RNA–Protein interactions for RNA: ENST00000440652.5

UBE2D4-203, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 1,299 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-203ENST00000440652 PROM2Q8N271 834 aa13.17□□□□□ -0.3
UBE2D4-203ENST00000440652 LAMC3Q9Y6N6 1575 aa13.15□□□□□ -0.3
UBE2D4-203ENST00000440652 BAZ1AQ9NRL2 1556 aaPredicted RBP13.12□□□□□ -0.31
UBE2D4-203ENST00000440652 CHADLQ6NUI6 762 aa13.11□□□□□ -0.31
UBE2D4-203ENST00000440652 STAG3Q9UJ98 1225 aa13.11□□□□□ -0.31
UBE2D4-203ENST00000440652 PEG3Q9GZU2 1588 aa13.08□□□□□ -0.32
UBE2D4-203ENST00000440652 HAX1O00165 279 aa13.08□□□□□ -0.32
UBE2D4-203ENST00000440652 MROH2BQ7Z745 1585 aa13.05□□□□□ -0.32
UBE2D4-203ENST00000440652 PDS5BQ9NTI5 1447 aa13.04□□□□□ -0.32
UBE2D4-203ENST00000440652 EVX2Q03828 476 aa13.03□□□□□ -0.32
UBE2D4-203ENST00000440652 SP7Q8TDD2 431 aaPredicted RBP13.03□□□□□ -0.32
UBE2D4-203ENST00000440652 MRC2Q9UBG0 1479 aa13.02□□□□□ -0.33
UBE2D4-203ENST00000440652 C19orf67A6NJJ6 358 aa13.01□□□□□ -0.33
UBE2D4-203ENST00000440652 CREBZFQ9NS37 354 aa13.01□□□□□ -0.33
UBE2D4-203ENST00000440652 WDR62O43379 1518 aa13□□□□□ -0.33
UBE2D4-203ENST00000440652 FARP1Q9Y4F1 1045 aaPredicted RBP12.98□□□□□ -0.33
UBE2D4-203ENST00000440652 CADPSQ9ULU8 1353 aa12.94□□□□□ -0.34
UBE2D4-203ENST00000440652 FKBP8Q14318 412 aa12.94□□□□□ -0.34
UBE2D4-203ENST00000440652 CEP164Q9UPV0 1460 aa12.91□□□□□ -0.34
UBE2D4-203ENST00000440652 WIZO95785 1651 aa12.9□□□□□ -0.34
UBE2D4-203ENST00000440652 FANCD2Q9BXW9 1451 aa12.86□□□□□ -0.35
UBE2D4-203ENST00000440652 MNX1P50219 401 aaPredicted RBP12.84□□□□□ -0.35
UBE2D4-203ENST00000440652 RIMBP3CA6NJZ7 1639 aa12.81□□□□□ -0.36
UBE2D4-203ENST00000440652 RIMBP3BA6NNM3 1639 aa12.81□□□□□ -0.36
UBE2D4-203ENST00000440652 RIMBP3Q9UFD9 1639 aa12.81□□□□□ -0.36
UBE2D4-203ENST00000440652 URB2Q14146 1524 aaKnown RBP12.8□□□□□ -0.36
UBE2D4-203ENST00000440652 CD44P16070 742 aaKnown RBP12.8□□□□□ -0.36
UBE2D4-203ENST00000440652 CFTRP13569 1480 aa12.75□□□□□ -0.37
UBE2D4-203ENST00000440652 ARHGEF11O15085 1522 aa12.72□□□□□ -0.37
UBE2D4-203ENST00000440652 GABBR2O75899 941 aa12.72□□□□□ -0.37
UBE2D4-203ENST00000440652 ZNF608Q9ULD9 1512 aaPredicted RBP12.72□□□□□ -0.37
UBE2D4-203ENST00000440652 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.37
UBE2D4-203ENST00000440652 TOP2AP11388 1531 aaKnown RBP12.68□□□□□ -0.38
UBE2D4-203ENST00000440652 ZNF579Q8NAF0 562 aaKnown RBP12.67□□□□□ -0.38
UBE2D4-203ENST00000440652 MIER1Q8N108 512 aa12.66□□□□□ -0.38
UBE2D4-203ENST00000440652 PRDM2Q13029 1718 aa12.65□□□□□ -0.38
UBE2D4-203ENST00000440652 EIF4G3O43432 1585 aaKnown RBP12.65□□□□□ -0.38
UBE2D4-203ENST00000440652 ZRANB1Q9UGI0 708 aa12.65□□□□□ -0.38
UBE2D4-203ENST00000440652 RSF1Q96T23 1441 aaPredicted RBP12.62□□□□□ -0.39
UBE2D4-203ENST00000440652 IFT140Q96RY7 1462 aa12.62□□□□□ -0.39
UBE2D4-203ENST00000440652 CLCN6P51797 869 aa12.61□□□□□ -0.39
UBE2D4-203ENST00000440652 CHD1O14646 1710 aa12.61□□□□□ -0.39
UBE2D4-203ENST00000440652 CYB5RLQ6IPT4 315 aa12.59□□□□□ -0.39
UBE2D4-203ENST00000440652 ARAP1Q96P48 1450 aa12.59□□□□□ -0.39
UBE2D4-203ENST00000440652 TOPBP1Q92547 1522 aa12.58□□□□□ -0.4
UBE2D4-203ENST00000440652 PLEKHG5O94827 1062 aa12.58□□□□□ -0.4
UBE2D4-203ENST00000440652 PLCD3Q8N3E9 789 aa12.58□□□□□ -0.4
UBE2D4-203ENST00000440652 FBXO3Q9UK99 471 aa12.58□□□□□ -0.4
UBE2D4-203ENST00000440652 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
UBE2D4-203ENST00000440652 PHF12Q96QT6 1004 aa12.54□□□□□ -0.4
UBE2D4-203ENST00000440652 AQRO60306 1485 aaKnown RBP eCLIP12.53□□□□□ -0.4
UBE2D4-203ENST00000440652 CCDC88BA6NC98 1476 aa12.52□□□□□ -0.41
UBE2D4-203ENST00000440652 DNMBPQ6XZF7 1577 aa12.52□□□□□ -0.41
UBE2D4-203ENST00000440652 TARBP1Q13395 1621 aaKnown RBP12.51□□□□□ -0.41
UBE2D4-203ENST00000440652 POTEIP0CG38 1075 aa12.5□□□□□ -0.41
UBE2D4-203ENST00000440652 RASEFQ8IZ41 740 aa12.5□□□□□ -0.41
UBE2D4-203ENST00000440652 GALR2O43603 387 aaPredicted RBP12.48□□□□□ -0.41
UBE2D4-203ENST00000440652 TSPYL2Q9H2G4 693 aaPredicted RBP12.48□□□□□ -0.41
UBE2D4-203ENST00000440652 CCDC61Q9Y6R9 512 aa12.48□□□□□ -0.41
UBE2D4-203ENST00000440652 NUBP1P53384 320 aa12.47□□□□□ -0.41
UBE2D4-203ENST00000440652 ZBTB47Q9UFB7 747 aaPredicted RBP12.47□□□□□ -0.41
UBE2D4-203ENST00000440652 VASPP50552 380 aaPredicted RBP12.46□□□□□ -0.41
UBE2D4-203ENST00000440652 POLA1P09884 1462 aaPredicted RBP12.45□□□□□ -0.42
UBE2D4-203ENST00000440652 RAD54L2Q9Y4B4 1467 aa12.43□□□□□ -0.42
UBE2D4-203ENST00000440652 SNAPC4Q5SXM2 1469 aa12.42□□□□□ -0.42
UBE2D4-203ENST00000440652 ABCC8Q09428 1581 aa12.42□□□□□ -0.42
UBE2D4-203ENST00000440652 CLASP1Q7Z460 1538 aa12.42□□□□□ -0.42
UBE2D4-203ENST00000440652 KIF12Q96FN5 646 aa12.39□□□□□ -0.43
UBE2D4-203ENST00000440652 TDRD9Q8NDG6 1382 aaKnown RBP12.39□□□□□ -0.43
UBE2D4-203ENST00000440652 MS4A3Q96HJ5 214 aa12.38□□□□□ -0.43
UBE2D4-203ENST00000440652 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
UBE2D4-203ENST00000440652 SYNJ1O43426 1573 aa12.35□□□□□ -0.43
UBE2D4-203ENST00000440652 FGD5Q6ZNL6 1462 aa12.34□□□□□ -0.43
UBE2D4-203ENST00000440652 SOGA1O94964 1423 aa12.32□□□□□ -0.44
UBE2D4-203ENST00000440652 MAP3K13O43283 966 aa12.31□□□□□ -0.44
UBE2D4-203ENST00000440652 MAGI1Q96QZ7 1491 aaPredicted RBP12.3□□□□□ -0.44
UBE2D4-203ENST00000440652 FAM212AQ96EL1 285 aa12.3□□□□□ -0.44
UBE2D4-203ENST00000440652 CHMP7Q8WUX9 453 aaPredicted RBP12.29□□□□□ -0.44
UBE2D4-203ENST00000440652 WDR97A6NE52 1622 aa12.29□□□□□ -0.44
UBE2D4-203ENST00000440652 PBRM1Q86U86 1689 aa12.29□□□□□ -0.44
UBE2D4-203ENST00000440652 GAPVD1Q14C86 1478 aa12.28□□□□□ -0.44
UBE2D4-203ENST00000440652 CUX1P39880 1505 aa12.28□□□□□ -0.44
UBE2D4-203ENST00000440652 IFNLR1Q8IU57 520 aaPredicted RBP12.28□□□□□ -0.44
UBE2D4-203ENST00000440652 SYNJ2O15056 1496 aa12.27□□□□□ -0.44
UBE2D4-203ENST00000440652 GRIN2BQ13224 1484 aa12.27□□□□□ -0.45
UBE2D4-203ENST00000440652 ERCC6L2Q5T890 1561 aa12.26□□□□□ -0.45
UBE2D4-203ENST00000440652 ASTLQ6HA08 431 aaPredicted RBP12.26□□□□□ -0.45
UBE2D4-203ENST00000440652 KLHL34Q8N239 644 aa12.26□□□□□ -0.45
UBE2D4-203ENST00000440652 ATMINO43313 823 aaPredicted RBP12.24□□□□□ -0.45
UBE2D4-203ENST00000440652 PELP1Q8IZL8 1130 aaKnown RBP12.24□□□□□ -0.45
UBE2D4-203ENST00000440652 SGIP1Q9BQI5 828 aa12.24□□□□□ -0.45
UBE2D4-203ENST00000440652 TRPC6Q9Y210 931 aa12.23□□□□□ -0.45
UBE2D4-203ENST00000440652 DCAF8Q5TAQ9 597 aa12.22□□□□□ -0.45
UBE2D4-203ENST00000440652 LHX8Q68G74 356 aa12.22□□□□□ -0.45
UBE2D4-203ENST00000440652 ABCA5Q8WWZ7 1642 aa12.19□□□□□ -0.46
UBE2D4-203ENST00000440652 BMP2KQ9NSY1 1161 aaPredicted RBP12.19□□□□□ -0.46
UBE2D4-203ENST00000440652 PCDHB13Q9Y5F0 798 aa12.18□□□□□ -0.46
UBE2D4-203ENST00000440652 SPOCK2Q92563 424 aa12.17□□□□□ -0.46
UBE2D4-203ENST00000440652 TIE1P35590 1138 aa12.16□□□□□ -0.46
UBE2D4-203ENST00000440652 ATN1P54259 1190 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms