RNA–Protein interactions for RNA: ENST00000433272.6

LRIG3-203, Transcript of leucine rich repeats and immunoglobulin like domains 3, humanhuman

TSL 1 (best)

Gene LRIG3, Length 3,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG3-203ENST00000433272 CADPSQ9ULU8 1353 aa22.38■■□□□ 1.17
LRIG3-203ENST00000433272 BCL11AQ9H165 835 aa22.37■■□□□ 1.17
LRIG3-203ENST00000433272 IGF1RP08069 1367 aa22.36■■□□□ 1.17
LRIG3-203ENST00000433272 IRX6P78412 446 aaPredicted RBP22.34■■□□□ 1.17
LRIG3-203ENST00000433272 CFTRP13569 1480 aa22.33■■□□□ 1.17
LRIG3-203ENST00000433272 CLSPNQ9HAW4 1339 aa22.31■■□□□ 1.16
LRIG3-203ENST00000433272 ARHGAP35Q9NRY4 1499 aa22.28■■□□□ 1.16
LRIG3-203ENST00000433272 RAB3GAP2Q9H2M9 1393 aa22.27■■□□□ 1.16
LRIG3-203ENST00000433272 FGD5Q6ZNL6 1462 aa22.27■■□□□ 1.16
LRIG3-203ENST00000433272 CHIC2Q9UKJ5 165 aa22.27■■□□□ 1.16
LRIG3-203ENST00000433272 ANP32CO43423 234 aa22.25■■□□□ 1.15
LRIG3-203ENST00000433272 RAD54L2Q9Y4B4 1467 aa22.24■■□□□ 1.15
LRIG3-203ENST00000433272 FHOD3Q2V2M9 1422 aa22.24■■□□□ 1.15
LRIG3-203ENST00000433272 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
LRIG3-203ENST00000433272 HMGXB3Q12766 1538 aa22.22■■□□□ 1.15
LRIG3-203ENST00000433272 ERICH3Q5RHP9 1530 aa22.22■■□□□ 1.15
LRIG3-203ENST00000433272 DNAJC5BQ9UF47 199 aa22.19■■□□□ 1.14
LRIG3-203ENST00000433272 MTUS2Q5JR59 1369 aa22.18■■□□□ 1.14
LRIG3-203ENST00000433272 RBM19Q9Y4C8 960 aaKnown RBP22.18■■□□□ 1.14
LRIG3-203ENST00000433272 NESP48681 1621 aa22.17■■□□□ 1.14
LRIG3-203ENST00000433272 FANCD2Q9BXW9 1451 aa22.17■■□□□ 1.14
LRIG3-203ENST00000433272 BIVM-ERCC5R4GMW8 1640 aa22.17■■□□□ 1.14
LRIG3-203ENST00000433272 RRP7BPQ9NSQ0 103 aa22.14■■□□□ 1.13
LRIG3-203ENST00000433272 PHLDB1Q86UU1 1377 aa22.14■■□□□ 1.13
LRIG3-203ENST00000433272 HNRNPUQ00839 825 aaKnown RBP eCLIP22.11■■□□□ 1.13
LRIG3-203ENST00000433272 CDK11AQ9UQ88 783 aaPredicted RBP22.11■■□□□ 1.13
LRIG3-203ENST00000433272 FBLN2P98095 1184 aa22.1■■□□□ 1.13
LRIG3-203ENST00000433272 SETD5Q9C0A6 1442 aa22.09■■□□□ 1.13
LRIG3-203ENST00000433272 FHAD1B1AJZ9 1412 aa22.07■■□□□ 1.12
LRIG3-203ENST00000433272 RRBP1Q9P2E9 1410 aaKnown RBP22.06■■□□□ 1.12
LRIG3-203ENST00000433272 POLR3GLQ9BT43 218 aa22.05■■□□□ 1.12
LRIG3-203ENST00000433272 TONSLQ96HA7 1378 aa22.05■■□□□ 1.12
LRIG3-203ENST00000433272 CC2D2AQ9P2K1 1620 aa22.05■■□□□ 1.12
LRIG3-203ENST00000433272 LRRC9Q6ZRR7 1453 aa21.98■■□□□ 1.11
LRIG3-203ENST00000433272 SENP3-EIF4A1A0A087X0R7 540 aa21.98■■□□□ 1.11
LRIG3-203ENST00000433272 NBR1Q14596 966 aa21.95■■□□□ 1.1
LRIG3-203ENST00000433272 ZNF777Q9ULD5 760 aaPredicted RBP21.94■■□□□ 1.1
LRIG3-203ENST00000433272 ZNF326Q5BKZ1 582 aaKnown RBP21.93■■□□□ 1.1
LRIG3-203ENST00000433272 POLA1P09884 1462 aaPredicted RBP21.92■■□□□ 1.1
LRIG3-203ENST00000433272 FOXD1Q16676 465 aa21.92■■□□□ 1.1
LRIG3-203ENST00000433272 FAM9BQ8IZU0 186 aa21.91■■□□□ 1.1
LRIG3-203ENST00000433272 TIAM1Q13009 1591 aa21.9■■□□□ 1.1
LRIG3-203ENST00000433272 TOPBP1Q92547 1522 aa21.88■■□□□ 1.09
LRIG3-203ENST00000433272 PPP1R15AO75807 674 aaPredicted RBP21.85■■□□□ 1.09
LRIG3-203ENST00000433272 FMN1Q68DA7 1419 aa21.82■■□□□ 1.08
LRIG3-203ENST00000433272 PCF11O94913 1555 aaKnown RBP21.81■■□□□ 1.08
LRIG3-203ENST00000433272 B4GALNT3Q6L9W6 998 aa21.78■■□□□ 1.08
LRIG3-203ENST00000433272 GAPVD1Q14C86 1478 aa21.77■■□□□ 1.08
LRIG3-203ENST00000433272 PDS5BQ9NTI5 1447 aa21.76■■□□□ 1.07
LRIG3-203ENST00000433272 WDR97A6NE52 1622 aa21.75■■□□□ 1.07
LRIG3-203ENST00000433272 FGD6Q6ZV73 1430 aa21.74■■□□□ 1.07
LRIG3-203ENST00000433272 AQRO60306 1485 aaKnown RBP eCLIP21.73■■□□□ 1.07
LRIG3-203ENST00000433272 CASKIN1Q8WXD9 1431 aa21.72■■□□□ 1.07
LRIG3-203ENST00000433272 DNMBPQ6XZF7 1577 aa21.72■■□□□ 1.07
LRIG3-203ENST00000433272 RTL5Q5HYW3 569 aaPredicted RBP21.7■■□□□ 1.07
LRIG3-203ENST00000433272 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.06
LRIG3-203ENST00000433272 CHMP7Q8WUX9 453 aaPredicted RBP21.7■■□□□ 1.06
LRIG3-203ENST00000433272 MAPKBP1O60336 1514 aa21.7■■□□□ 1.06
LRIG3-203ENST00000433272 MSH5O43196 834 aa21.69■■□□□ 1.06
LRIG3-203ENST00000433272 SLC4A1APQ9BWU0 796 aaKnown RBP21.69■■□□□ 1.06
LRIG3-203ENST00000433272 CCDC18Q5T9S5 1454 aa21.69■■□□□ 1.06
LRIG3-203ENST00000433272 NPM2Q86SE8 214 aaKnown RBP21.68■■□□□ 1.06
LRIG3-203ENST00000433272 URB2Q14146 1524 aaKnown RBP21.67■■□□□ 1.06
LRIG3-203ENST00000433272 MRS2Q9HD23 443 aa21.66■■□□□ 1.06
LRIG3-203ENST00000433272 FYCO1Q9BQS8 1478 aa21.66■■□□□ 1.06
LRIG3-203ENST00000433272 ZNF644Q9H582 1327 aaPredicted RBP21.64■■□□□ 1.06
LRIG3-203ENST00000433272 HSPA5P11021 654 aaKnown RBP21.64■■□□□ 1.05
LRIG3-203ENST00000433272 CCER2I3L3R5 266 aa21.63■■□□□ 1.05
LRIG3-203ENST00000433272 NCOA2Q15596 1464 aa21.63■■□□□ 1.05
LRIG3-203ENST00000433272 DEKP35659 375 aaKnown RBP21.62■■□□□ 1.05
LRIG3-203ENST00000433272 EIF4G2P78344 907 aaKnown RBP eCLIP21.62■■□□□ 1.05
LRIG3-203ENST00000433272 TIMELESSQ9UNS1 1208 aa21.62■■□□□ 1.05
LRIG3-203ENST00000433272 MPHOSPH9Q99550 1183 aa21.61■■□□□ 1.05
LRIG3-203ENST00000433272 PTPRKQ15262 1439 aa21.59■■□□□ 1.05
LRIG3-203ENST00000433272 L3MBTL2Q969R5 705 aa21.59■■□□□ 1.05
LRIG3-203ENST00000433272 CFDP1Q9UEE9 299 aaPredicted RBP21.58■■□□□ 1.05
LRIG3-203ENST00000433272 MYOM3Q5VTT5 1437 aa21.58■■□□□ 1.04
LRIG3-203ENST00000433272 SALL2Q9Y467 1007 aaPredicted RBP21.58■■□□□ 1.04
LRIG3-203ENST00000433272 KDM2AQ9Y2K7 1162 aa21.56■■□□□ 1.04
LRIG3-203ENST00000433272 MAP3K1Q13233 1512 aa21.55■■□□□ 1.04
LRIG3-203ENST00000433272 RTN4Q9NQC3 1192 aaKnown RBP21.54■■□□□ 1.04
LRIG3-203ENST00000433272 PPP4R2Q9NY27 417 aa21.54■■□□□ 1.04
LRIG3-203ENST00000433272 EFCAB5A4FU69 1503 aa21.53■■□□□ 1.04
LRIG3-203ENST00000433272 ANP32AP39687 249 aaKnown RBP21.53■■□□□ 1.04
LRIG3-203ENST00000433272 CCDC136Q96JN2 1154 aa21.53■■□□□ 1.04
LRIG3-203ENST00000433272 UACAQ9BZF9 1416 aa21.51■■□□□ 1.03
LRIG3-203ENST00000433272 PRDM2Q13029 1718 aa21.5■■□□□ 1.03
LRIG3-203ENST00000433272 NAIPQ13075 1403 aa21.49■■□□□ 1.03
LRIG3-203ENST00000433272 CDK13Q14004 1512 aaKnown RBP21.47■■□□□ 1.03
LRIG3-203ENST00000433272 HFM1A2PYH4 1435 aa21.46■■□□□ 1.03
LRIG3-203ENST00000433272 NOP58Q9Y2X3 529 aaKnown RBP21.45■■□□□ 1.03
LRIG3-203ENST00000433272 ERCC6Q03468 1493 aa21.45■■□□□ 1.02
LRIG3-203ENST00000433272 ZBTB47Q9UFB7 747 aaPredicted RBP21.44■■□□□ 1.02
LRIG3-203ENST00000433272 CUL7Q14999 1698 aa21.44■■□□□ 1.02
LRIG3-203ENST00000433272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.44■■□□□ 1.02
LRIG3-203ENST00000433272 CCDC184Q52MB2 194 aa21.42■■□□□ 1.02
LRIG3-203ENST00000433272 WASHC2AQ641Q2 1341 aa21.41■■□□□ 1.02
LRIG3-203ENST00000433272 SNAPC4Q5SXM2 1469 aa21.41■■□□□ 1.02
LRIG3-203ENST00000433272 LAMC3Q9Y6N6 1575 aa21.41■■□□□ 1.02
LRIG3-203ENST00000433272 PLEKHD1A6NEE1 506 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms