RNA–Protein interactions for RNA: ENST00000441127.5

THUMPD3-205, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-205ENST00000441127 CCDC88BA6NC98 1476 aa12.47□□□□□ -0.41
THUMPD3-205ENST00000441127 ERCC6Q03468 1493 aa12.47□□□□□ -0.41
THUMPD3-205ENST00000441127 STAG3Q9UJ98 1225 aa12.47□□□□□ -0.41
THUMPD3-205ENST00000441127 CADPSQ9ULU8 1353 aa12.46□□□□□ -0.41
THUMPD3-205ENST00000441127 FXR2P51116 673 aaKnown RBP eCLIP12.45□□□□□ -0.42
THUMPD3-205ENST00000441127 PIP4P2Q8N4L2 257 aa12.42□□□□□ -0.42
THUMPD3-205ENST00000441127 PDS5BQ9NTI5 1447 aa12.42□□□□□ -0.42
THUMPD3-205ENST00000441127 PRR29P0C7W0 189 aa12.4□□□□□ -0.42
THUMPD3-205ENST00000441127 CFTRP13569 1480 aa12.4□□□□□ -0.43
THUMPD3-205ENST00000441127 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
THUMPD3-205ENST00000441127 CREBZFQ9NS37 354 aa12.38□□□□□ -0.43
THUMPD3-205ENST00000441127 FANCD2Q9BXW9 1451 aa12.34□□□□□ -0.43
THUMPD3-205ENST00000441127 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
THUMPD3-205ENST00000441127 VASPP50552 380 aaPredicted RBP12.34□□□□□ -0.43
THUMPD3-205ENST00000441127 KIF21AQ7Z4S6 1674 aa12.34□□□□□ -0.43
THUMPD3-205ENST00000441127 CEP164Q9UPV0 1460 aa12.34□□□□□ -0.43
THUMPD3-205ENST00000441127 CHADLQ6NUI6 762 aa12.32□□□□□ -0.44
THUMPD3-205ENST00000441127 MNX1P50219 401 aaPredicted RBP12.3□□□□□ -0.44
THUMPD3-205ENST00000441127 PRKAR2AP13861 404 aaKnown RBP12.29□□□□□ -0.44
THUMPD3-205ENST00000441127 MRC2Q9UBG0 1479 aa12.27□□□□□ -0.44
THUMPD3-205ENST00000441127 THOC2Q8NI27 1593 aaKnown RBP12.25□□□□□ -0.45
THUMPD3-205ENST00000441127 CUX2O14529 1486 aa12.22□□□□□ -0.45
THUMPD3-205ENST00000441127 IFNLR1Q8IU57 520 aaPredicted RBP12.22□□□□□ -0.45
THUMPD3-205ENST00000441127 MIER1Q8N108 512 aa12.22□□□□□ -0.45
THUMPD3-205ENST00000441127 WDR62O43379 1518 aa12.2□□□□□ -0.46
THUMPD3-205ENST00000441127 PLCD3Q8N3E9 789 aa12.18□□□□□ -0.46
THUMPD3-205ENST00000441127 FARP1Q9Y4F1 1045 aaPredicted RBP12.18□□□□□ -0.46
THUMPD3-205ENST00000441127 URB2Q14146 1524 aaKnown RBP12.17□□□□□ -0.46
THUMPD3-205ENST00000441127 ABCC8Q09428 1581 aa12.16□□□□□ -0.46
THUMPD3-205ENST00000441127 DNMBPQ6XZF7 1577 aa12.15□□□□□ -0.46
THUMPD3-205ENST00000441127 TOPBP1Q92547 1522 aa12.14□□□□□ -0.47
THUMPD3-205ENST00000441127 WRNQ14191 1432 aaPredicted RBP eCLIP12.1□□□□□ -0.47
THUMPD3-205ENST00000441127 CUX1P39880 1505 aa12.08□□□□□ -0.48
THUMPD3-205ENST00000441127 NUBP1P53384 320 aa12.07□□□□□ -0.48
THUMPD3-205ENST00000441127 POLA1P09884 1462 aaPredicted RBP12.05□□□□□ -0.48
THUMPD3-205ENST00000441127 FGD5Q6ZNL6 1462 aa12.05□□□□□ -0.48
THUMPD3-205ENST00000441127 IFT140Q96RY7 1462 aa12.05□□□□□ -0.48
THUMPD3-205ENST00000441127 C19orf67A6NJJ6 358 aa12.03□□□□□ -0.48
THUMPD3-205ENST00000441127 PLEKHG5O94827 1062 aa12.03□□□□□ -0.48
THUMPD3-205ENST00000441127 SYNJ1O43426 1573 aa12.02□□□□□ -0.49
THUMPD3-205ENST00000441127 TOP2BQ02880 1626 aa12.02□□□□□ -0.49
THUMPD3-205ENST00000441127 RASEFQ8IZ41 740 aa12.02□□□□□ -0.49
THUMPD3-205ENST00000441127 ZBTB47Q9UFB7 747 aaPredicted RBP12.01□□□□□ -0.49
THUMPD3-205ENST00000441127 SOGA1O94964 1423 aa12.01□□□□□ -0.49
THUMPD3-205ENST00000441127 BIVM-ERCC5R4GMW8 1640 aa12□□□□□ -0.49
THUMPD3-205ENST00000441127 NPM1P06748 294 aaKnown RBP eCLIP12□□□□□ -0.49
THUMPD3-205ENST00000441127 EVX2Q03828 476 aa12□□□□□ -0.49
THUMPD3-205ENST00000441127 KLHL34Q8N239 644 aa12□□□□□ -0.49
THUMPD3-205ENST00000441127 RAD54L2Q9Y4B4 1467 aa12□□□□□ -0.49
THUMPD3-205ENST00000441127 SPOCK2Q92563 424 aa11.98□□□□□ -0.49
THUMPD3-205ENST00000441127 TARBP1Q13395 1621 aaKnown RBP11.97□□□□□ -0.49
THUMPD3-205ENST00000441127 ZNF608Q9ULD9 1512 aaPredicted RBP11.96□□□□□ -0.5
THUMPD3-205ENST00000441127 EIF4G3O43432 1585 aaKnown RBP11.94□□□□□ -0.5
THUMPD3-205ENST00000441127 TDRD9Q8NDG6 1382 aaKnown RBP11.93□□□□□ -0.5
THUMPD3-205ENST00000441127 CD44P16070 742 aaKnown RBP11.93□□□□□ -0.5
THUMPD3-205ENST00000441127 TRIM41Q8WV44 630 aa11.93□□□□□ -0.5
THUMPD3-205ENST00000441127 ABCA10Q8WWZ4 1543 aa11.92□□□□□ -0.5
THUMPD3-205ENST00000441127 AQRO60306 1485 aaKnown RBP eCLIP11.92□□□□□ -0.58e-7■■■□□ 16.1
THUMPD3-205ENST00000441127 WDR97A6NE52 1622 aa11.91□□□□□ -0.5
THUMPD3-205ENST00000441127 HAX1O00165 279 aa11.91□□□□□ -0.5
THUMPD3-205ENST00000441127 GAPVD1Q14C86 1478 aa11.89□□□□□ -0.51
THUMPD3-205ENST00000441127 CCDC61Q9Y6R9 512 aa11.88□□□□□ -0.51
THUMPD3-205ENST00000441127 GRIN2BQ13224 1484 aa11.87□□□□□ -0.51
THUMPD3-205ENST00000441127 TSPYL2Q9H2G4 693 aaPredicted RBP11.85□□□□□ -0.51
THUMPD3-205ENST00000441127 ABCA5Q8WWZ7 1642 aa11.85□□□□□ -0.51
THUMPD3-205ENST00000441127 KIF27Q86VH2 1401 aa11.85□□□□□ -0.51
THUMPD3-205ENST00000441127 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
THUMPD3-205ENST00000441127 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
THUMPD3-205ENST00000441127 SNAPC4Q5SXM2 1469 aa11.83□□□□□ -0.52
THUMPD3-205ENST00000441127 ZNF579Q8NAF0 562 aaKnown RBP11.83□□□□□ -0.52
THUMPD3-205ENST00000441127 FAM212AQ96EL1 285 aa11.83□□□□□ -0.52
THUMPD3-205ENST00000441127 MAGI1Q96QZ7 1491 aaPredicted RBP11.83□□□□□ -0.52
THUMPD3-205ENST00000441127 PKD2Q13563 968 aa11.81□□□□□ -0.52
THUMPD3-205ENST00000441127 CHMP7Q8WUX9 453 aaPredicted RBP11.8□□□□□ -0.52
THUMPD3-205ENST00000441127 PHF12Q96QT6 1004 aa11.8□□□□□ -0.52
THUMPD3-205ENST00000441127 DCAF8Q5TAQ9 597 aa11.79□□□□□ -0.52
THUMPD3-205ENST00000441127 ERICH3Q5RHP9 1530 aa11.79□□□□□ -0.52
THUMPD3-205ENST00000441127 GSE1Q14687 1217 aa11.78□□□□□ -0.52
THUMPD3-205ENST00000441127 CHD1O14646 1710 aa11.77□□□□□ -0.53
THUMPD3-205ENST00000441127 SYNJ2O15056 1496 aa11.76□□□□□ -0.53
THUMPD3-205ENST00000441127 PAK3O75914 559 aaPredicted RBP11.76□□□□□ -0.53
THUMPD3-205ENST00000441127 ADAMTS12P58397 1594 aa11.75□□□□□ -0.53
THUMPD3-205ENST00000441127 CIZ1Q9ULV3 898 aaPredicted RBP11.75□□□□□ -0.53
THUMPD3-205ENST00000441127 FHAD1B1AJZ9 1412 aa11.75□□□□□ -0.53
THUMPD3-205ENST00000441127 KIF12Q96FN5 646 aa11.74□□□□□ -0.53
THUMPD3-205ENST00000441127 CUL7Q14999 1698 aa11.73□□□□□ -0.53
THUMPD3-205ENST00000441127 RTN4Q9NQC3 1192 aaKnown RBP11.73□□□□□ -0.53
THUMPD3-205ENST00000441127 IGF1RP08069 1367 aa11.72□□□□□ -0.53
THUMPD3-205ENST00000441127 CHRM1P11229 460 aaPredicted RBP11.72□□□□□ -0.53
THUMPD3-205ENST00000441127 SP7Q8TDD2 431 aaPredicted RBP11.72□□□□□ -0.53
THUMPD3-205ENST00000441127 PYGBP11216 843 aa11.71□□□□□ -0.53
THUMPD3-205ENST00000441127 GRIN2AQ12879 1464 aa11.7□□□□□ -0.54
THUMPD3-205ENST00000441127 EEA1Q15075 1411 aa11.7□□□□□ -0.54
THUMPD3-205ENST00000441127 CARMIL1Q5VZK9 1371 aa11.7□□□□□ -0.54
THUMPD3-205ENST00000441127 FAM9AQ8IZU1 332 aaPredicted RBP11.7□□□□□ -0.54
THUMPD3-205ENST00000441127 RUSC2Q8N2Y8 1516 aa11.7□□□□□ -0.54
THUMPD3-205ENST00000441127 MAP3K13O43283 966 aa11.69□□□□□ -0.54
THUMPD3-205ENST00000441127 GABBR2O75899 941 aa11.68□□□□□ -0.54
THUMPD3-205ENST00000441127 RNF25Q96BH1 459 aaPredicted RBP11.68□□□□□ -0.54
THUMPD3-205ENST00000441127 MS4A3Q96HJ5 214 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms