RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 ANO8Q9HCE9 1232 aaPredicted RBP17.65■□□□□ 0.42
SEMA3F-206ENST00000434342 RRBP1Q9P2E9 1410 aaKnown RBP17.64■□□□□ 0.41
SEMA3F-206ENST00000434342 FANCD2Q9BXW9 1451 aa17.6■□□□□ 0.41
SEMA3F-206ENST00000434342 SUPT16HQ9Y5B9 1047 aaKnown RBP17.59■□□□□ 0.41
SEMA3F-206ENST00000434342 RAD54L2Q9Y4B4 1467 aa17.59■□□□□ 0.41
SEMA3F-206ENST00000434342 CC2D2AQ9P2K1 1620 aa17.57■□□□□ 0.4
SEMA3F-206ENST00000434342 RAB3GAP2Q9H2M9 1393 aa17.56■□□□□ 0.4
SEMA3F-206ENST00000434342 NESP48681 1621 aa17.54■□□□□ 0.4
SEMA3F-206ENST00000434342 BCANQ96GW7 911 aa17.53■□□□□ 0.4
SEMA3F-206ENST00000434342 PHLDB1Q86UU1 1377 aa17.53■□□□□ 0.4
SEMA3F-206ENST00000434342 FHOD3Q2V2M9 1422 aa17.52■□□□□ 0.4
SEMA3F-206ENST00000434342 SIN3AQ96ST3 1273 aa17.51■□□□□ 0.39
SEMA3F-206ENST00000434342 FHAD1B1AJZ9 1412 aa17.49■□□□□ 0.39
SEMA3F-206ENST00000434342 LRRC9Q6ZRR7 1453 aa17.48■□□□□ 0.39
SEMA3F-206ENST00000434342 TDRD9Q8NDG6 1382 aaKnown RBP17.47■□□□□ 0.39
SEMA3F-206ENST00000434342 TIAM1Q13009 1591 aa17.47■□□□□ 0.39
SEMA3F-206ENST00000434342 DNAJC5BQ9UF47 199 aa17.46■□□□□ 0.39
SEMA3F-206ENST00000434342 SETD5Q9C0A6 1442 aa17.46■□□□□ 0.39
SEMA3F-206ENST00000434342 CCDC136Q96JN2 1154 aa17.46■□□□□ 0.38
SEMA3F-206ENST00000434342 POLA1P09884 1462 aaPredicted RBP17.46■□□□□ 0.38
SEMA3F-206ENST00000434342 TOPBP1Q92547 1522 aa17.43■□□□□ 0.38
SEMA3F-206ENST00000434342 HIRIP3Q9BW71 556 aaPredicted RBP17.41■□□□□ 0.38
SEMA3F-206ENST00000434342 PRDM2Q13029 1718 aa17.4■□□□□ 0.38
SEMA3F-206ENST00000434342 ABCA10Q8WWZ4 1543 aa17.39■□□□□ 0.37
SEMA3F-206ENST00000434342 DNMBPQ6XZF7 1577 aa17.38■□□□□ 0.37
SEMA3F-206ENST00000434342 DDX10Q13206 875 aaKnown RBP17.37■□□□□ 0.37
SEMA3F-206ENST00000434342 MAP3K1Q13233 1512 aa17.37■□□□□ 0.37
SEMA3F-206ENST00000434342 MTUS2Q5JR59 1369 aa17.37■□□□□ 0.37
SEMA3F-206ENST00000434342 PCF11O94913 1555 aaKnown RBP17.36■□□□□ 0.37
SEMA3F-206ENST00000434342 KCNH8Q96L42 1107 aa17.35■□□□□ 0.37
SEMA3F-206ENST00000434342 ARID3CA6NKF2 412 aa17.34■□□□□ 0.37
SEMA3F-206ENST00000434342 SALL2Q9Y467 1007 aaPredicted RBP17.34■□□□□ 0.37
SEMA3F-206ENST00000434342 MAPKBP1O60336 1514 aa17.33■□□□□ 0.36
SEMA3F-206ENST00000434342 CASKIN1Q8WXD9 1431 aa17.31■□□□□ 0.36
SEMA3F-206ENST00000434342 URB2Q14146 1524 aaKnown RBP17.3■□□□□ 0.36
SEMA3F-206ENST00000434342 FMN1Q68DA7 1419 aa17.29■□□□□ 0.36
SEMA3F-206ENST00000434342 FYCO1Q9BQS8 1478 aa17.28■□□□□ 0.36
SEMA3F-206ENST00000434342 RBM19Q9Y4C8 960 aaKnown RBP17.27■□□□□ 0.36
SEMA3F-206ENST00000434342 CHIC2Q9UKJ5 165 aa17.27■□□□□ 0.35
SEMA3F-206ENST00000434342 GAPVD1Q14C86 1478 aa17.26■□□□□ 0.35
SEMA3F-206ENST00000434342 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
SEMA3F-206ENST00000434342 PPP1R15AO75807 674 aaPredicted RBP17.25■□□□□ 0.35
SEMA3F-206ENST00000434342 FGD6Q6ZV73 1430 aa17.24■□□□□ 0.35
SEMA3F-206ENST00000434342 EFCAB5A4FU69 1503 aa17.23■□□□□ 0.35
SEMA3F-206ENST00000434342 RRP7BPQ9NSQ0 103 aa17.23■□□□□ 0.35
SEMA3F-206ENST00000434342 WDR97A6NE52 1622 aa17.22■□□□□ 0.35
SEMA3F-206ENST00000434342 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.22■□□□□ 0.35
SEMA3F-206ENST00000434342 TONSLQ96HA7 1378 aa17.22■□□□□ 0.35
SEMA3F-206ENST00000434342 MSH5O43196 834 aa17.21■□□□□ 0.35
SEMA3F-206ENST00000434342 TRIM52Q96A61 297 aa17.2■□□□□ 0.34
SEMA3F-206ENST00000434342 AQRO60306 1485 aaKnown RBP eCLIP17.19■□□□□ 0.34
SEMA3F-206ENST00000434342 TIMELESSQ9UNS1 1208 aa17.19■□□□□ 0.34
SEMA3F-206ENST00000434342 CUL7Q14999 1698 aa17.19■□□□□ 0.34
SEMA3F-206ENST00000434342 CFAP43Q8NDM7 1665 aa17.18■□□□□ 0.34
SEMA3F-206ENST00000434342 DEKP35659 375 aaKnown RBP17.18■□□□□ 0.34
SEMA3F-206ENST00000434342 PTPRKQ15262 1439 aa17.17■□□□□ 0.34
SEMA3F-206ENST00000434342 LAMC3Q9Y6N6 1575 aa17.17■□□□□ 0.34
SEMA3F-206ENST00000434342 SNAPC4Q5SXM2 1469 aa17.16■□□□□ 0.34
SEMA3F-206ENST00000434342 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.15■□□□□ 0.34
SEMA3F-206ENST00000434342 RTN4Q9NQC3 1192 aaKnown RBP17.15■□□□□ 0.34
SEMA3F-206ENST00000434342 NCOA2Q15596 1464 aa17.15■□□□□ 0.34
SEMA3F-206ENST00000434342 CCDC18Q5T9S5 1454 aa17.14■□□□□ 0.33
SEMA3F-206ENST00000434342 ANP32CO43423 234 aa17.13■□□□□ 0.33
SEMA3F-206ENST00000434342 MYOM3Q5VTT5 1437 aa17.12■□□□□ 0.33
SEMA3F-206ENST00000434342 FKBP8Q14318 412 aa17.12■□□□□ 0.33
SEMA3F-206ENST00000434342 CTTNBP2Q8WZ74 1663 aa17.1■□□□□ 0.33
SEMA3F-206ENST00000434342 HFM1A2PYH4 1435 aa17.09■□□□□ 0.33
SEMA3F-206ENST00000434342 NAIPQ13075 1403 aa17.07■□□□□ 0.32
SEMA3F-206ENST00000434342 UACAQ9BZF9 1416 aa17.07■□□□□ 0.32
SEMA3F-206ENST00000434342 GRIN2BQ13224 1484 aa17.07■□□□□ 0.32
SEMA3F-206ENST00000434342 FOXD1Q16676 465 aa17.07■□□□□ 0.32
SEMA3F-206ENST00000434342 ABCA5Q8WWZ7 1642 aa17.06■□□□□ 0.32
SEMA3F-206ENST00000434342 FBLN2P98095 1184 aa17.02■□□□□ 0.31
SEMA3F-206ENST00000434342 SAMD9Q5K651 1589 aa17.02■□□□□ 0.31
SEMA3F-206ENST00000434342 NBR1Q14596 966 aa17■□□□□ 0.31
SEMA3F-206ENST00000434342 UBE2Q2Q8WVN8 375 aa17■□□□□ 0.31
SEMA3F-206ENST00000434342 KIF21AQ7Z4S6 1674 aa16.99■□□□□ 0.31
SEMA3F-206ENST00000434342 MPHOSPH9Q99550 1183 aa16.99■□□□□ 0.31
SEMA3F-206ENST00000434342 PTPN23Q9H3S7 1636 aa16.99■□□□□ 0.31
SEMA3F-206ENST00000434342 MAGI3Q5TCQ9 1506 aa16.99■□□□□ 0.31
SEMA3F-206ENST00000434342 EHBP1L1Q8N3D4 1523 aa16.98■□□□□ 0.31
SEMA3F-206ENST00000434342 ZNF644Q9H582 1327 aaPredicted RBP16.97■□□□□ 0.31
SEMA3F-206ENST00000434342 CDK13Q14004 1512 aaKnown RBP16.97■□□□□ 0.31
SEMA3F-206ENST00000434342 CCER2I3L3R5 266 aa16.96■□□□□ 0.31
SEMA3F-206ENST00000434342 SUPT6HQ7KZ85 1726 aaKnown RBP16.96■□□□□ 0.31
SEMA3F-206ENST00000434342 HSPA5P11021 654 aaKnown RBP16.96■□□□□ 0.31
SEMA3F-206ENST00000434342 EPRSP07814 1512 aaKnown RBP16.96■□□□□ 0.3
SEMA3F-206ENST00000434342 NEFLP07196 543 aa16.95■□□□□ 0.3
SEMA3F-206ENST00000434342 ZNF777Q9ULD5 760 aaPredicted RBP16.95■□□□□ 0.3
SEMA3F-206ENST00000434342 TARBP1Q13395 1621 aaKnown RBP16.95■□□□□ 0.3
SEMA3F-206ENST00000434342 UGGT2Q9NYU1 1516 aa16.94■□□□□ 0.3
SEMA3F-206ENST00000434342 ZNF608Q9ULD9 1512 aaPredicted RBP16.94■□□□□ 0.3
SEMA3F-206ENST00000434342 L3MBTL2Q969R5 705 aa16.94■□□□□ 0.3
SEMA3F-206ENST00000434342 IL27Q8NEV9 243 aa16.93■□□□□ 0.3
SEMA3F-206ENST00000434342 LRRIQ1Q96JM4 1722 aa16.93■□□□□ 0.3
SEMA3F-206ENST00000434342 EIF5BO60841 1220 aaKnown RBP16.92■□□□□ 0.3
SEMA3F-206ENST00000434342 CDK11AQ9UQ88 783 aaPredicted RBP16.92■□□□□ 0.3
SEMA3F-206ENST00000434342 IQGAP2Q13576 1575 aa16.92■□□□□ 0.3
SEMA3F-206ENST00000434342 EIF4G2P78344 907 aaKnown RBP eCLIP16.92■□□□□ 0.3
SEMA3F-206ENST00000434342 CHMP7Q8WUX9 453 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 181.4 ms