RNA–Protein interactions for RNA: ENST00000436712.2

GAPVD1-209, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-209ENST00000436712 TOPBP1Q92547 1522 aa11.4□□□□□ -0.58
GAPVD1-209ENST00000436712 ERCC6Q03468 1493 aa11.4□□□□□ -0.58
GAPVD1-209ENST00000436712 FANCIQ9NVI1 1328 aa11.4□□□□□ -0.59
GAPVD1-209ENST00000436712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.4□□□□□ -0.59
GAPVD1-209ENST00000436712 DNMBPQ6XZF7 1577 aa11.38□□□□□ -0.59
GAPVD1-209ENST00000436712 RAD54L2Q9Y4B4 1467 aa11.38□□□□□ -0.59
GAPVD1-209ENST00000436712 POLA1P09884 1462 aaPredicted RBP11.35□□□□□ -0.59
GAPVD1-209ENST00000436712 CUX2O14529 1486 aa11.34□□□□□ -0.59
GAPVD1-209ENST00000436712 MRC2Q9UBG0 1479 aa11.32□□□□□ -0.6
GAPVD1-209ENST00000436712 NEFLP07196 543 aa11.32□□□□□ -0.6
GAPVD1-209ENST00000436712 RANGAP1P46060 587 aaPredicted RBP11.3□□□□□ -0.6
GAPVD1-209ENST00000436712 UBTFP17480 764 aaKnown RBP11.29□□□□□ -0.6
GAPVD1-209ENST00000436712 EEA1Q15075 1411 aa11.29□□□□□ -0.6
GAPVD1-209ENST00000436712 KIF27Q86VH2 1401 aa11.29□□□□□ -0.6
GAPVD1-209ENST00000436712 IL27Q8NEV9 243 aa11.28□□□□□ -0.6
GAPVD1-209ENST00000436712 TDRD9Q8NDG6 1382 aaKnown RBP11.27□□□□□ -0.6
GAPVD1-209ENST00000436712 THOC2Q8NI27 1593 aaKnown RBP11.27□□□□□ -0.61
GAPVD1-209ENST00000436712 RAPGEF2Q9Y4G8 1499 aa11.26□□□□□ -0.61
GAPVD1-209ENST00000436712 WDR62O43379 1518 aa11.25□□□□□ -0.61
GAPVD1-209ENST00000436712 GLIPR1L2Q4G1C9 344 aa11.24□□□□□ -0.61
GAPVD1-209ENST00000436712 ABCA10Q8WWZ4 1543 aa11.24□□□□□ -0.61
GAPVD1-209ENST00000436712 GOLGA3Q08378 1498 aa11.23□□□□□ -0.61
GAPVD1-209ENST00000436712 WDR97A6NE52 1622 aa11.23□□□□□ -0.61
GAPVD1-209ENST00000436712 RTN4Q9NQC3 1192 aaKnown RBP11.22□□□□□ -0.61
GAPVD1-209ENST00000436712 TARBP1Q13395 1621 aaKnown RBP11.22□□□□□ -0.61
GAPVD1-209ENST00000436712 KIF21BO75037 1637 aa11.21□□□□□ -0.62
GAPVD1-209ENST00000436712 AQRO60306 1485 aaKnown RBP eCLIP11.21□□□□□ -0.621e-6■■□□□ 12.3
GAPVD1-209ENST00000436712 BCANQ96GW7 911 aa11.2□□□□□ -0.62
GAPVD1-209ENST00000436712 ZMYND15Q9H091 742 aa11.2□□□□□ -0.62
GAPVD1-209ENST00000436712 ZNF608Q9ULD9 1512 aaPredicted RBP11.2□□□□□ -0.62
GAPVD1-209ENST00000436712 IGF1RP08069 1367 aa11.2□□□□□ -0.62
GAPVD1-209ENST00000436712 GAPVD1Q14C86 1478 aa11.18□□□□□ -0.62
GAPVD1-209ENST00000436712 PRXQ9BXM0 1461 aa11.18□□□□□ -0.62
GAPVD1-209ENST00000436712 ABCA5Q8WWZ7 1642 aa11.18□□□□□ -0.62
GAPVD1-209ENST00000436712 PDE4CQ08493 712 aa11.17□□□□□ -0.62
GAPVD1-209ENST00000436712 CEP162Q5TB80 1403 aa11.17□□□□□ -0.62
GAPVD1-209ENST00000436712 CARMIL1Q5VZK9 1371 aa11.16□□□□□ -0.62
GAPVD1-209ENST00000436712 FKBP8Q14318 412 aa11.16□□□□□ -0.62
GAPVD1-209ENST00000436712 TNIKQ9UKE5 1360 aa11.15□□□□□ -0.62
GAPVD1-209ENST00000436712 IFT140Q96RY7 1462 aa11.15□□□□□ -0.63
GAPVD1-209ENST00000436712 PBRM1Q86U86 1689 aa11.14□□□□□ -0.63
GAPVD1-209ENST00000436712 PDIA4P13667 645 aaKnown RBP11.14□□□□□ -0.63
GAPVD1-209ENST00000436712 FGD1P98174 961 aa11.14□□□□□ -0.63
GAPVD1-209ENST00000436712 EIF4G3O43432 1585 aaKnown RBP11.13□□□□□ -0.63
GAPVD1-209ENST00000436712 ERICH3Q5RHP9 1530 aa11.12□□□□□ -0.63
GAPVD1-209ENST00000436712 VSIG10Q8N0Z9 540 aa11.1□□□□□ -0.63
GAPVD1-209ENST00000436712 RSPH6AQ9H0K4 717 aa11.1□□□□□ -0.63
GAPVD1-209ENST00000436712 C11orf95C9JLR9 678 aaPredicted RBP11.1□□□□□ -0.63
GAPVD1-209ENST00000436712 CUL7Q14999 1698 aa11.09□□□□□ -0.63
GAPVD1-209ENST00000436712 NBR1Q14596 966 aa11.09□□□□□ -0.63
GAPVD1-209ENST00000436712 CLIP1P30622 1438 aa11.09□□□□□ -0.63
GAPVD1-209ENST00000436712 FBLN2P98095 1184 aa11.08□□□□□ -0.64
GAPVD1-209ENST00000436712 AAMPQ13685 434 aa11.08□□□□□ -0.64
GAPVD1-209ENST00000436712 GRIN2BQ13224 1484 aa11.07□□□□□ -0.64
GAPVD1-209ENST00000436712 SNAPC4Q5SXM2 1469 aa11.07□□□□□ -0.64
GAPVD1-209ENST00000436712 RTL5Q5HYW3 569 aaPredicted RBP11.07□□□□□ -0.64
GAPVD1-209ENST00000436712 NOP58Q9Y2X3 529 aaKnown RBP11.06□□□□□ -0.64
GAPVD1-209ENST00000436712 P3H3Q8IVL6 736 aa11.06□□□□□ -0.64
GAPVD1-209ENST00000436712 ADAMTS12P58397 1594 aa11.05□□□□□ -0.64
GAPVD1-209ENST00000436712 A0A0U1RQG5 324 aaPredicted RBP11.04□□□□□ -0.64
GAPVD1-209ENST00000436712 ITGAEP38570 1179 aa11.04□□□□□ -0.64
GAPVD1-209ENST00000436712 CDK11AQ9UQ88 783 aaPredicted RBP11.04□□□□□ -0.64
GAPVD1-209ENST00000436712 TIMELESSQ9UNS1 1208 aa11.03□□□□□ -0.64
GAPVD1-209ENST00000436712 RBM10P98175 930 aaKnown RBP11.03□□□□□ -0.64
GAPVD1-209ENST00000436712 FHAD1B1AJZ9 1412 aa11.02□□□□□ -0.65
GAPVD1-209ENST00000436712 CTTNBP2Q8WZ74 1663 aa11.01□□□□□ -0.65
GAPVD1-209ENST00000436712 NCBP3Q53F19 620 aaKnown RBP11□□□□□ -0.65
GAPVD1-209ENST00000436712 CHMP7Q8WUX9 453 aaPredicted RBP10.99□□□□□ -0.65
GAPVD1-209ENST00000436712 BCL11BQ9C0K0 894 aaPredicted RBP10.99□□□□□ -0.65
GAPVD1-209ENST00000436712 ARAP1Q96P48 1450 aa10.99□□□□□ -0.65
GAPVD1-209ENST00000436712 ARHGAP35Q9NRY4 1499 aa10.98□□□□□ -0.65
GAPVD1-209ENST00000436712 WASHC2AQ641Q2 1341 aa10.98□□□□□ -0.65
GAPVD1-209ENST00000436712 WASHC2CQ9Y4E1 1318 aa10.98□□□□□ -0.65
GAPVD1-209ENST00000436712 KLHL34Q8N239 644 aa10.97□□□□□ -0.65
GAPVD1-209ENST00000436712 GRIN2AQ12879 1464 aa10.96□□□□□ -0.65
GAPVD1-209ENST00000436712 MAGI1Q96QZ7 1491 aaPredicted RBP10.96□□□□□ -0.66
GAPVD1-209ENST00000436712 FHOD3Q2V2M9 1422 aa10.96□□□□□ -0.66
GAPVD1-209ENST00000436712 PAK3O75914 559 aaPredicted RBP10.95□□□□□ -0.66
GAPVD1-209ENST00000436712 ATP1B4Q9UN42 357 aaPredicted RBP10.95□□□□□ -0.66
GAPVD1-209ENST00000436712 SYNJ2O15056 1496 aa10.94□□□□□ -0.66
GAPVD1-209ENST00000436712 VPS8Q8N3P4 1428 aa10.94□□□□□ -0.66
GAPVD1-209ENST00000436712 TAF7LQ5H9L4 462 aa10.94□□□□□ -0.66
GAPVD1-209ENST00000436712 HNRNPUL2Q1KMD3 747 aaKnown RBP10.93□□□□□ -0.66
GAPVD1-209ENST00000436712 CHD1O14646 1710 aa10.93□□□□□ -0.66
GAPVD1-209ENST00000436712 ARXQ96QS3 562 aa10.93□□□□□ -0.66
GAPVD1-209ENST00000436712 CEP170Q5SW79 1584 aa10.93□□□□□ -0.66
GAPVD1-209ENST00000436712 IQGAP2Q13576 1575 aa10.92□□□□□ -0.66
GAPVD1-209ENST00000436712 USP35Q9P2H5 1018 aa10.89□□□□□ -0.67
GAPVD1-209ENST00000436712 BRPF3Q9ULD4 1205 aa10.89□□□□□ -0.67
GAPVD1-209ENST00000436712 ARID3CA6NKF2 412 aa10.88□□□□□ -0.67
GAPVD1-209ENST00000436712 DNAJC5Q9H3Z4 198 aa10.87□□□□□ -0.67
GAPVD1-209ENST00000436712 PCF11O94913 1555 aaKnown RBP10.87□□□□□ -0.67
GAPVD1-209ENST00000436712 RRP9O43818 475 aaKnown RBP10.86□□□□□ -0.67
GAPVD1-209ENST00000436712 FAM43AQ8N2R8 423 aa10.86□□□□□ -0.67
GAPVD1-209ENST00000436712 EFCAB5A4FU69 1503 aa10.86□□□□□ -0.67
GAPVD1-209ENST00000436712 SAMD9Q5K651 1589 aa10.86□□□□□ -0.67
GAPVD1-209ENST00000436712 KIAA0586Q9BVV6 1533 aa10.85□□□□□ -0.67
GAPVD1-209ENST00000436712 NUP160Q12769 1436 aa10.84□□□□□ -0.67
GAPVD1-209ENST00000436712 HSP90AA2PQ14568 343 aaPredicted RBP10.83□□□□□ -0.68
GAPVD1-209ENST00000436712 KANK4Q5T7N3 995 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms