RNA–Protein interactions for RNA: ENST00000439260.5

SLC13A1-203, Transcript of solute carrier family 13 member 1, humanhuman

TSL 1 (best)

Gene SLC13A1, Length 2,457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A1-203ENST00000439260 VPS8Q8N3P4 1428 aa11.37□□□□□ -0.59
SLC13A1-203ENST00000439260 DIEXFQ68CQ4 756 aaKnown RBP11.36□□□□□ -0.59
SLC13A1-203ENST00000439260 EIF4G3O43432 1585 aaKnown RBP11.35□□□□□ -0.59
SLC13A1-203ENST00000439260 PRXQ9BXM0 1461 aa11.35□□□□□ -0.59
SLC13A1-203ENST00000439260 ABCA10Q8WWZ4 1543 aa11.35□□□□□ -0.59
SLC13A1-203ENST00000439260 ARAP1Q96P48 1450 aa11.34□□□□□ -0.59
SLC13A1-203ENST00000439260 P3H3Q8IVL6 736 aa11.33□□□□□ -0.6
SLC13A1-203ENST00000439260 FGD5Q6ZNL6 1462 aa11.33□□□□□ -0.6
SLC13A1-203ENST00000439260 ABCA5Q8WWZ7 1642 aa11.33□□□□□ -0.6
SLC13A1-203ENST00000439260 KIF27Q86VH2 1401 aa11.32□□□□□ -0.6
SLC13A1-203ENST00000439260 PBRM1Q86U86 1689 aa11.32□□□□□ -0.6
SLC13A1-203ENST00000439260 CLSPNQ9HAW4 1339 aa11.31□□□□□ -0.6
SLC13A1-203ENST00000439260 ITGAEP38570 1179 aa11.3□□□□□ -0.6
SLC13A1-203ENST00000439260 MAGI1Q96QZ7 1491 aaPredicted RBP11.3□□□□□ -0.6
SLC13A1-203ENST00000439260 RAD54L2Q9Y4B4 1467 aa11.3□□□□□ -0.6
SLC13A1-203ENST00000439260 IGF1RP08069 1367 aa11.28□□□□□ -0.6
SLC13A1-203ENST00000439260 DNAJC5Q9H3Z4 198 aa11.27□□□□□ -0.61
SLC13A1-203ENST00000439260 GRIN2BQ13224 1484 aa11.27□□□□□ -0.61
SLC13A1-203ENST00000439260 ERICH3Q5RHP9 1530 aa11.26□□□□□ -0.61
SLC13A1-203ENST00000439260 ARHGAP35Q9NRY4 1499 aa11.26□□□□□ -0.61
SLC13A1-203ENST00000439260 ATP1B4Q9UN42 357 aaPredicted RBP11.26□□□□□ -0.61
SLC13A1-203ENST00000439260 TSHZ2Q9NRE2 1034 aa11.25□□□□□ -0.61
SLC13A1-203ENST00000439260 CHD1O14646 1710 aa11.24□□□□□ -0.61
SLC13A1-203ENST00000439260 ZNF608Q9ULD9 1512 aaPredicted RBP11.24□□□□□ -0.61
SLC13A1-203ENST00000439260 CARMIL1Q5VZK9 1371 aa11.22□□□□□ -0.61
SLC13A1-203ENST00000439260 GAPVD1Q14C86 1478 aa11.21□□□□□ -0.61
SLC13A1-203ENST00000439260 CUL7Q14999 1698 aa11.21□□□□□ -0.61
SLC13A1-203ENST00000439260 SYNJ2O15056 1496 aa11.19□□□□□ -0.62
SLC13A1-203ENST00000439260 ADAMTS12P58397 1594 aa11.19□□□□□ -0.62
SLC13A1-203ENST00000439260 UBE2Q2Q8WVN8 375 aa11.18□□□□□ -0.62
SLC13A1-203ENST00000439260 CLASP1Q7Z460 1538 aa11.17□□□□□ -0.62
SLC13A1-203ENST00000439260 TDRD9Q8NDG6 1382 aaKnown RBP11.17□□□□□ -0.62
SLC13A1-203ENST00000439260 AQRO60306 1485 aaKnown RBP eCLIP11.15□□□□□ -0.62
SLC13A1-203ENST00000439260 YTHDC1Q96MU7 727 aaKnown RBP11.15□□□□□ -0.62
SLC13A1-203ENST00000439260 SNAPC4Q5SXM2 1469 aa11.15□□□□□ -0.62
SLC13A1-203ENST00000439260 OSCARQ8IYS5 282 aa11.15□□□□□ -0.62
SLC13A1-203ENST00000439260 ANO8Q9HCE9 1232 aaPredicted RBP11.15□□□□□ -0.62
SLC13A1-203ENST00000439260 FHAD1B1AJZ9 1412 aa11.15□□□□□ -0.63
SLC13A1-203ENST00000439260 FHOD3Q2V2M9 1422 aa11.15□□□□□ -0.63
SLC13A1-203ENST00000439260 EIF5BO60841 1220 aaKnown RBP11.14□□□□□ -0.63
SLC13A1-203ENST00000439260 DAXXQ9UER7 740 aaPredicted RBP11.14□□□□□ -0.63
SLC13A1-203ENST00000439260 ZNF316A6NFI3 1004 aaPredicted RBP11.13□□□□□ -0.63
SLC13A1-203ENST00000439260 MYT1LQ9UL68 1186 aa11.12□□□□□ -0.63
SLC13A1-203ENST00000439260 SUPT16HQ9Y5B9 1047 aaKnown RBP11.12□□□□□ -0.63
SLC13A1-203ENST00000439260 SHROOM2Q13796 1616 aa11.11□□□□□ -0.63
SLC13A1-203ENST00000439260 DHX57Q6P158 1386 aaKnown RBP11.11□□□□□ -0.63
SLC13A1-203ENST00000439260 FAM50AQ14320 339 aaKnown RBP11.1□□□□□ -0.63
SLC13A1-203ENST00000439260 NUP160Q12769 1436 aa11.1□□□□□ -0.63
SLC13A1-203ENST00000439260 ARID3CA6NKF2 412 aa11.1□□□□□ -0.63
SLC13A1-203ENST00000439260 PHLDB1Q86UU1 1377 aa11.09□□□□□ -0.63
SLC13A1-203ENST00000439260 MIER1Q8N108 512 aa11.09□□□□□ -0.63
SLC13A1-203ENST00000439260 GRIN2AQ12879 1464 aa11.09□□□□□ -0.63
SLC13A1-203ENST00000439260 CCNB3Q8WWL7 1395 aa11.09□□□□□ -0.63
SLC13A1-203ENST00000439260 PCF11O94913 1555 aaKnown RBP11.08□□□□□ -0.63
SLC13A1-203ENST00000439260 RRBP1Q9P2E9 1410 aaKnown RBP11.07□□□□□ -0.64
SLC13A1-203ENST00000439260 ERICH6BQ5W0A0 696 aa11.07□□□□□ -0.64
SLC13A1-203ENST00000439260 TIAM1Q13009 1591 aa11.06□□□□□ -0.64
SLC13A1-203ENST00000439260 RIMBP3CA6NJZ7 1639 aa11.06□□□□□ -0.64
SLC13A1-203ENST00000439260 RIMBP3BA6NNM3 1639 aa11.06□□□□□ -0.64
SLC13A1-203ENST00000439260 RIMBP3Q9UFD9 1639 aa11.06□□□□□ -0.64
SLC13A1-203ENST00000439260 PHF23Q9BUL5 403 aaPredicted RBP11.05□□□□□ -0.64
SLC13A1-203ENST00000439260 LRRC9Q6ZRR7 1453 aa11.03□□□□□ -0.64
SLC13A1-203ENST00000439260 RAB3GAP2Q9H2M9 1393 aa11.03□□□□□ -0.64
SLC13A1-203ENST00000439260 CEP170Q5SW79 1584 aa11.02□□□□□ -0.64
SLC13A1-203ENST00000439260 SIN3AQ96ST3 1273 aa11.01□□□□□ -0.65
SLC13A1-203ENST00000439260 ARHGEF11O15085 1522 aa11.01□□□□□ -0.65
SLC13A1-203ENST00000439260 CHMP7Q8WUX9 453 aaPredicted RBP11□□□□□ -0.65
SLC13A1-203ENST00000439260 CTTNBP2Q8WZ74 1663 aa10.98□□□□□ -0.65
SLC13A1-203ENST00000439260 KIAA0586Q9BVV6 1533 aa10.98□□□□□ -0.65
SLC13A1-203ENST00000439260 HIRIP3Q9BW71 556 aaPredicted RBP10.98□□□□□ -0.65
SLC13A1-203ENST00000439260 LRRIQ1Q96JM4 1722 aa10.98□□□□□ -0.65
SLC13A1-203ENST00000439260 MAPKBP1O60336 1514 aa10.95□□□□□ -0.66
SLC13A1-203ENST00000439260 CFAP43Q8NDM7 1665 aa10.95□□□□□ -0.66
SLC13A1-203ENST00000439260 SALL2Q9Y467 1007 aaPredicted RBP10.95□□□□□ -0.66
SLC13A1-203ENST00000439260 RBM19Q9Y4C8 960 aaKnown RBP10.93□□□□□ -0.66
SLC13A1-203ENST00000439260 UGGT2Q9NYU1 1516 aa10.92□□□□□ -0.66
SLC13A1-203ENST00000439260 CASKIN1Q8WXD9 1431 aa10.92□□□□□ -0.66
SLC13A1-203ENST00000439260 PTPRKQ15262 1439 aa10.91□□□□□ -0.66
SLC13A1-203ENST00000439260 SETD5Q9C0A6 1442 aa10.91□□□□□ -0.66
SLC13A1-203ENST00000439260 IQGAP2Q13576 1575 aa10.91□□□□□ -0.66
SLC13A1-203ENST00000439260 DEKP35659 375 aaKnown RBP10.91□□□□□ -0.66
SLC13A1-203ENST00000439260 CHIC2Q9UKJ5 165 aa10.91□□□□□ -0.66
SLC13A1-203ENST00000439260 KCNH8Q96L42 1107 aa10.91□□□□□ -0.66
SLC13A1-203ENST00000439260 MTUS2Q5JR59 1369 aa10.91□□□□□ -0.66
SLC13A1-203ENST00000439260 FYCO1Q9BQS8 1478 aa10.91□□□□□ -0.66
SLC13A1-203ENST00000439260 MAGI3Q5TCQ9 1506 aa10.89□□□□□ -0.67
SLC13A1-203ENST00000439260 PKNOX2Q96KN3 472 aa10.89□□□□□ -0.67
SLC13A1-203ENST00000439260 MAP3K1Q13233 1512 aa10.88□□□□□ -0.67
SLC13A1-203ENST00000439260 EFCAB5A4FU69 1503 aa10.88□□□□□ -0.67
SLC13A1-203ENST00000439260 SAMD9Q5K651 1589 aa10.87□□□□□ -0.67
SLC13A1-203ENST00000439260 RRP7BPQ9NSQ0 103 aa10.87□□□□□ -0.67
SLC13A1-203ENST00000439260 FBLN2P98095 1184 aa10.86□□□□□ -0.67
SLC13A1-203ENST00000439260 CDK13Q14004 1512 aaKnown RBP10.86□□□□□ -0.67
SLC13A1-203ENST00000439260 FMN1Q68DA7 1419 aa10.86□□□□□ -0.67
SLC13A1-203ENST00000439260 FGD6Q6ZV73 1430 aa10.86□□□□□ -0.67
SLC13A1-203ENST00000439260 MSH5O43196 834 aa10.85□□□□□ -0.67
SLC13A1-203ENST00000439260 CCDC136Q96JN2 1154 aa10.85□□□□□ -0.67
SLC13A1-203ENST00000439260 NCOA2Q15596 1464 aa10.85□□□□□ -0.67
SLC13A1-203ENST00000439260 CARMIL2Q6F5E8 1435 aa10.85□□□□□ -0.67
SLC13A1-203ENST00000439260 UHRF1BP1LA0JNW5 1464 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms