RNA–Protein interactions for RNA: ENST00000439600.2

LMO3-207, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,044 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-207ENST00000439600 WRNQ14191 1432 aaPredicted RBP eCLIP18.26■□□□□ 0.51
LMO3-207ENST00000439600 MRC2Q9UBG0 1479 aa18.26■□□□□ 0.51
LMO3-207ENST00000439600 KIF21AQ7Z4S6 1674 aa18.19■□□□□ 0.5
LMO3-207ENST00000439600 VASPP50552 380 aaPredicted RBP18.19■□□□□ 0.5
LMO3-207ENST00000439600 SPDYE2BA6NHP3 402 aa18.17■□□□□ 0.5
LMO3-207ENST00000439600 SPDYE6P0CI01 402 aa18.17■□□□□ 0.5
LMO3-207ENST00000439600 SPDYE2Q495Y8 402 aa18.17■□□□□ 0.5
LMO3-207ENST00000439600 CACNB1Q02641 598 aaPredicted RBP18.16■□□□□ 0.5
LMO3-207ENST00000439600 URB2Q14146 1524 aaKnown RBP18.16■□□□□ 0.5
LMO3-207ENST00000439600 TOPBP1Q92547 1522 aa18.15■□□□□ 0.5
LMO3-207ENST00000439600 DNMBPQ6XZF7 1577 aa18.15■□□□□ 0.5
LMO3-207ENST00000439600 WDR62O43379 1518 aa18.13■□□□□ 0.49
LMO3-207ENST00000439600 ZNF692Q9BU19 519 aaPredicted RBP18.13■□□□□ 0.49
LMO3-207ENST00000439600 CUX1P39880 1505 aa18.12■□□□□ 0.49
LMO3-207ENST00000439600 OSCARQ8IYS5 282 aa18.09■□□□□ 0.49
LMO3-207ENST00000439600 TOP2BQ02880 1626 aa18.09■□□□□ 0.49
LMO3-207ENST00000439600 THOC2Q8NI27 1593 aaKnown RBP18.08■□□□□ 0.49
LMO3-207ENST00000439600 SSUH2Q9Y2M2 353 aa18.07■□□□□ 0.48
LMO3-207ENST00000439600 SOGA1O94964 1423 aa18.06■□□□□ 0.48
LMO3-207ENST00000439600 SYNJ1O43426 1573 aa18.04■□□□□ 0.48
LMO3-207ENST00000439600 FGD5Q6ZNL6 1462 aa18.03■□□□□ 0.48
LMO3-207ENST00000439600 POLA1P09884 1462 aaPredicted RBP18.02■□□□□ 0.48
LMO3-207ENST00000439600 BIVM-ERCC5R4GMW8 1640 aa18.02■□□□□ 0.48
LMO3-207ENST00000439600 IFT140Q96RY7 1462 aa18.01■□□□□ 0.47
LMO3-207ENST00000439600 STAG3Q9UJ98 1225 aa17.97■□□□□ 0.47
LMO3-207ENST00000439600 SLC24A1O60721 1099 aa17.95■□□□□ 0.46
LMO3-207ENST00000439600 IFNLR1Q8IU57 520 aaPredicted RBP17.94■□□□□ 0.46
LMO3-207ENST00000439600 RAD54L2Q9Y4B4 1467 aa17.94■□□□□ 0.46
LMO3-207ENST00000439600 ABCA10Q8WWZ4 1543 aa17.92■□□□□ 0.46
LMO3-207ENST00000439600 KIF27Q86VH2 1401 aa17.89■□□□□ 0.46
LMO3-207ENST00000439600 TDRD9Q8NDG6 1382 aaKnown RBP17.88■□□□□ 0.45
LMO3-207ENST00000439600 TARBP1Q13395 1621 aaKnown RBP17.85■□□□□ 0.45
LMO3-207ENST00000439600 EEA1Q15075 1411 aa17.85■□□□□ 0.45
LMO3-207ENST00000439600 WDR97A6NE52 1622 aa17.83■□□□□ 0.44
LMO3-207ENST00000439600 GAPVD1Q14C86 1478 aa17.82■□□□□ 0.44
LMO3-207ENST00000439600 AQRO60306 1485 aaKnown RBP eCLIP17.81■□□□□ 0.44
LMO3-207ENST00000439600 ZNF608Q9ULD9 1512 aaPredicted RBP17.79■□□□□ 0.44
LMO3-207ENST00000439600 GRIN2BQ13224 1484 aa17.77■□□□□ 0.44
LMO3-207ENST00000439600 IGF1RP08069 1367 aa17.77■□□□□ 0.43
LMO3-207ENST00000439600 FAM9AQ8IZU1 332 aaPredicted RBP17.75■□□□□ 0.43
LMO3-207ENST00000439600 KLHL34Q8N239 644 aa17.72■□□□□ 0.43
LMO3-207ENST00000439600 SPOCK2Q92563 424 aa17.71■□□□□ 0.43
LMO3-207ENST00000439600 ERICH3Q5RHP9 1530 aa17.71■□□□□ 0.43
LMO3-207ENST00000439600 PLCD3Q8N3E9 789 aa17.7■□□□□ 0.42
LMO3-207ENST00000439600 RUSC2Q8N2Y8 1516 aa17.7■□□□□ 0.42
LMO3-207ENST00000439600 ABCA5Q8WWZ7 1642 aa17.69■□□□□ 0.42
LMO3-207ENST00000439600 CARMIL1Q5VZK9 1371 aa17.68■□□□□ 0.42
LMO3-207ENST00000439600 EIF4G3O43432 1585 aaKnown RBP17.68■□□□□ 0.42
LMO3-207ENST00000439600 CHMP7Q8WUX9 453 aaPredicted RBP17.68■□□□□ 0.42
LMO3-207ENST00000439600 MAGI1Q96QZ7 1491 aaPredicted RBP17.67■□□□□ 0.42
LMO3-207ENST00000439600 FHAD1B1AJZ9 1412 aa17.65■□□□□ 0.42
LMO3-207ENST00000439600 RBM42Q9BTD8 480 aaKnown RBP17.65■□□□□ 0.42
LMO3-207ENST00000439600 MIER1Q8N108 512 aa17.63■□□□□ 0.41
LMO3-207ENST00000439600 SNAPC4Q5SXM2 1469 aa17.62■□□□□ 0.41
LMO3-207ENST00000439600 PLEKHG5O94827 1062 aa17.61■□□□□ 0.41
LMO3-207ENST00000439600 PKD2Q13563 968 aa17.6■□□□□ 0.41
LMO3-207ENST00000439600 SYNJ2O15056 1496 aa17.59■□□□□ 0.41
LMO3-207ENST00000439600 RAPGEF2Q9Y4G8 1499 aa17.59■□□□□ 0.41
LMO3-207ENST00000439600 PRXQ9BXM0 1461 aa17.58■□□□□ 0.41
LMO3-207ENST00000439600 ZBTB47Q9UFB7 747 aaPredicted RBP17.58■□□□□ 0.4
LMO3-207ENST00000439600 CUL7Q14999 1698 aa17.56■□□□□ 0.4
LMO3-207ENST00000439600 RIMBP3CA6NJZ7 1639 aa17.55■□□□□ 0.4
LMO3-207ENST00000439600 RIMBP3BA6NNM3 1639 aa17.55■□□□□ 0.4
LMO3-207ENST00000439600 RIMBP3Q9UFD9 1639 aa17.55■□□□□ 0.4
LMO3-207ENST00000439600 PBRM1Q86U86 1689 aa17.55■□□□□ 0.4
LMO3-207ENST00000439600 AKT1S1Q96B36 256 aa17.54■□□□□ 0.4
LMO3-207ENST00000439600 UBTFP17480 764 aaKnown RBP17.52■□□□□ 0.4
LMO3-207ENST00000439600 ADAMTS12P58397 1594 aa17.5■□□□□ 0.39
LMO3-207ENST00000439600 GRIN2AQ12879 1464 aa17.5■□□□□ 0.39
LMO3-207ENST00000439600 GOLGA3Q08378 1498 aa17.49■□□□□ 0.39
LMO3-207ENST00000439600 SPDYE1Q8NFV5 336 aaPredicted RBP17.47■□□□□ 0.39
LMO3-207ENST00000439600 KIF21BO75037 1637 aa17.46■□□□□ 0.39
LMO3-207ENST00000439600 LOC105371045A0A1W2PR82 267 aa17.42■□□□□ 0.38
LMO3-207ENST00000439600 NUP160Q12769 1436 aa17.41■□□□□ 0.38
LMO3-207ENST00000439600 KIAA0586Q9BVV6 1533 aa17.4■□□□□ 0.38
LMO3-207ENST00000439600 TNIKQ9UKE5 1360 aa17.4■□□□□ 0.38
LMO3-207ENST00000439600 ECM2O94769 699 aaPredicted RBP17.39■□□□□ 0.37
LMO3-207ENST00000439600 JPH4Q96JJ6 628 aa17.37■□□□□ 0.37
LMO3-207ENST00000439600 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
LMO3-207ENST00000439600 PLCB2Q00722 1185 aa17.32■□□□□ 0.36
LMO3-207ENST00000439600 CHD1O14646 1710 aa17.3■□□□□ 0.36
LMO3-207ENST00000439600 REM2Q8IYK8 340 aaPredicted RBP17.3■□□□□ 0.36
LMO3-207ENST00000439600 CEP170Q5SW79 1584 aa17.3■□□□□ 0.36
LMO3-207ENST00000439600 CYB5RLQ6IPT4 315 aa17.27■□□□□ 0.36
LMO3-207ENST00000439600 CARMIL2Q6F5E8 1435 aa17.27■□□□□ 0.35
LMO3-207ENST00000439600 RANGAP1P46060 587 aaPredicted RBP17.26■□□□□ 0.35
LMO3-207ENST00000439600 IQGAP2Q13576 1575 aa17.26■□□□□ 0.35
LMO3-207ENST00000439600 PRR29P0C7W0 189 aa17.25■□□□□ 0.35
LMO3-207ENST00000439600 CIZ1Q9ULV3 898 aaPredicted RBP17.24■□□□□ 0.35
LMO3-207ENST00000439600 CLEC11AQ9Y240 323 aa17.24■□□□□ 0.35
LMO3-207ENST00000439600 CLASP1Q7Z460 1538 aa17.24■□□□□ 0.35
LMO3-207ENST00000439600 PRG4Q92954 1404 aaPredicted RBP17.21■□□□□ 0.35
LMO3-207ENST00000439600 UGGT2Q9NYU1 1516 aa17.21■□□□□ 0.35
LMO3-207ENST00000439600 CLIP1P30622 1438 aa17.2■□□□□ 0.34
LMO3-207ENST00000439600 GSE1Q14687 1217 aa17.19■□□□□ 0.34
LMO3-207ENST00000439600 CTTNBP2Q8WZ74 1663 aa17.18■□□□□ 0.34
LMO3-207ENST00000439600 CEP162Q5TB80 1403 aa17.17■□□□□ 0.34
LMO3-207ENST00000439600 RGL2O15211 777 aa17.16■□□□□ 0.34
LMO3-207ENST00000439600 P3H3Q8IVL6 736 aa17.16■□□□□ 0.34
LMO3-207ENST00000439600 BBXQ8WY36 941 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms