RNA–Protein interactions for RNA: ENST00000437944.5

SCRN3-206, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,141 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-206ENST00000437944 SYNJ2O15056 1496 aa20.42■□□□□ 0.86
SCRN3-206ENST00000437944 RAPGEF2Q9Y4G8 1499 aa20.42■□□□□ 0.86
SCRN3-206ENST00000437944 GOLGA3Q08378 1498 aa20.36■□□□□ 0.85
SCRN3-206ENST00000437944 CHD1O14646 1710 aa20.36■□□□□ 0.85
SCRN3-206ENST00000437944 GRIN2AQ12879 1464 aa20.35■□□□□ 0.85
SCRN3-206ENST00000437944 CHMP7Q8WUX9 453 aaPredicted RBP20.34■□□□□ 0.85
SCRN3-206ENST00000437944 SCAF1Q9H7N4 1312 aaKnown RBP20.3■□□□□ 0.84
SCRN3-206ENST00000437944 FBLN2P98095 1184 aa20.29■□□□□ 0.84
SCRN3-206ENST00000437944 NCBP3Q53F19 620 aaKnown RBP20.28■□□□□ 0.84
SCRN3-206ENST00000437944 CTTNBP2Q8WZ74 1663 aa20.24■□□□□ 0.83
SCRN3-206ENST00000437944 LOC105371045A0A1W2PR82 267 aa20.24■□□□□ 0.83
SCRN3-206ENST00000437944 NUP160Q12769 1436 aa20.24■□□□□ 0.83
SCRN3-206ENST00000437944 CEP170Q5SW79 1584 aa20.23■□□□□ 0.83
SCRN3-206ENST00000437944 EHMT2Q96KQ7 1210 aa20.22■□□□□ 0.83
SCRN3-206ENST00000437944 UBTFP17480 764 aaKnown RBP20.21■□□□□ 0.83
SCRN3-206ENST00000437944 MAPK8IP2Q13387 824 aaPredicted RBP20.2■□□□□ 0.82
SCRN3-206ENST00000437944 TNIKQ9UKE5 1360 aa20.2■□□□□ 0.82
SCRN3-206ENST00000437944 KIAA0586Q9BVV6 1533 aa20.17■□□□□ 0.82
SCRN3-206ENST00000437944 CNKSR2Q8WXI2 1034 aa20.17■□□□□ 0.82
SCRN3-206ENST00000437944 IQGAP2Q13576 1575 aa20.13■□□□□ 0.81
SCRN3-206ENST00000437944 NPM3O75607 178 aaKnown RBP20.13■□□□□ 0.81
SCRN3-206ENST00000437944 OSCARQ8IYS5 282 aa20.13■□□□□ 0.81
SCRN3-206ENST00000437944 CLASP1Q7Z460 1538 aa20.12■□□□□ 0.81
SCRN3-206ENST00000437944 UGGT2Q9NYU1 1516 aa20.06■□□□□ 0.8
SCRN3-206ENST00000437944 SHROOM2Q13796 1616 aa20.05■□□□□ 0.8
SCRN3-206ENST00000437944 JPH4Q96JJ6 628 aa20.02■□□□□ 0.8
SCRN3-206ENST00000437944 CEP162Q5TB80 1403 aa20.01■□□□□ 0.79
SCRN3-206ENST00000437944 SAMD9Q5K651 1589 aa20■□□□□ 0.79
SCRN3-206ENST00000437944 EFCAB5A4FU69 1503 aa19.99■□□□□ 0.79
SCRN3-206ENST00000437944 CLIP1P30622 1438 aa19.98■□□□□ 0.79
SCRN3-206ENST00000437944 ARHGAP35Q9NRY4 1499 aa19.95■□□□□ 0.78
SCRN3-206ENST00000437944 RANGAP1P46060 587 aaPredicted RBP19.95■□□□□ 0.78
SCRN3-206ENST00000437944 DISP1Q96F81 1524 aa19.95■□□□□ 0.78
SCRN3-206ENST00000437944 KIAA0556O60303 1618 aa19.94■□□□□ 0.78
SCRN3-206ENST00000437944 PRG4Q92954 1404 aaPredicted RBP19.93■□□□□ 0.78
SCRN3-206ENST00000437944 CARMIL2Q6F5E8 1435 aa19.93■□□□□ 0.78
SCRN3-206ENST00000437944 ERCC6L2Q5T890 1561 aa19.87■□□□□ 0.77
SCRN3-206ENST00000437944 ARAP1Q96P48 1450 aa19.86■□□□□ 0.77
SCRN3-206ENST00000437944 P3H3Q8IVL6 736 aa19.85■□□□□ 0.77
SCRN3-206ENST00000437944 DMRT2Q9Y5R5 561 aa19.85■□□□□ 0.77
SCRN3-206ENST00000437944 FHOD3Q2V2M9 1422 aa19.85■□□□□ 0.77
SCRN3-206ENST00000437944 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
SCRN3-206ENST00000437944 FMN1Q68DA7 1419 aa19.78■□□□□ 0.76
SCRN3-206ENST00000437944 RIMBP3CA6NJZ7 1639 aa19.77■□□□□ 0.76
SCRN3-206ENST00000437944 RIMBP3BA6NNM3 1639 aa19.77■□□□□ 0.76
SCRN3-206ENST00000437944 RIMBP3Q9UFD9 1639 aa19.77■□□□□ 0.76
SCRN3-206ENST00000437944 SLC4A1APQ9BWU0 796 aaKnown RBP19.77■□□□□ 0.76
SCRN3-206ENST00000437944 PTPRGP23470 1445 aa19.76■□□□□ 0.75
SCRN3-206ENST00000437944 VPS8Q8N3P4 1428 aa19.76■□□□□ 0.75
SCRN3-206ENST00000437944 RNF216Q9NWF9 866 aaPredicted RBP19.72■□□□□ 0.75
SCRN3-206ENST00000437944 ABCA8O94911 1581 aa19.7■□□□□ 0.74
SCRN3-206ENST00000437944 RAPGEF6Q8TEU7 1601 aa19.69■□□□□ 0.74
SCRN3-206ENST00000437944 TTBK1Q5TCY1 1321 aaPredicted RBP19.69■□□□□ 0.74
SCRN3-206ENST00000437944 PCF11O94913 1555 aaKnown RBP19.69■□□□□ 0.74
SCRN3-206ENST00000437944 CASKIN1Q8WXD9 1431 aa19.68■□□□□ 0.74
SCRN3-206ENST00000437944 PLB1Q6P1J6 1458 aa19.67■□□□□ 0.74
SCRN3-206ENST00000437944 FYCO1Q9BQS8 1478 aa19.67■□□□□ 0.74
SCRN3-206ENST00000437944 UACAQ9BZF9 1416 aa19.66■□□□□ 0.74
SCRN3-206ENST00000437944 UHRF1BP1LA0JNW5 1464 aa19.64■□□□□ 0.73
SCRN3-206ENST00000437944 HECW1Q76N89 1606 aa19.64■□□□□ 0.73
SCRN3-206ENST00000437944 ABCC2Q92887 1545 aa19.63■□□□□ 0.73
SCRN3-206ENST00000437944 HOXD11P31277 338 aaPredicted RBP19.61■□□□□ 0.73
SCRN3-206ENST00000437944 NUP153P49790 1475 aaKnown RBP19.6■□□□□ 0.73
SCRN3-206ENST00000437944 LRRIQ1Q96JM4 1722 aa19.6■□□□□ 0.73
SCRN3-206ENST00000437944 ADCY10Q96PN6 1610 aa19.59■□□□□ 0.73
SCRN3-206ENST00000437944 CCDC18Q5T9S5 1454 aa19.56■□□□□ 0.72
SCRN3-206ENST00000437944 CYB5RLQ6IPT4 315 aa19.56■□□□□ 0.72
SCRN3-206ENST00000437944 ATP1B4Q9UN42 357 aaPredicted RBP19.56■□□□□ 0.72
SCRN3-206ENST00000437944 EPRSP07814 1512 aaKnown RBP19.56■□□□□ 0.72
SCRN3-206ENST00000437944 MAP3K1Q13233 1512 aa19.56■□□□□ 0.72
SCRN3-206ENST00000437944 CFAP43Q8NDM7 1665 aa19.53■□□□□ 0.72
SCRN3-206ENST00000437944 KDM5BQ9UGL1 1544 aa19.53■□□□□ 0.72
SCRN3-206ENST00000437944 ATP10BO94823 1461 aa19.53■□□□□ 0.72
SCRN3-206ENST00000437944 TIAM1Q13009 1591 aa19.52■□□□□ 0.71
SCRN3-206ENST00000437944 ZCCHC11Q5TAX3 1644 aaKnown RBP19.51■□□□□ 0.71
SCRN3-206ENST00000437944 APLP2Q06481 763 aa19.5■□□□□ 0.71
SCRN3-206ENST00000437944 CDK13Q14004 1512 aaKnown RBP19.5■□□□□ 0.71
SCRN3-206ENST00000437944 ARID3CA6NKF2 412 aa19.46■□□□□ 0.71
SCRN3-206ENST00000437944 NPM1P06748 294 aaKnown RBP eCLIP19.44■□□□□ 0.7
SCRN3-206ENST00000437944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.43■□□□□ 0.7
SCRN3-206ENST00000437944 HNRNPUL2Q1KMD3 747 aaKnown RBP19.43■□□□□ 0.7
SCRN3-206ENST00000437944 CDK11AQ9UQ88 783 aaPredicted RBP19.43■□□□□ 0.7
SCRN3-206ENST00000437944 LRRC9Q6ZRR7 1453 aa19.41■□□□□ 0.7
SCRN3-206ENST00000437944 MAGI3Q5TCQ9 1506 aa19.41■□□□□ 0.7
SCRN3-206ENST00000437944 EHBP1L1Q8N3D4 1523 aa19.39■□□□□ 0.69
SCRN3-206ENST00000437944 PLEKHD1A6NEE1 506 aa19.38■□□□□ 0.69
SCRN3-206ENST00000437944 MAPKBP1O60336 1514 aa19.38■□□□□ 0.69
SCRN3-206ENST00000437944 KANK4Q5T7N3 995 aaPredicted RBP19.38■□□□□ 0.69
SCRN3-206ENST00000437944 TROQ12816 1431 aaPredicted RBP19.37■□□□□ 0.69
SCRN3-206ENST00000437944 MTUS2Q5JR59 1369 aa19.37■□□□□ 0.69
SCRN3-206ENST00000437944 ASXL2Q76L83 1435 aa19.35■□□□□ 0.69
SCRN3-206ENST00000437944 WDR7Q9Y4E6 1490 aa19.34■□□□□ 0.69
SCRN3-206ENST00000437944 SUPT6HQ7KZ85 1726 aaKnown RBP19.33■□□□□ 0.68
SCRN3-206ENST00000437944 KIF14Q15058 1648 aa19.3■□□□□ 0.68
SCRN3-206ENST00000437944 PPARGC1BQ86YN6 1023 aaKnown RBP19.28■□□□□ 0.68
SCRN3-206ENST00000437944 NCOA2Q15596 1464 aa19.27■□□□□ 0.67
SCRN3-206ENST00000437944 ABCC10Q5T3U5 1492 aa19.24■□□□□ 0.67
SCRN3-206ENST00000437944 KCNH8Q96L42 1107 aa19.24■□□□□ 0.67
SCRN3-206ENST00000437944 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.23■□□□□ 0.67
SCRN3-206ENST00000437944 ABCA9Q8IUA7 1624 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms