RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 CLIP1P30622 1438 aa9.73□□□□□ -0.85
PUM1-207ENST00000440538 PRXQ9BXM0 1461 aa9.71□□□□□ -0.85
PUM1-207ENST00000440538 CYB5RLQ6IPT4 315 aa9.71□□□□□ -0.86
PUM1-207ENST00000440538 SCAF1Q9H7N4 1312 aaKnown RBP9.7□□□□□ -0.86
PUM1-207ENST00000440538 TNIKQ9UKE5 1360 aa9.69□□□□□ -0.86
PUM1-207ENST00000440538 FHOD3Q2V2M9 1422 aa9.69□□□□□ -0.86
PUM1-207ENST00000440538 ABCA5Q8WWZ7 1642 aa9.68□□□□□ -0.86
PUM1-207ENST00000440538 SYNJ2O15056 1496 aa9.67□□□□□ -0.86
PUM1-207ENST00000440538 GRIN2AQ12879 1464 aa9.67□□□□□ -0.86
PUM1-207ENST00000440538 ITGAEP38570 1179 aa9.66□□□□□ -0.86
PUM1-207ENST00000440538 ERICH3Q5RHP9 1530 aa9.66□□□□□ -0.86
PUM1-207ENST00000440538 PBRM1Q86U86 1689 aa9.65□□□□□ -0.86
PUM1-207ENST00000440538 MAGI1Q96QZ7 1491 aaPredicted RBP9.65□□□□□ -0.86
PUM1-207ENST00000440538 KCNH8Q96L42 1107 aa9.65□□□□□ -0.86
PUM1-207ENST00000440538 WDR97A6NE52 1622 aa9.63□□□□□ -0.87
PUM1-207ENST00000440538 ADAMTS12P58397 1594 aa9.63□□□□□ -0.87
PUM1-207ENST00000440538 PRG4Q92954 1404 aaPredicted RBP9.63□□□□□ -0.87
PUM1-207ENST00000440538 TRIM26Q12899 539 aaPredicted RBP9.63□□□□□ -0.87
PUM1-207ENST00000440538 KIF21BO75037 1637 aa9.6□□□□□ -0.87
PUM1-207ENST00000440538 KANK4Q5T7N3 995 aaPredicted RBP9.59□□□□□ -0.87
PUM1-207ENST00000440538 CUL7Q14999 1698 aa9.59□□□□□ -0.87
PUM1-207ENST00000440538 ARAP1Q96P48 1450 aa9.58□□□□□ -0.88
PUM1-207ENST00000440538 PELP1Q8IZL8 1130 aaKnown RBP9.58□□□□□ -0.88
PUM1-207ENST00000440538 CHD1O14646 1710 aa9.58□□□□□ -0.88
PUM1-207ENST00000440538 CEP170Q5SW79 1584 aa9.58□□□□□ -0.88
PUM1-207ENST00000440538 ARHGAP35Q9NRY4 1499 aa9.58□□□□□ -0.88
PUM1-207ENST00000440538 ZNF777Q9ULD5 760 aaPredicted RBP9.57□□□□□ -0.88
PUM1-207ENST00000440538 KIAA0586Q9BVV6 1533 aa9.57□□□□□ -0.88
PUM1-207ENST00000440538 PTPRGP23470 1445 aa9.57□□□□□ -0.88
PUM1-207ENST00000440538 CARMIL2Q6F5E8 1435 aa9.56□□□□□ -0.88
PUM1-207ENST00000440538 NPM1P06748 294 aaKnown RBP eCLIP9.56□□□□□ -0.88
PUM1-207ENST00000440538 IQGAP2Q13576 1575 aa9.55□□□□□ -0.88
PUM1-207ENST00000440538 ERCC6L2Q5T890 1561 aa9.55□□□□□ -0.88
PUM1-207ENST00000440538 FAM50AQ14320 339 aaKnown RBP9.54□□□□□ -0.88
PUM1-207ENST00000440538 TRHP20396 242 aaPredicted RBP9.53□□□□□ -0.88
PUM1-207ENST00000440538 NUP160Q12769 1436 aa9.53□□□□□ -0.88
PUM1-207ENST00000440538 PLB1Q6P1J6 1458 aa9.53□□□□□ -0.88
PUM1-207ENST00000440538 MYT1LQ9UL68 1186 aa9.52□□□□□ -0.89
PUM1-207ENST00000440538 MTUS2Q5JR59 1369 aa9.51□□□□□ -0.89
PUM1-207ENST00000440538 VPS8Q8N3P4 1428 aa9.5□□□□□ -0.89
PUM1-207ENST00000440538 PLEKHD1A6NEE1 506 aa9.5□□□□□ -0.89
PUM1-207ENST00000440538 DISP1Q96F81 1524 aa9.48□□□□□ -0.89
PUM1-207ENST00000440538 CDK11AQ9UQ88 783 aaPredicted RBP9.47□□□□□ -0.89
PUM1-207ENST00000440538 FMN1Q68DA7 1419 aa9.46□□□□□ -0.89
PUM1-207ENST00000440538 CHIC2Q9UKJ5 165 aa9.46□□□□□ -0.89
PUM1-207ENST00000440538 CTTNBP2Q8WZ74 1663 aa9.46□□□□□ -0.89
PUM1-207ENST00000440538 CDK13Q14004 1512 aaKnown RBP9.46□□□□□ -0.9
PUM1-207ENST00000440538 NEUROD1Q13562 356 aa9.45□□□□□ -0.9
PUM1-207ENST00000440538 ZEB1P37275 1124 aaPredicted RBP9.43□□□□□ -0.9
PUM1-207ENST00000440538 KIAA0556O60303 1618 aa9.42□□□□□ -0.9
PUM1-207ENST00000440538 ARHGEF11O15085 1522 aa9.42□□□□□ -0.9
PUM1-207ENST00000440538 PCF11O94913 1555 aaKnown RBP9.41□□□□□ -0.9
PUM1-207ENST00000440538 DNAJC5Q9H3Z4 198 aa9.41□□□□□ -0.9
PUM1-207ENST00000440538 ZNF644Q9H582 1327 aaPredicted RBP9.41□□□□□ -0.9
PUM1-207ENST00000440538 UACAQ9BZF9 1416 aa9.41□□□□□ -0.9
PUM1-207ENST00000440538 UGGT2Q9NYU1 1516 aa9.41□□□□□ -0.9
PUM1-207ENST00000440538 FAM69CQ0P6D2 419 aa9.41□□□□□ -0.9
PUM1-207ENST00000440538 CFDP1Q9UEE9 299 aaPredicted RBP9.39□□□□□ -0.91
PUM1-207ENST00000440538 GTF3C3Q9Y5Q9 886 aa9.39□□□□□ -0.91
PUM1-207ENST00000440538 ACIN1Q9UKV3 1341 aaKnown RBP9.39□□□□□ -0.91
PUM1-207ENST00000440538 EFCAB5A4FU69 1503 aa9.39□□□□□ -0.91
PUM1-207ENST00000440538 CLASP1Q7Z460 1538 aa9.38□□□□□ -0.91
PUM1-207ENST00000440538 CASKIN1Q8WXD9 1431 aa9.38□□□□□ -0.91
PUM1-207ENST00000440538 PLPPR3Q6T4P5 718 aa9.37□□□□□ -0.91
PUM1-207ENST00000440538 NUP153P49790 1475 aaKnown RBP9.37□□□□□ -0.91
PUM1-207ENST00000440538 HNRNPMP52272 730 aaKnown RBP eCLIP9.37□□□□□ -0.912e-7■■■■□ 20.6
PUM1-207ENST00000440538 RRP7BPQ9NSQ0 103 aa9.36□□□□□ -0.91
PUM1-207ENST00000440538 EPRSP07814 1512 aaKnown RBP9.36□□□□□ -0.91
PUM1-207ENST00000440538 ATP10BO94823 1461 aa9.36□□□□□ -0.91
PUM1-207ENST00000440538 CCNB3Q8WWL7 1395 aa9.35□□□□□ -0.91
PUM1-207ENST00000440538 SAMD9Q5K651 1589 aa9.35□□□□□ -0.91
PUM1-207ENST00000440538 PHLDB1Q86UU1 1377 aa9.34□□□□□ -0.91
PUM1-207ENST00000440538 RIMBP3CA6NJZ7 1639 aa9.33□□□□□ -0.92
PUM1-207ENST00000440538 RIMBP3BA6NNM3 1639 aa9.33□□□□□ -0.92
PUM1-207ENST00000440538 RIMBP3Q9UFD9 1639 aa9.33□□□□□ -0.92
PUM1-207ENST00000440538 FYCO1Q9BQS8 1478 aa9.33□□□□□ -0.92
PUM1-207ENST00000440538 RAPGEF6Q8TEU7 1601 aa9.32□□□□□ -0.92
PUM1-207ENST00000440538 LRRC9Q6ZRR7 1453 aa9.32□□□□□ -0.92
PUM1-207ENST00000440538 ASXL2Q76L83 1435 aa9.3□□□□□ -0.92
PUM1-207ENST00000440538 CCER1Q8TC90 406 aaPredicted RBP9.3□□□□□ -0.92
PUM1-207ENST00000440538 RAPGEF3O95398 923 aa9.3□□□□□ -0.92
PUM1-207ENST00000440538 AFAP1Q8N556 730 aa9.3□□□□□ -0.92
PUM1-207ENST00000440538 TRIM52Q96A61 297 aa9.3□□□□□ -0.92
PUM1-207ENST00000440538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.3□□□□□ -0.922e-6■□□□□ 10.4
PUM1-207ENST00000440538 TIAM1Q13009 1591 aa9.29□□□□□ -0.92
PUM1-207ENST00000440538 HECW1Q76N89 1606 aa9.29□□□□□ -0.92
PUM1-207ENST00000440538 NCOA2Q15596 1464 aa9.29□□□□□ -0.92
PUM1-207ENST00000440538 MAGI3Q5TCQ9 1506 aa9.29□□□□□ -0.92
PUM1-207ENST00000440538 YTHDC1Q96MU7 727 aaKnown RBP9.28□□□□□ -0.92
PUM1-207ENST00000440538 CCDC18Q5T9S5 1454 aa9.28□□□□□ -0.92
PUM1-207ENST00000440538 ABCC2Q92887 1545 aa9.27□□□□□ -0.92
PUM1-207ENST00000440538 TROQ12816 1431 aaPredicted RBP9.27□□□□□ -0.93
PUM1-207ENST00000440538 MLECQ14165 292 aa9.27□□□□□ -0.93
PUM1-207ENST00000440538 DIEXFQ68CQ4 756 aaKnown RBP9.27□□□□□ -0.93
PUM1-207ENST00000440538 SHROOM2Q13796 1616 aa9.27□□□□□ -0.93
PUM1-207ENST00000440538 TSPY4P0CV99 314 aa9.27□□□□□ -0.93
PUM1-207ENST00000440538 TSPY10P0CW01 314 aa9.27□□□□□ -0.93
PUM1-207ENST00000440538 EFCAB2Q5VUJ9 269 aa9.26□□□□□ -0.93
PUM1-207ENST00000440538 ABCA8O94911 1581 aa9.26□□□□□ -0.93
PUM1-207ENST00000440538 SENP3Q9H4L4 574 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms