RNA–Protein interactions for RNA: ENST00000441127.5

THUMPD3-205, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-205ENST00000441127 AEBP2Q6ZN18 517 aaPredicted RBP23.35■■□□□ 1.33
THUMPD3-205ENST00000441127 CHIC1Q5VXU3 224 aa22.66■■□□□ 1.22
THUMPD3-205ENST00000441127 PHF23Q9BUL5 403 aaPredicted RBP20.01■□□□□ 0.79
THUMPD3-205ENST00000441127 SENP3Q9H4L4 574 aaPredicted RBP19.65■□□□□ 0.74
THUMPD3-205ENST00000441127 FOXD1Q16676 465 aa18.34■□□□□ 0.53
THUMPD3-205ENST00000441127 PLPPR3Q6T4P5 718 aa18.29■□□□□ 0.52
THUMPD3-205ENST00000441127 PPP6R1Q9UPN7 881 aa17.66■□□□□ 0.42
THUMPD3-205ENST00000441127 ADRA2BP18089 450 aa17.57■□□□□ 0.4
THUMPD3-205ENST00000441127 PIAS4Q8N2W9 510 aaPredicted RBP17.19■□□□□ 0.34
THUMPD3-205ENST00000441127 MSH5O43196 834 aa16.8■□□□□ 0.28
THUMPD3-205ENST00000441127 NISCHQ9Y2I1 1504 aa16.71■□□□□ 0.27
THUMPD3-205ENST00000441127 POTEDQ86YR6 584 aa16.32■□□□□ 0.2
THUMPD3-205ENST00000441127 PPP4R3CPQ6ZMV5 832 aa16.15■□□□□ 0.18
THUMPD3-205ENST00000441127 MAPK8IP2Q13387 824 aaPredicted RBP15.99■□□□□ 0.15
THUMPD3-205ENST00000441127 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
THUMPD3-205ENST00000441127 KCNA4P22459 653 aa15.78■□□□□ 0.12
THUMPD3-205ENST00000441127 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
THUMPD3-205ENST00000441127 CNKSR2Q8WXI2 1034 aa15.68■□□□□ 0.1
THUMPD3-205ENST00000441127 NCBP3Q53F19 620 aaKnown RBP15.59■□□□□ 0.09
THUMPD3-205ENST00000441127 NPM3O75607 178 aaKnown RBP15.53■□□□□ 0.08
THUMPD3-205ENST00000441127 HOXD11P31277 338 aaPredicted RBP15.42■□□□□ 0.06
THUMPD3-205ENST00000441127 RNF216Q9NWF9 866 aaPredicted RBP15.41■□□□□ 0.06
THUMPD3-205ENST00000441127 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
THUMPD3-205ENST00000441127 SLC4A1APQ9BWU0 796 aaKnown RBP14.93□□□□□ -0.02
THUMPD3-205ENST00000441127 DCAF8L1A6NGE4 600 aa14.89□□□□□ -0.03
THUMPD3-205ENST00000441127 CCDC180Q9P1Z9 1646 aa14.81□□□□□ -0.04
THUMPD3-205ENST00000441127 SLC4A2P04920 1241 aa14.74□□□□□ -0.05
THUMPD3-205ENST00000441127 ZBTB22O15209 634 aa14.61□□□□□ -0.07
THUMPD3-205ENST00000441127 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.54□□□□□ -0.08
THUMPD3-205ENST00000441127 RNF39Q9H2S5 420 aa14.5□□□□□ -0.09
THUMPD3-205ENST00000441127 FOXD4L1Q9NU39 408 aa14.47□□□□□ -0.09
THUMPD3-205ENST00000441127 U3KPZ7 1027 aaPredicted RBP14.46□□□□□ -0.09
THUMPD3-205ENST00000441127 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
THUMPD3-205ENST00000441127 CSRNP3Q8WYN3 585 aa14.41□□□□□ -0.1
THUMPD3-205ENST00000441127 ABCC9O60706 1549 aa14.41□□□□□ -0.1
THUMPD3-205ENST00000441127 MYCNP04198 464 aaPredicted RBP14.27□□□□□ -0.13
THUMPD3-205ENST00000441127 C1QBPQ07021 282 aaKnown RBP14.23□□□□□ -0.13
THUMPD3-205ENST00000441127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.06□□□□□ -0.16
THUMPD3-205ENST00000441127 HNRNPUL2Q1KMD3 747 aaKnown RBP14.06□□□□□ -0.16
THUMPD3-205ENST00000441127 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
THUMPD3-205ENST00000441127 SPINK5Q9NQ38 1064 aaPredicted RBP14.05□□□□□ -0.16
THUMPD3-205ENST00000441127 DCAF8L2P0C7V8 631 aa14.03□□□□□ -0.16
THUMPD3-205ENST00000441127 ATF5Q9Y2D1 282 aaPredicted RBP14.03□□□□□ -0.16
THUMPD3-205ENST00000441127 CACNB1Q02641 598 aaPredicted RBP14.02□□□□□ -0.17
THUMPD3-205ENST00000441127 ZCCHC6Q5VYS8 1495 aaKnown RBP13.95□□□□□ -0.18
THUMPD3-205ENST00000441127 ATXN8OSP0DMR3 200 aa13.95□□□□□ -0.18
THUMPD3-205ENST00000441127 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
THUMPD3-205ENST00000441127 NACADO15069 1562 aa13.91□□□□□ -0.18
THUMPD3-205ENST00000441127 APLP2Q06481 763 aa13.88□□□□□ -0.19
THUMPD3-205ENST00000441127 CAPN15O75808 1086 aa13.87□□□□□ -0.19
THUMPD3-205ENST00000441127 MYO15BQ96JP2 1530 aa13.81□□□□□ -0.2
THUMPD3-205ENST00000441127 DCAF1Q9Y4B6 1507 aa13.81□□□□□ -0.2
THUMPD3-205ENST00000441127 TRHP20396 242 aaPredicted RBP13.8□□□□□ -0.2
THUMPD3-205ENST00000441127 ZNF219Q9P2Y4 722 aaPredicted RBP13.79□□□□□ -0.2
THUMPD3-205ENST00000441127 DSG3P32926 999 aa13.77□□□□□ -0.21
THUMPD3-205ENST00000441127 ABCB7O75027 752 aa13.67□□□□□ -0.22
THUMPD3-205ENST00000441127 POLA2Q14181 598 aa13.61□□□□□ -0.23
THUMPD3-205ENST00000441127 SCRIBQ14160 1630 aa13.57□□□□□ -0.24
THUMPD3-205ENST00000441127 UNC13AQ9UPW8 1703 aa13.54□□□□□ -0.24
THUMPD3-205ENST00000441127 PABPN1Q86U42 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
THUMPD3-205ENST00000441127 MKRN4PQ13434 485 aaPredicted RBP13.43□□□□□ -0.26
THUMPD3-205ENST00000441127 BICRAQ9NZM4 1560 aa13.4□□□□□ -0.26
THUMPD3-205ENST00000441127 SHROOM4Q9ULL8 1493 aa13.37□□□□□ -0.27
THUMPD3-205ENST00000441127 ZBTB12Q9Y330 459 aaPredicted RBP13.3□□□□□ -0.28
THUMPD3-205ENST00000441127 FBLN2P98095 1184 aa13.22□□□□□ -0.29
THUMPD3-205ENST00000441127 OSCARQ8IYS5 282 aa13.2□□□□□ -0.3
THUMPD3-205ENST00000441127 EIF4G1Q04637 1599 aaKnown RBP13.09□□□□□ -0.31
THUMPD3-205ENST00000441127 CC2D2AQ9P2K1 1620 aa13.01□□□□□ -0.33
THUMPD3-205ENST00000441127 SPDYE2BA6NHP3 402 aa13□□□□□ -0.33
THUMPD3-205ENST00000441127 SPDYE6P0CI01 402 aa13□□□□□ -0.33
THUMPD3-205ENST00000441127 SPDYE2Q495Y8 402 aa13□□□□□ -0.33
THUMPD3-205ENST00000441127 CECR2Q9BXF3 1484 aa12.99□□□□□ -0.33
THUMPD3-205ENST00000441127 SSUH2Q9Y2M2 353 aa12.99□□□□□ -0.33
THUMPD3-205ENST00000441127 RBM42Q9BTD8 480 aaKnown RBP12.98□□□□□ -0.33
THUMPD3-205ENST00000441127 BAZ1AQ9NRL2 1556 aaPredicted RBP12.98□□□□□ -0.33
THUMPD3-205ENST00000441127 SPDYE4A6NLX3 237 aa12.96□□□□□ -0.33
THUMPD3-205ENST00000441127 SMARCA4P51532 1647 aa12.95□□□□□ -0.34
THUMPD3-205ENST00000441127 FKBP8Q14318 412 aa12.93□□□□□ -0.34
THUMPD3-205ENST00000441127 ZNF692Q9BU19 519 aaPredicted RBP12.91□□□□□ -0.34
THUMPD3-205ENST00000441127 PROM2Q8N271 834 aa12.89□□□□□ -0.35
THUMPD3-205ENST00000441127 SMARCA2P51531 1590 aa12.87□□□□□ -0.35
THUMPD3-205ENST00000441127 MROH2BQ7Z745 1585 aa12.87□□□□□ -0.35
THUMPD3-205ENST00000441127 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
THUMPD3-205ENST00000441127 ATAD2BQ9ULI0 1458 aa12.84□□□□□ -0.35
THUMPD3-205ENST00000441127 BAZ1BQ9UIG0 1483 aaKnown RBP12.8□□□□□ -0.36
THUMPD3-205ENST00000441127 NCAPD3P42695 1498 aa12.79□□□□□ -0.36
THUMPD3-205ENST00000441127 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
THUMPD3-205ENST00000441127 PEG3Q9GZU2 1588 aa12.78□□□□□ -0.36
THUMPD3-205ENST00000441127 RSF1Q96T23 1441 aaPredicted RBP12.78□□□□□ -0.36
THUMPD3-205ENST00000441127 HMGXB3Q12766 1538 aa12.78□□□□□ -0.36
THUMPD3-205ENST00000441127 WIZO95785 1651 aa12.76□□□□□ -0.37
THUMPD3-205ENST00000441127 POTEHQ6S545 545 aa12.68□□□□□ -0.38
THUMPD3-205ENST00000441127 PITPNM1O00562 1244 aa12.67□□□□□ -0.38
THUMPD3-205ENST00000441127 SUPT5HO00267 1087 aaKnown RBP12.66□□□□□ -0.38
THUMPD3-205ENST00000441127 TOP2AP11388 1531 aaKnown RBP12.65□□□□□ -0.38
THUMPD3-205ENST00000441127 SPDYE1Q8NFV5 336 aaPredicted RBP12.6□□□□□ -0.39
THUMPD3-205ENST00000441127 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
THUMPD3-205ENST00000441127 CLEC11AQ9Y240 323 aa12.51□□□□□ -0.41
THUMPD3-205ENST00000441127 NESP48681 1621 aa12.48□□□□□ -0.41
THUMPD3-205ENST00000441127 LAMC3Q9Y6N6 1575 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms