL2Q1KMD3 747 aaKnown RBP15.61■□□□□ 0.09
BRPF3-204ENST00000441730 EEA1Q15075 1411 aa15.6■□□□□ 0.09
BRPF3-204ENST00000441730 GRIN2BQ13224 1484 aa15.6■□□□□ 0.09
BRPF3-204ENST00000441730 TARBP1Q13395 1621 aaKnown RBP15.55■□□□□ 0.08
BRPF3-204ENST00000441730 GOLGA3Q08378 1498 aa15.55■□□□□ 0.08
BRPF3-204ENST00000441730 OSCARQ8IYS5 282 aa15.54■□□□□ 0.08
BRPF3-204ENST00000441730 GTF3C3Q9Y5Q9 886 aa15.54■□□□□ 0.08
BRPF3-204ENST00000441730 EIF4G3O43432 1585 aaKnown RBP15.52■□□□□ 0.08
BRPF3-204ENST00000441730 JPH4Q96JJ6 628 aa15.51■□□□□ 0.07
BRPF3-204ENST00000441730 PODXL2Q9NZ53 605 aa15.5■□□□□ 0.07
BRPF3-204ENST00000441730 FHAD1B1AJZ9 1412 aa15.49■□□□□ 0.07
BRPF3-204ENST00000441730 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
BRPF3-204ENST00000441730 PRXQ9BXM0 1461 aa15.46■□□□□ 0.07
BRPF3-204ENST00000441730 CLIP1P30622 1438 aa15.46■□□□□ 0.06
BRPF3-204ENST00000441730 CEP162Q5TB80 1403 aa15.45■□□□□ 0.06
BRPF3-204ENST00000441730 TNIKQ9UKE5 1360 aa15.43■□□□□ 0.06
BRPF3-204ENST00000441730 ANO8Q9HCE9 1232 aaPredicted RBP15.43■□□□□ 0.06
BRPF3-204ENST00000441730 NEUROD1Q13562 356 aa15.42■□□□□ 0.06
BRPF3-204ENST00000441730 CYB5RLQ6IPT4 315 aa15.42■□□□□ 0.06
BRPF3-204ENST00000441730 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
BRPF3-204ENST00000441730 ABCA5Q8WWZ7 1642 aa15.4■□□□□ 0.06
BRPF3-204ENST00000441730 ERICH3Q5RHP9 1530 aa15.4■□□□□ 0.06
BRPF3-204ENST00000441730 GRIN2AQ12879 1464 aa15.39■□□□□ 0.05
BRPF3-204ENST00000441730 FHOD3Q2V2M9 1422 aa15.38■□□□□ 0.05
BRPF3-204ENST00000441730 MAGI1Q96QZ7 1491 aaPredicted RBP15.38■□□□□ 0.05
BRPF3-204ENST00000441730 PBRM1Q86U86 1689 aa15.34■□□□□ 0.05
BRPF3-204ENST00000441730 WDR97A6NE52 1622 aa15.32■□□□□ 0.04
BRPF3-204ENST00000441730 PKNOX2Q96KN3 472 aa15.32■□□□□ 0.04
BRPF3-204ENST00000441730 ADAMTS12P58397 1594 aa15.31■□□□□ 0.04
BRPF3-204ENST00000441730 PRG4Q92954 1404 aaPredicted RBP15.31■□□□□ 0.04
BRPF3-204ENST00000441730 KCNH8Q96L42 1107 aa15.3■□□□□ 0.04
BRPF3-204ENST00000441730 PCGF6Q9BYE7 350 aa15.3■□□□□ 0.04
BRPF3-204ENST00000441730 KIF21BO75037 1637 aa15.29■□□□□ 0.04
BRPF3-204ENST00000441730 ITGAEP38570 1179 aa15.28■□□□□ 0.04
BRPF3-204ENST00000441730 ZEB1P37275 1124 aaPredicted RBP15.28■□□□□ 0.04
BRPF3-204ENST00000441730 CUL7Q14999 1698 aa15.27■□□□□ 0.03
BRPF3-204ENST00000441730 KIAA0586Q9BVV6 1533 aa15.24■□□□□ 0.03
BRPF3-204ENST00000441730 CARMIL2Q6F5E8 1435 aa15.24■□□□□ 0.03
BRPF3-204ENST00000441730 NPM1P06748 294 aaKnown RBP eCLIP15.23■□□□□ 0.03
BRPF3-204ENST00000441730 CHD1O14646 1710 aa15.23■□□□□ 0.03
BRPF3-204ENST00000441730 PTPRGP23470 1445 aa15.23■□□□□ 0.03
BRPF3-204ENST00000441730 ARHGAP35Q9NRY4 1499 aa15.22■□□□□ 0.03
BRPF3-204ENST00000441730 CEP170Q5SW79 1584 aa15.22■□□□□ 0.03
BRPF3-204ENST00000441730 ARAP1Q96P48 1450 aa15.22■□□□□ 0.03
BRPF3-204ENST00000441730 ARXQ96QS3 562 aa15.22■□□□□ 0.03
BRPF3-204ENST00000441730 KANK4Q5T7N3 995 aaPredicted RBP15.21■□□□□ 0.03
BRPF3-204ENST00000441730 IQGAP2Q13576 1575 aa15.19■□□□□ 0.02
BRPF3-204ENST00000441730 NUP160Q12769 1436 aa15.18■□□□□ 0.02
BRPF3-204ENST00000441730 ZNF777Q9ULD5 760 aaPredicted RBP15.17■□□□□ 0.02
BRPF3-204ENST00000441730 ERCC6L2Q5T890 1561 aa15.14■□□□□ 0.01
BRPF3-204ENST00000441730 FAM50AQ14320 339 aaKnown RBP15.14■□□□□ 0.01
BRPF3-204ENST00000441730 KLHL34Q8N239 644 aa15.13■□□□□ 0.01
BRPF3-204ENST00000441730 PLB1Q6P1J6 1458 aa15.13■□□□□ 0.01
BRPF3-204ENST00000441730 TRHP20396 242 aaPredicted RBP15.13■□□□□ 0.01
BRPF3-204ENST00000441730 PLEKHD1A6NEE1 506 aa15.12■□□□□ 0.01
BRPF3-204ENST00000441730 VPS8Q8N3P4 1428 aa15.12■□□□□ 0.01
BRPF3-204ENST00000441730 MTUS2Q5JR59 1369 aa15.11■□□□□ 0.01
BRPF3-204ENST00000441730 MYT1LQ9UL68 1186 aa15.1■□□□□ 0.01
BRPF3-204ENST00000441730 CDK11AQ9UQ88 783 aaPredicted RBP15.09■□□□□ 0.01
BRPF3-204ENST00000441730 FMN1Q68DA7 1419 aa15.08■□□□□ 0
BRPF3-204ENST00000441730 DISP1Q96F81 1524 aa15.07■□□□□ 0
BRPF3-204ENST00000441730 CTTNBP2Q8WZ74 1663 aa15.05■□□□□ -0
BRPF3-204ENST00000441730 NEFLP07196 543 aa15.04■□□□□ -0
BRPF3-204ENST00000441730 SALL2Q9Y467 1007 aaPredicted RBP15.02■□□□□ -0
BRPF3-204ENST00000441730 DNAJC5Q9H3Z4 198 aa15.01□□□□□ -0.01
BRPF3-204ENST00000441730 CDK13Q14004 1512 aaKnown RBP15□□□□□ -0.01
BRPF3-204ENST00000441730 ERICH6BQ5W0A0 696 aa15□□□□□ -0.01
BRPF3-204ENST00000441730 CHIC2Q9UKJ5 165 aa14.99□□□□□ -0.01
BRPF3-204ENST00000441730 UGGT2Q9NYU1 1516 aa14.99□□□□□ -0.01
BRPF3-204ENST00000441730 ARHGEF11O15085 1522 aa14.98□□□□□ -0.01
BRPF3-204ENST00000441730 KIAA0556O60303 1618 aa14.98□□□□□ -0.01
BRPF3-204ENST00000441730 PDIA4P13667 645 aaKnown RBP14.98□□□□□ -0.01
BRPF3-204ENST00000441730 UACAQ9BZF9 1416 aa14.98□□□□□ -0.01
BRPF3-204ENST00000441730 EFCAB5A4FU69 1503 aa14.96□□□□□ -0.02
BRPF3-204ENST00000441730 FAM69CQ0P6D2 419 aa14.95□□□□□ -0.02
BRPF3-204ENST00000441730 TRIM26Q12899 539 aaPredicted RBP14.95□□□□□ -0.02
BRPF3-204ENST00000441730 CCDC136Q96JN2 1154 aa14.95□□□□□ -0.02
BRPF3-204ENST00000441730 PCF11O94913 1555 aaKnown RBP14.94□□□□□ -0.02
BRPF3-204ENST00000441730 CLASP1Q7Z460 1538 aa14.94□□□□□ -0.02
BRPF3-204ENST00000441730 CFDP1Q9UEE9 299 aaPredicted RBP14.94□□□□□ -0.02
BRPF3-204ENST00000441730 CASKIN1Q8WXD9 1431 aa14.93□□□□□ -0.02
BRPF3-204ENST00000441730 PDE4CQ08493 712 aa14.93□□□□□ -0.02
BRPF3-204ENST00000441730 TIMELESSQ9UNS1 1208 aa14.92□□□□□ -0.02
BRPF3-204ENST00000441730 ZNF644Q9H582 1327 aaPredicted RBP14.92□□□□□ -0.02
BRPF3-204ENST00000441730 PLPPR3Q6T4P5 718 aa14.91□□□□□ -0.02
BRPF3-204ENST00000441730 RTN4Q9NQC3 1192 aaKnown RBP14.9□□□□□ -0.02
BRPF3-204ENST00000441730 NUP153P49790 1475 aaKnown RBP14.89□□□□□ -0.03
BRPF3-204ENST00000441730 EPRSP07814 1512 aaKnown RBP14.89□□□□□ -0.03
BRPF3-204ENST00000441730 ATP10BO94823 1461 aa14.88□□□□□ -0.03
BRPF3-204ENST00000441730 SAMD9Q5K651 1589 aa14.88□□□□□ -0.03
BRPF3-204ENST00000441730 CCNB3Q8WWL7 1395 aa14.87□□□□□ -0.03
BRPF3-204ENST00000441730 HNRNPMP52272 730 aaKnown RBP eCLIP14.86□□□□□ -0.03
BRPF3-204ENST00000441730 FYCO1Q9BQS8 1478 aa14.85□□□□□ -0.03
BRPF3-204ENST00000441730 RRP7BPQ9NSQ0 103 aa14.84□□□□□ -0.03
BRPF3-204ENST00000441730 RIMBP3CA6NJZ7 1639 aa14.84□□□□□ -0.03
BRPF3-204ENST00000441730 RIMBP3BA6NNM3 1639 aa14.84□□□□□ -0.03
BRPF3-204ENST00000441730 RIMBP3Q9UFD9 1639 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms